RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 LTBP3Q9NS15 1303 aa9.23□□□□□ -0.93
PMS1-208ENST00000421722 ZPR1O75312 459 aa9.23□□□□□ -0.93
PMS1-208ENST00000421722 INTS5Q6P9B9 1019 aaKnown RBP9.22□□□□□ -0.93
PMS1-208ENST00000421722 AFDNP55196 1824 aaKnown RBP9.22□□□□□ -0.93
PMS1-208ENST00000421722 VIRMAQ69YN4 1812 aaKnown RBP9.22□□□□□ -0.93
PMS1-208ENST00000421722 SOS1Q07889 1333 aaPredicted RBP9.22□□□□□ -0.93
PMS1-208ENST00000421722 NFKBIEO00221 500 aa9.22□□□□□ -0.93
PMS1-208ENST00000421722 C2CD5Q86YS7 1000 aa9.22□□□□□ -0.93
PMS1-208ENST00000421722 NARFQ9UHQ1 456 aa9.22□□□□□ -0.93
PMS1-208ENST00000421722 H0YIN7 160 aa9.21□□□□□ -0.93
PMS1-208ENST00000421722 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.93
PMS1-208ENST00000421722 POLKQ9UBT6 870 aa9.21□□□□□ -0.93
PMS1-208ENST00000421722 UTRNP46939 3433 aa9.21□□□□□ -0.93
PMS1-208ENST00000421722 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.93
PMS1-208ENST00000421722 PASKQ96RG2 1323 aa9.21□□□□□ -0.93
PMS1-208ENST00000421722 RGS19P49795 217 aa9.21□□□□□ -0.94
PMS1-208ENST00000421722 LDHDQ86WU2 507 aa9.21□□□□□ -0.94
PMS1-208ENST00000421722 CARD14Q9BXL6 1004 aa9.21□□□□□ -0.94
PMS1-208ENST00000421722 WBP1LQ9NX94 342 aa9.21□□□□□ -0.94
PMS1-208ENST00000421722 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
PMS1-208ENST00000421722 SERPINB2P05120 415 aa9.2□□□□□ -0.94
PMS1-208ENST00000421722 NFIXQ14938 502 aa9.2□□□□□ -0.94
PMS1-208ENST00000421722 USPL1Q5W0Q7 1092 aa9.2□□□□□ -0.94
PMS1-208ENST00000421722 ZNF530Q6P9A1 599 aaPredicted RBP9.2□□□□□ -0.94
PMS1-208ENST00000421722 IQCA1LA6NCM1 817 aa9.2□□□□□ -0.94
PMS1-208ENST00000421722 PPM1GO15355 546 aaPredicted RBP9.2□□□□□ -0.94
PMS1-208ENST00000421722 MTHFSP49914 203 aa9.2□□□□□ -0.94
PMS1-208ENST00000421722 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
PMS1-208ENST00000421722 FER1L6Q2WGJ9 1857 aa9.2□□□□□ -0.94
PMS1-208ENST00000421722 SCN4AP35499 1836 aa9.19□□□□□ -0.94
PMS1-208ENST00000421722 TMEM88BA6NKF7 163 aa9.19□□□□□ -0.94
PMS1-208ENST00000421722 C1orf141Q5JVX7 400 aa9.19□□□□□ -0.94
PMS1-208ENST00000421722 ABHD8Q96I13 439 aa9.19□□□□□ -0.94
PMS1-208ENST00000421722 L3MBTL3Q96JM7 780 aaPredicted RBP9.19□□□□□ -0.94
PMS1-208ENST00000421722 A0A087WZG4 1122 aa9.19□□□□□ -0.94
PMS1-208ENST00000421722 HSPA8P11142 646 aaKnown RBP9.19□□□□□ -0.94
PMS1-208ENST00000421722 SCN11AQ9UI33 1791 aa9.18□□□□□ -0.94
PMS1-208ENST00000421722 PTCD1O75127 700 aaKnown RBP9.18□□□□□ -0.94
PMS1-208ENST00000421722 PDE6BP35913 854 aa9.18□□□□□ -0.94
PMS1-208ENST00000421722 VEGFBP49765 207 aa9.18□□□□□ -0.94
PMS1-208ENST00000421722 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
PMS1-208ENST00000421722 ARFGEF2Q9Y6D5 1785 aa9.18□□□□□ -0.94
PMS1-208ENST00000421722 COL15A1P39059 1388 aa9.18□□□□□ -0.94
PMS1-208ENST00000421722 RASSF10A6NK89 507 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 CYP19A1P11511 503 aaPredicted RBP9.17□□□□□ -0.94
PMS1-208ENST00000421722 MAP2K1Q02750 393 aaPredicted RBP9.17□□□□□ -0.94
PMS1-208ENST00000421722 VSIG10Q8N0Z9 540 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 BRIP1Q9BX63 1249 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 MRC1P22897 1456 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 LBX1P52954 281 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 MLLT1Q03111 559 aaPredicted RBP9.17□□□□□ -0.94
PMS1-208ENST00000421722 STYK1Q6J9G0 422 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 DNAJC10Q8IXB1 793 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 NFATC2IPQ8NCF5 419 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 BCL2L12Q9HB09 334 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 THSD7BQ9C0I4 1608 aa9.17□□□□□ -0.94
PMS1-208ENST00000421722 FAM161AQ3B820 660 aa9.16□□□□□ -0.94
PMS1-208ENST00000421722 CNKSR1Q969H4 720 aa9.16□□□□□ -0.94
PMS1-208ENST00000421722 TAOK3Q9H2K8 898 aa9.16□□□□□ -0.94
PMS1-208ENST00000421722 TAF1DQ9H5J8 278 aaPredicted RBP9.16□□□□□ -0.94
PMS1-208ENST00000421722 ADAMTSL1Q8N6G6 1762 aa9.16□□□□□ -0.94
PMS1-208ENST00000421722 ITGBL1O95965 494 aaPredicted RBP9.16□□□□□ -0.94
PMS1-208ENST00000421722 ANKRD31Q8N7Z5 1873 aa9.15□□□□□ -0.94
PMS1-208ENST00000421722 AKAP4Q5JQC9 854 aa9.15□□□□□ -0.94
PMS1-208ENST00000421722 DEFB115Q30KQ5 88 aa9.15□□□□□ -0.95
PMS1-208ENST00000421722 SLC52A2Q9HAB3 445 aa9.15□□□□□ -0.95
PMS1-208ENST00000421722 CARMIL3Q8ND23 1372 aa9.14□□□□□ -0.95
PMS1-208ENST00000421722 C21orf2O43822 256 aa9.14□□□□□ -0.95
PMS1-208ENST00000421722 DDNO94850 711 aaPredicted RBP9.14□□□□□ -0.95
PMS1-208ENST00000421722 ZNF622Q969S3 477 aaKnown RBP eCLIP9.14□□□□□ -0.95
PMS1-208ENST00000421722 SCN7AQ01118 1682 aa9.14□□□□□ -0.95
PMS1-208ENST00000421722 WDR33Q9C0J8 1336 aaKnown RBP9.14□□□□□ -0.95
PMS1-208ENST00000421722 PNMA8AQ86V59 439 aaPredicted RBP9.14□□□□□ -0.95
PMS1-208ENST00000421722 HACL1Q9UJ83 578 aa9.14□□□□□ -0.95
PMS1-208ENST00000421722 COL11A2P13942 1736 aaPredicted RBP9.13□□□□□ -0.95
PMS1-208ENST00000421722 POTEIP0CG38 1075 aa9.13□□□□□ -0.95
PMS1-208ENST00000421722 POTEJP0CG39 1038 aa9.13□□□□□ -0.95
PMS1-208ENST00000421722 EIF5P55010 431 aaKnown RBP9.13□□□□□ -0.95
PMS1-208ENST00000421722 ZBTB1Q9Y2K1 713 aa9.13□□□□□ -0.95
PMS1-208ENST00000421722 ECE1P42892 770 aa9.12□□□□□ -0.95
PMS1-208ENST00000421722 MASTLQ96GX5 879 aa9.12□□□□□ -0.95
PMS1-208ENST00000421722 TEX13AQ9BXU3 409 aaPredicted RBP9.12□□□□□ -0.95
PMS1-208ENST00000421722 UBR2Q8IWV8 1755 aa9.12□□□□□ -0.95
PMS1-208ENST00000421722 RNMTO43148 476 aaKnown RBP9.12□□□□□ -0.95
PMS1-208ENST00000421722 STARD3NLO95772 234 aa9.12□□□□□ -0.95
PMS1-208ENST00000421722 CCDC93Q567U6 631 aa9.12□□□□□ -0.95
PMS1-208ENST00000421722 PRR5LQ6MZQ0 368 aa9.12□□□□□ -0.95
PMS1-208ENST00000421722 EPHX2P34913 555 aa9.11□□□□□ -0.95
PMS1-208ENST00000421722 ST5P78524 1137 aa9.11□□□□□ -0.95
PMS1-208ENST00000421722 FKBP4Q02790 459 aaKnown RBP eCLIP9.11□□□□□ -0.95
PMS1-208ENST00000421722 TBC1D9BQ66K14 1250 aa9.11□□□□□ -0.95
PMS1-208ENST00000421722 RGL2O15211 777 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 CA12O43570 354 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 SRGNP10124 158 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 PRPF40BQ6NWY9 871 aaKnown RBP9.1□□□□□ -0.95
PMS1-208ENST00000421722 CNTROBQ8N137 903 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 CLEC11AQ9Y240 323 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 SLX4Q8IY92 1834 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 CCDC85CA6NKD9 419 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms