RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
RFX3-205ENST00000420720 RAPGEF4Q8WZA2 1011 aa9.93□□□□□ -0.82
RFX3-205ENST00000420720 RRAGCQ9HB90 399 aa9.93□□□□□ -0.82
RFX3-205ENST00000420720 CCNL1Q9UK58 526 aaPredicted RBP9.93□□□□□ -0.82
RFX3-205ENST00000420720 LTN1O94822 1766 aa9.93□□□□□ -0.82
RFX3-205ENST00000420720 TNRC6CQ9HCJ0 1690 aaKnown RBP9.93□□□□□ -0.82
RFX3-205ENST00000420720 MEGF6O75095 1541 aa9.92□□□□□ -0.82
RFX3-205ENST00000420720 NSD2O96028 1365 aa9.92□□□□□ -0.82
RFX3-205ENST00000420720 USP47Q96K76 1375 aa9.92□□□□□ -0.82
RFX3-205ENST00000420720 CCDC85CA6NKD9 419 aa9.92□□□□□ -0.82
RFX3-205ENST00000420720 SNPHO15079 494 aa9.92□□□□□ -0.82
RFX3-205ENST00000420720 HSP90AB2PQ58FF8 381 aa9.92□□□□□ -0.82
RFX3-205ENST00000420720 LY75O60449 1722 aa9.92□□□□□ -0.82
RFX3-205ENST00000420720 PDE4DIPQ5VU43 2346 aa9.91□□□□□ -0.82
RFX3-205ENST00000420720 RTL1A6NKG5 1358 aa9.91□□□□□ -0.82
RFX3-205ENST00000420720 CTCFP49711 727 aaPredicted RBP9.91□□□□□ -0.82
RFX3-205ENST00000420720 LBX1P52954 281 aa9.91□□□□□ -0.82
RFX3-205ENST00000420720 MKRN1Q9UHC7 482 aaKnown RBP9.91□□□□□ -0.82
RFX3-205ENST00000420720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.9□□□□□ -0.82
RFX3-205ENST00000420720 POTEB3A0JP26 581 aa9.9□□□□□ -0.82
RFX3-205ENST00000420720 RIOK3O14730 519 aaKnown RBP9.9□□□□□ -0.82
RFX3-205ENST00000420720 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
RFX3-205ENST00000420720 TRIM26Q12899 539 aaPredicted RBP9.9□□□□□ -0.82
RFX3-205ENST00000420720 CDCA8Q53HL2 280 aa9.9□□□□□ -0.82
RFX3-205ENST00000420720 POTEBQ6S5H4 581 aa9.9□□□□□ -0.82
RFX3-205ENST00000420720 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
RFX3-205ENST00000420720 MS4A4AQ96JQ5 239 aa9.9□□□□□ -0.82
RFX3-205ENST00000420720 CARD14Q9BXL6 1004 aa9.9□□□□□ -0.82
RFX3-205ENST00000420720 SMG6Q86US8 1419 aaKnown RBP9.9□□□□□ -0.83
RFX3-205ENST00000420720 INSRP06213 1382 aa9.89□□□□□ -0.83
RFX3-205ENST00000420720 PLEKHG2Q9H7P9 1386 aa9.89□□□□□ -0.83
RFX3-205ENST00000420720 CGNL1Q0VF96 1302 aa9.89□□□□□ -0.83
RFX3-205ENST00000420720 C9orf131Q5VYM1 1079 aa9.89□□□□□ -0.83
RFX3-205ENST00000420720 EMILIN1Q9Y6C2 1016 aa9.89□□□□□ -0.83
RFX3-205ENST00000420720 KDM2BQ8NHM5 1336 aa9.88□□□□□ -0.83
RFX3-205ENST00000420720 FAM208AQ9UK61 1670 aaKnown RBP9.88□□□□□ -0.83
RFX3-205ENST00000420720 PPM1GO15355 546 aaPredicted RBP9.88□□□□□ -0.83
RFX3-205ENST00000420720 CYP27B1O15528 508 aa9.88□□□□□ -0.83
RFX3-205ENST00000420720 MPRIPQ6WCQ1 1025 aa9.88□□□□□ -0.83
RFX3-205ENST00000420720 FLT4P35916 1363 aa9.88□□□□□ -0.83
RFX3-205ENST00000420720 PCDH11XQ9BZA7 1347 aa9.87□□□□□ -0.83
RFX3-205ENST00000420720 PCDH11YQ9BZA8 1340 aa9.87□□□□□ -0.83
RFX3-205ENST00000420720 HSPA8P11142 646 aaKnown RBP9.87□□□□□ -0.83
RFX3-205ENST00000420720 TMEM92Q6UXU6 159 aa9.87□□□□□ -0.83
RFX3-205ENST00000420720 ARHGAP27Q6ZUM4 889 aa9.87□□□□□ -0.83
RFX3-205ENST00000420720 SMIM5Q71RC9 77 aa9.87□□□□□ -0.83
RFX3-205ENST00000420720 N4BP2Q86UW6 1770 aaPredicted RBP9.87□□□□□ -0.83
RFX3-205ENST00000420720 NSD3Q9BZ95 1437 aa9.87□□□□□ -0.83
RFX3-205ENST00000420720 EMP3P54852 163 aa9.86□□□□□ -0.83
RFX3-205ENST00000420720 AMIGO3Q86WK7 504 aa9.86□□□□□ -0.83
RFX3-205ENST00000420720 POLR3GLQ9BT43 218 aa9.86□□□□□ -0.83
RFX3-205ENST00000420720 BCS1LQ9Y276 419 aa9.86□□□□□ -0.83
RFX3-205ENST00000420720 TOGARAM1Q9Y4F4 1720 aa9.86□□□□□ -0.83
RFX3-205ENST00000420720 PALLDQ8WX93 1383 aa9.86□□□□□ -0.83
RFX3-205ENST00000420720 DOT1LQ8TEK3 1739 aa9.85□□□□□ -0.83
RFX3-205ENST00000420720 WBP1LQ9NX94 342 aa9.85□□□□□ -0.83
RFX3-205ENST00000420720 CNTNAP1P78357 1384 aa9.85□□□□□ -0.83
RFX3-205ENST00000420720 KIF24Q5T7B8 1368 aa9.85□□□□□ -0.83
RFX3-205ENST00000420720 KIF13BQ9NQT8 1826 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 MICALL2Q8IY33 904 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 FLAD1Q8NFF5 587 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 PIGBQ92521 554 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 SMARCC1Q92922 1105 aaPredicted RBP9.84□□□□□ -0.83
RFX3-205ENST00000420720 AIDAQ96BJ3 306 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 AK7Q96M32 723 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 EYA1Q99502 592 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 SPG7Q9UQ90 795 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 KAT6BQ8WYB5 2073 aa9.84□□□□□ -0.83
RFX3-205ENST00000420720 VIRMAQ69YN4 1812 aaKnown RBP9.84□□□□□ -0.83
RFX3-205ENST00000420720 C5P01031 1676 aa9.83□□□□□ -0.84
RFX3-205ENST00000420720 WASHC2AQ641Q2 1341 aa9.83□□□□□ -0.84
RFX3-205ENST00000420720 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
RFX3-205ENST00000420720 PHF14O94880 888 aa9.83□□□□□ -0.84
RFX3-205ENST00000420720 NKX1-1Q15270 411 aaPredicted RBP9.83□□□□□ -0.84
RFX3-205ENST00000420720 POLKQ9UBT6 870 aa9.83□□□□□ -0.84
RFX3-205ENST00000420720 RGPD2P0DJD1 1756 aa9.83□□□□□ -0.84
RFX3-205ENST00000420720 HMGB2P26583 209 aaKnown RBP9.82□□□□□ -0.84
RFX3-205ENST00000420720 TNNT2P45379 298 aaPredicted RBP9.82□□□□□ -0.84
RFX3-205ENST00000420720 HS3ST6Q96QI5 342 aa9.82□□□□□ -0.84
RFX3-205ENST00000420720 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
RFX3-205ENST00000420720 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
RFX3-205ENST00000420720 KRTAP3-2Q9BYR7 98 aa9.82□□□□□ -0.84
RFX3-205ENST00000420720 TIMELESSQ9UNS1 1208 aa9.82□□□□□ -0.84
RFX3-205ENST00000420720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.81□□□□□ -0.84
RFX3-205ENST00000420720 A0A0G2JLW4 131 aa9.81□□□□□ -0.84
RFX3-205ENST00000420720 PHKG2P15735 406 aa9.81□□□□□ -0.84
RFX3-205ENST00000420720 VEGFBP49765 207 aa9.81□□□□□ -0.84
RFX3-205ENST00000420720 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
RFX3-205ENST00000420720 IFNL2Q8IZJ0 200 aa9.81□□□□□ -0.84
RFX3-205ENST00000420720 TMOD3Q9NYL9 352 aa9.81□□□□□ -0.84
RFX3-205ENST00000420720 RNF181Q9P0P0 153 aa9.81□□□□□ -0.84
RFX3-205ENST00000420720 ASAP1Q9ULH1 1129 aa9.81□□□□□ -0.84
RFX3-205ENST00000420720 ARFGEF1Q9Y6D6 1849 aa9.8□□□□□ -0.84
RFX3-205ENST00000420720 LOC102724428A0A0B4J2F2 783 aa9.8□□□□□ -0.84
RFX3-205ENST00000420720 G3V3G9 751 aa9.8□□□□□ -0.84
RFX3-205ENST00000420720 SIK1P57059 783 aa9.8□□□□□ -0.84
RFX3-205ENST00000420720 EIF4A2Q14240 407 aaKnown RBP9.8□□□□□ -0.84
RFX3-205ENST00000420720 PRPF38BQ5VTL8 546 aaKnown RBP9.8□□□□□ -0.84
RFX3-205ENST00000420720 LINC00116Q8NCU8 138 aa9.8□□□□□ -0.84
RFX3-205ENST00000420720 NCAPD2Q15021 1401 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms