RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CCDC192P0DO97 292 aa19.89■□□□□ 0.77
PKP4-204ENST00000421462 KIDINS220Q9ULH0 1771 aa19.89■□□□□ 0.77
PKP4-204ENST00000421462 HSPA4P34932 840 aa19.89■□□□□ 0.77
PKP4-204ENST00000421462 CCT4P50991 539 aaKnown RBP19.89■□□□□ 0.77
PKP4-204ENST00000421462 EIF4A2Q14240 407 aaKnown RBP19.89■□□□□ 0.77
PKP4-204ENST00000421462 LIMCH1Q9UPQ0 1083 aa19.89■□□□□ 0.77
PKP4-204ENST00000421462 BBXQ8WY36 941 aaPredicted RBP19.88■□□□□ 0.77
PKP4-204ENST00000421462 RTF1Q92541 710 aaKnown RBP19.88■□□□□ 0.77
PKP4-204ENST00000421462 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.88■□□□□ 0.77
PKP4-204ENST00000421462 KIF20AO95235 890 aa19.88■□□□□ 0.77
PKP4-204ENST00000421462 HSP90AB2PQ58FF8 381 aa19.88■□□□□ 0.77
PKP4-204ENST00000421462 TFIP11Q9UBB9 837 aaKnown RBP19.88■□□□□ 0.77
PKP4-204ENST00000421462 TNNT1P13805 278 aa19.87■□□□□ 0.77
PKP4-204ENST00000421462 ATP6V1DQ9Y5K8 247 aa19.87■□□□□ 0.77
PKP4-204ENST00000421462 PTPRMP28827 1452 aa19.87■□□□□ 0.77
PKP4-204ENST00000421462 POGZQ7Z3K3 1410 aa19.87■□□□□ 0.77
PKP4-204ENST00000421462 NCBP1Q09161 790 aaKnown RBP19.87■□□□□ 0.77
PKP4-204ENST00000421462 TCEANC2Q96MN5 208 aa19.87■□□□□ 0.77
PKP4-204ENST00000421462 GOLGA6L4A6NEF3 574 aa19.87■□□□□ 0.77
PKP4-204ENST00000421462 JAKMIP1Q96N16 626 aaKnown RBP19.86■□□□□ 0.77
PKP4-204ENST00000421462 LIG1P18858 919 aa19.86■□□□□ 0.77
PKP4-204ENST00000421462 TPD52L1Q16890 204 aaPredicted RBP19.86■□□□□ 0.77
PKP4-204ENST00000421462 TXNDC2Q86VQ3 553 aa19.86■□□□□ 0.77
PKP4-204ENST00000421462 NEXMIFQ5QGS0 1516 aa19.86■□□□□ 0.77
PKP4-204ENST00000421462 FUCA2Q9BTY2 467 aa19.85■□□□□ 0.77
PKP4-204ENST00000421462 ANO6Q4KMQ2 910 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 PRPF40BQ6NWY9 871 aaKnown RBP19.84■□□□□ 0.77
PKP4-204ENST00000421462 ANKRD7Q92527 254 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 TMEM87AQ8NBN3 555 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 SALL3Q9BXA9 1300 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 KCNJ4P48050 445 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 ATP8B2P98198 1209 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 FLIIQ13045 1269 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 ADCK5Q3MIX3 580 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 NUP62CLQ9H1M0 184 aa19.84■□□□□ 0.77
PKP4-204ENST00000421462 YEATS2Q9ULM3 1422 aa19.83■□□□□ 0.77
PKP4-204ENST00000421462 MTMR6Q9Y217 621 aa19.83■□□□□ 0.77
PKP4-204ENST00000421462 TYRO3Q06418 890 aa19.83■□□□□ 0.76
PKP4-204ENST00000421462 OS9Q13438 667 aaPredicted RBP19.83■□□□□ 0.76
PKP4-204ENST00000421462 MAP3K11Q16584 847 aa19.83■□□□□ 0.76
PKP4-204ENST00000421462 ERICH4A6NGS2 130 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 GNAI3P08754 354 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 CCDC112Q8NEF3 446 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 FBXW7Q969H0 707 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 TNMDQ9H2S6 317 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 DACT1Q9NYF0 836 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 UBTFL1P0CB47 393 aaPredicted RBP19.82■□□□□ 0.76
PKP4-204ENST00000421462 LARP1BQ659C4 914 aaKnown RBP19.82■□□□□ 0.76
PKP4-204ENST00000421462 TTC6Q86TZ1 520 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 FAM200AQ8TCP9 573 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 PDRG1Q9NUG6 133 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
PKP4-204ENST00000421462 NUDT16Q96DE0 195 aaKnown RBP19.82■□□□□ 0.76
PKP4-204ENST00000421462 LMTK2Q8IWU2 1503 aa19.81■□□□□ 0.76
PKP4-204ENST00000421462 VGLL3A8MV65 326 aa19.81■□□□□ 0.76
PKP4-204ENST00000421462 STK3Q13188 491 aa19.81■□□□□ 0.76
PKP4-204ENST00000421462 SGSM2O43147 1006 aa19.81■□□□□ 0.76
PKP4-204ENST00000421462 MRVI1Q9Y6F6 885 aa19.81■□□□□ 0.76
PKP4-204ENST00000421462 RAD50Q92878 1312 aa19.81■□□□□ 0.76
PKP4-204ENST00000421462 KIF20BQ96Q89 1820 aa19.81■□□□□ 0.76
PKP4-204ENST00000421462 TTC14Q96N46 770 aa19.8■□□□□ 0.76
PKP4-204ENST00000421462 CBX8Q9HC52 389 aa19.8■□□□□ 0.76
PKP4-204ENST00000421462 ABCA9Q8IUA7 1624 aa19.8■□□□□ 0.76
PKP4-204ENST00000421462 TPM3P06753 285 aa19.8■□□□□ 0.76
PKP4-204ENST00000421462 PPP1R42Q7Z4L9 355 aa19.8■□□□□ 0.76
PKP4-204ENST00000421462 SLC52A1Q9NWF4 448 aa19.8■□□□□ 0.76
PKP4-204ENST00000421462 TRMT1Q9NXH9 659 aaKnown RBP19.8■□□□□ 0.76
PKP4-204ENST00000421462 CTIFO43310 598 aaKnown RBP19.79■□□□□ 0.76
PKP4-204ENST00000421462 PTH1RQ03431 593 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 CEBPZQ03701 1054 aaKnown RBP19.79■□□□□ 0.76
PKP4-204ENST00000421462 ARID5BQ14865 1188 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 CDC37L1Q7L3B6 337 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 DNAJC25Q9H1X3 360 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 OGFRQ9NZT2 677 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 FGD1P98174 961 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 MTHFSDQ2M296 383 aaKnown RBP19.79■□□□□ 0.76
PKP4-204ENST00000421462 KIAA0232Q92628 1395 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 ARAP3Q8WWN8 1544 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 SRGAP3O43295 1099 aa19.79■□□□□ 0.76
PKP4-204ENST00000421462 LSG1Q9H089 658 aaKnown RBP19.79■□□□□ 0.76
PKP4-204ENST00000421462 SIGLEC1Q9BZZ2 1709 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 NPM1P06748 294 aaKnown RBP eCLIP19.78■□□□□ 0.76
PKP4-204ENST00000421462 FOSBP53539 338 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 COL9A3Q14050 684 aaPredicted RBP19.78■□□□□ 0.76
PKP4-204ENST00000421462 BICD2Q8TD16 824 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 HYPKQ9NX55 129 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 ASXL2Q76L83 1435 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 CDC42BPGQ6DT37 1551 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 A0A087WWV3 80 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 KRT85P78386 507 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 ME3Q16798 604 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 CNTROBQ8N137 903 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 CLIP2Q9UDT6 1046 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 CTNNA3Q9UI47 895 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 UHRF1BP1LA0JNW5 1464 aa19.78■□□□□ 0.76
PKP4-204ENST00000421462 WASLO00401 505 aaPredicted RBP19.77■□□□□ 0.76
PKP4-204ENST00000421462 EIF2S2P20042 333 aaKnown RBP19.77■□□□□ 0.76
PKP4-204ENST00000421462 ZSCAN25Q6NSZ9 544 aa19.77■□□□□ 0.76
PKP4-204ENST00000421462 CPSF1Q10570 1443 aaKnown RBP19.77■□□□□ 0.76
PKP4-204ENST00000421462 RHPN1Q8TCX5 695 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms