RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 NFATC2IPQ8NCF5 419 aa13.98□□□□□ -0.17
RFC1-203ENST00000418436 PNNQ9H307 717 aaKnown RBP13.98□□□□□ -0.17
RFC1-203ENST00000418436 ATG3Q9NT62 314 aa13.98□□□□□ -0.17
RFC1-203ENST00000418436 ASAP1Q9ULH1 1129 aa13.98□□□□□ -0.17
RFC1-203ENST00000418436 QSER1Q2KHR3 1735 aa13.98□□□□□ -0.17
RFC1-203ENST00000418436 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
RFC1-203ENST00000418436 IL17REQ8NFR9 667 aa13.97□□□□□ -0.17
RFC1-203ENST00000418436 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
RFC1-203ENST00000418436 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
RFC1-203ENST00000418436 ANP32CO43423 234 aa13.96□□□□□ -0.17
RFC1-203ENST00000418436 KCNQ4P56696 695 aa13.96□□□□□ -0.17
RFC1-203ENST00000418436 SLC15A2Q16348 729 aa13.96□□□□□ -0.17
RFC1-203ENST00000418436 IER5LQ5T953 404 aa13.96□□□□□ -0.17
RFC1-203ENST00000418436 CASZ1Q86V15 1759 aa13.96□□□□□ -0.18
RFC1-203ENST00000418436 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.18
RFC1-203ENST00000418436 TUBGCP6Q96RT7 1819 aa13.95□□□□□ -0.18
RFC1-203ENST00000418436 LOC102724428A0A0B4J2F2 783 aa13.95□□□□□ -0.18
RFC1-203ENST00000418436 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
RFC1-203ENST00000418436 SIK1P57059 783 aa13.95□□□□□ -0.18
RFC1-203ENST00000418436 STK32BQ9NY57 414 aa13.95□□□□□ -0.18
RFC1-203ENST00000418436 CICQ96RK0 1608 aaPredicted RBP13.94□□□□□ -0.18
RFC1-203ENST00000418436 NEFMP07197 916 aa13.94□□□□□ -0.18
RFC1-203ENST00000418436 HMGB2P26583 209 aaKnown RBP13.94□□□□□ -0.18
RFC1-203ENST00000418436 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
RFC1-203ENST00000418436 CCDC184Q52MB2 194 aa13.94□□□□□ -0.18
RFC1-203ENST00000418436 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
RFC1-203ENST00000418436 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
RFC1-203ENST00000418436 COL5A3P25940 1745 aaPredicted RBP13.93□□□□□ -0.18
RFC1-203ENST00000418436 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
RFC1-203ENST00000418436 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
RFC1-203ENST00000418436 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
RFC1-203ENST00000418436 ADAMTS8Q9UP79 889 aa13.93□□□□□ -0.18
RFC1-203ENST00000418436 POTEFA5A3E0 1075 aa13.92□□□□□ -0.18
RFC1-203ENST00000418436 ITPK1Q13572 414 aa13.92□□□□□ -0.18
RFC1-203ENST00000418436 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
RFC1-203ENST00000418436 LRP5O75197 1615 aa13.91□□□□□ -0.18
RFC1-203ENST00000418436 TJP1Q07157 1748 aa13.91□□□□□ -0.18
RFC1-203ENST00000418436 ATP6V1AP38606 617 aa13.91□□□□□ -0.18
RFC1-203ENST00000418436 TEFQ10587 303 aa13.91□□□□□ -0.18
RFC1-203ENST00000418436 RTF1Q92541 710 aaKnown RBP13.91□□□□□ -0.18
RFC1-203ENST00000418436 UBR3Q6ZT12 1888 aa13.91□□□□□ -0.18
RFC1-203ENST00000418436 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
RFC1-203ENST00000418436 PSEN1P49768 467 aa13.9□□□□□ -0.18
RFC1-203ENST00000418436 MCM10Q7L590 875 aa13.9□□□□□ -0.18
RFC1-203ENST00000418436 LINC00116Q8NCU8 138 aa13.9□□□□□ -0.18
RFC1-203ENST00000418436 RUNDC1Q96C34 613 aa13.9□□□□□ -0.18
RFC1-203ENST00000418436 PDGFDQ9GZP0 370 aaPredicted RBP13.9□□□□□ -0.18
RFC1-203ENST00000418436 PTCD1O75127 700 aaKnown RBP13.89□□□□□ -0.19
RFC1-203ENST00000418436 TMPOP42166 694 aaKnown RBP13.89□□□□□ -0.19
RFC1-203ENST00000418436 SLC39A6Q13433 755 aa13.89□□□□□ -0.19
RFC1-203ENST00000418436 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
RFC1-203ENST00000418436 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
RFC1-203ENST00000418436 PNISRQ8TF01 805 aaKnown RBP13.89□□□□□ -0.19
RFC1-203ENST00000418436 PNPLA7Q6ZV29 1317 aa13.89□□□□□ -0.19
RFC1-203ENST00000418436 COL24A1Q17RW2 1714 aa13.88□□□□□ -0.19
RFC1-203ENST00000418436 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
RFC1-203ENST00000418436 TFCP2L1Q9NZI6 479 aa13.88□□□□□ -0.19
RFC1-203ENST00000418436 MYH14Q7Z406 1995 aaKnown RBP13.88□□□□□ -0.19
RFC1-203ENST00000418436 SEC24BO95487 1268 aa13.87□□□□□ -0.19
RFC1-203ENST00000418436 RIPK4P57078 832 aa13.87□□□□□ -0.19
RFC1-203ENST00000418436 ZNF790Q6PG37 636 aa13.87□□□□□ -0.19
RFC1-203ENST00000418436 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
RFC1-203ENST00000418436 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
RFC1-203ENST00000418436 COLQQ9Y215 455 aaPredicted RBP13.87□□□□□ -0.19
RFC1-203ENST00000418436 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
RFC1-203ENST00000418436 BTBD11A6QL63 1104 aa13.86□□□□□ -0.19
RFC1-203ENST00000418436 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
RFC1-203ENST00000418436 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
RFC1-203ENST00000418436 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
RFC1-203ENST00000418436 AMIGO3Q86WK7 504 aa13.85□□□□□ -0.19
RFC1-203ENST00000418436 COL23A1Q86Y22 540 aaPredicted RBP13.85□□□□□ -0.19
RFC1-203ENST00000418436 TTC5Q8N0Z6 440 aa13.85□□□□□ -0.19
RFC1-203ENST00000418436 FLAD1Q8NFF5 587 aa13.85□□□□□ -0.19
RFC1-203ENST00000418436 SLC16A10Q8TF71 515 aa13.85□□□□□ -0.19
RFC1-203ENST00000418436 OTUD5Q96G74 571 aa13.85□□□□□ -0.19
RFC1-203ENST00000418436 AK7Q96M32 723 aa13.85□□□□□ -0.19
RFC1-203ENST00000418436 KCNQ3O43525 872 aa13.84□□□□□ -0.19
RFC1-203ENST00000418436 POTEJP0CG39 1038 aa13.84□□□□□ -0.19
RFC1-203ENST00000418436 LMOD3Q0VAK6 560 aa13.84□□□□□ -0.19
RFC1-203ENST00000418436 DNAJC10Q8IXB1 793 aa13.84□□□□□ -0.19
RFC1-203ENST00000418436 ZNF496Q96IT1 587 aaPredicted RBP13.84□□□□□ -0.19
RFC1-203ENST00000418436 THUMPD2Q9BTF0 503 aaKnown RBP13.84□□□□□ -0.19
RFC1-203ENST00000418436 MTFR1LQ9H019 292 aa13.84□□□□□ -0.19
RFC1-203ENST00000418436 SPON1Q9HCB6 807 aa13.84□□□□□ -0.19
RFC1-203ENST00000418436 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
RFC1-203ENST00000418436 HEG1Q9ULI3 1381 aa13.83□□□□□ -0.19
RFC1-203ENST00000418436 ZBTB7AO95365 584 aa13.83□□□□□ -0.2
RFC1-203ENST00000418436 SSFA2P28290 1259 aa13.83□□□□□ -0.2
RFC1-203ENST00000418436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
RFC1-203ENST00000418436 APAF1O14727 1248 aa13.82□□□□□ -0.2
RFC1-203ENST00000418436 GNPATO15228 680 aa13.82□□□□□ -0.2
RFC1-203ENST00000418436 RPS6KA4O75676 772 aa13.82□□□□□ -0.2
RFC1-203ENST00000418436 CYP19A1P11511 503 aaPredicted RBP13.82□□□□□ -0.2
RFC1-203ENST00000418436 PTGER2P43116 358 aa13.82□□□□□ -0.2
RFC1-203ENST00000418436 CRKLP46109 303 aaKnown RBP13.82□□□□□ -0.2
RFC1-203ENST00000418436 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
RFC1-203ENST00000418436 INTS5Q6P9B9 1019 aaKnown RBP13.82□□□□□ -0.2
RFC1-203ENST00000418436 FMNL2Q96PY5 1086 aa13.82□□□□□ -0.2
RFC1-203ENST00000418436 NEUROD2Q15784 382 aa13.81□□□□□ -0.2
RFC1-203ENST00000418436 SMIM5Q71RC9 77 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms