RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ZNF530Q6P9A1 599 aaPredicted RBP14.42□□□□□ -0.1
LIMK1-202ENST00000418310 ZNF445P59923 1031 aa14.41□□□□□ -0.1
LIMK1-202ENST00000418310 CWF19L2Q2TBE0 894 aaKnown RBP14.41□□□□□ -0.1
LIMK1-202ENST00000418310 CLEC17AQ6ZS10 378 aa14.41□□□□□ -0.1
LIMK1-202ENST00000418310 KIAA1211Q6ZU35 1233 aa14.41□□□□□ -0.1
LIMK1-202ENST00000418310 NRKQ7Z2Y5 1582 aa14.41□□□□□ -0.1
LIMK1-202ENST00000418310 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
LIMK1-202ENST00000418310 PTMAP06454 111 aaKnown RBP14.4□□□□□ -0.1
LIMK1-202ENST00000418310 ZSCAN30Q86W11 494 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 SIL1Q9H173 461 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 KDRP35968 1356 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 JARID2Q92833 1246 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-202ENST00000418310 C9orf78Q9NZ63 289 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-202ENST00000418310 CHMP3Q9Y3E7 222 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 CCDC9Q9Y3X0 531 aaKnown RBP14.4□□□□□ -0.1
LIMK1-202ENST00000418310 BTBD11A6QL63 1104 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 FIBPO43427 364 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 PSME1Q06323 249 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 PROSER3Q2NL68 480 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 DNAAF4Q8WXU2 420 aa14.4□□□□□ -0.1
LIMK1-202ENST00000418310 TCEANC2Q96MN5 208 aa14.39□□□□□ -0.11
LIMK1-202ENST00000418310 R3HCC1Q9Y3T6 440 aaKnown RBP14.39□□□□□ -0.11
LIMK1-202ENST00000418310 BRD1O95696 1058 aa14.39□□□□□ -0.11
LIMK1-202ENST00000418310 PIP4K2AP48426 406 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-202ENST00000418310 RGPD8O14715 1765 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-202ENST00000418310 RBM10P98175 930 aaKnown RBP14.39□□□□□ -0.11
LIMK1-202ENST00000418310 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
LIMK1-202ENST00000418310 PPP1R9BQ96SB3 815 aa14.39□□□□□ -0.11
LIMK1-202ENST00000418310 CNPY2Q9Y2B0 182 aa14.39□□□□□ -0.11
LIMK1-202ENST00000418310 CASTP20810 708 aaKnown RBP14.38□□□□□ -0.11
LIMK1-202ENST00000418310 KCNJ4P48050 445 aa14.38□□□□□ -0.11
LIMK1-202ENST00000418310 USP48Q86UV5 1035 aa14.38□□□□□ -0.11
LIMK1-202ENST00000418310 DIAPH3Q9NSV4 1193 aa14.38□□□□□ -0.11
LIMK1-202ENST00000418310 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
LIMK1-202ENST00000418310 HSP90AA2PQ14568 343 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-202ENST00000418310 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
LIMK1-202ENST00000418310 SSH3Q8TE77 659 aa14.38□□□□□ -0.11
LIMK1-202ENST00000418310 AK2P54819 239 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 EIF4A1P60842 406 aaKnown RBP14.37□□□□□ -0.11
LIMK1-202ENST00000418310 CCDC83Q8IWF9 413 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 UBE2Q2Q8WVN8 375 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 TBX22Q9Y458 520 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 LARGE1O95461 756 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 PRPF40BQ6NWY9 871 aaKnown RBP14.37□□□□□ -0.11
LIMK1-202ENST00000418310 KLHDC4Q8TBB5 520 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 KIF1BPQ96EK5 621 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 MAP3K2Q9Y2U5 619 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 SNX14Q9Y5W7 946 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 REREQ9P2R6 1566 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 CNTROBQ8N137 903 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 THEMISQ8N1K5 641 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-202ENST00000418310 CCDC8Q9H0W5 538 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-202ENST00000418310 UBR1Q8IWV7 1749 aa14.37□□□□□ -0.11
LIMK1-202ENST00000418310 ZNF830Q96NB3 372 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-202ENST00000418310 STAP2Q9UGK3 403 aa14.36□□□□□ -0.11
LIMK1-202ENST00000418310 VPS37CA5D8V6 355 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-202ENST00000418310 MCM2P49736 904 aa14.36□□□□□ -0.11
LIMK1-202ENST00000418310 PTH1RQ03431 593 aa14.36□□□□□ -0.11
LIMK1-202ENST00000418310 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
LIMK1-202ENST00000418310 JAKMIP1Q96N16 626 aaKnown RBP14.36□□□□□ -0.11
LIMK1-202ENST00000418310 SGSM2O43147 1006 aa14.35□□□□□ -0.11
LIMK1-202ENST00000418310 HSPA4P34932 840 aa14.35□□□□□ -0.11
LIMK1-202ENST00000418310 CUL4AQ13619 759 aa14.35□□□□□ -0.11
LIMK1-202ENST00000418310 ADCK5Q3MIX3 580 aa14.35□□□□□ -0.11
LIMK1-202ENST00000418310 BEND3Q5T5X7 828 aa14.35□□□□□ -0.11
LIMK1-202ENST00000418310 MYL6BP14649 208 aa14.35□□□□□ -0.11
LIMK1-202ENST00000418310 SLC39A6Q13433 755 aa14.35□□□□□ -0.11
LIMK1-202ENST00000418310 COL9A3Q14050 684 aaPredicted RBP14.35□□□□□ -0.11
LIMK1-202ENST00000418310 AACSQ86V21 672 aa14.35□□□□□ -0.11
LIMK1-202ENST00000418310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.35□□□□□ -0.11
LIMK1-202ENST00000418310 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
LIMK1-202ENST00000418310 IFIT2P09913 472 aaKnown RBP14.34□□□□□ -0.11
LIMK1-202ENST00000418310 FERMT3Q86UX7 667 aa14.34□□□□□ -0.11
LIMK1-202ENST00000418310 CLASRPQ8N2M8 674 aaKnown RBP14.34□□□□□ -0.11
LIMK1-202ENST00000418310 TSPY26PQ9H489 355 aa14.34□□□□□ -0.11
LIMK1-202ENST00000418310 SMC3Q9UQE7 1217 aa14.34□□□□□ -0.11
LIMK1-202ENST00000418310 DIP2AQ14689 1571 aa14.34□□□□□ -0.11
LIMK1-202ENST00000418310 MBD3O95983 291 aa14.34□□□□□ -0.11
LIMK1-202ENST00000418310 C1orf141Q5JVX7 400 aa14.34□□□□□ -0.11
LIMK1-202ENST00000418310 RUFY3Q7L099 469 aa14.34□□□□□ -0.11
LIMK1-202ENST00000418310 NDUFB9Q9Y6M9 179 aa14.34□□□□□ -0.11
LIMK1-202ENST00000418310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.33□□□□□ -0.11
LIMK1-202ENST00000418310 ORAI2Q96SN7 254 aa14.33□□□□□ -0.11
LIMK1-202ENST00000418310 RGPD1P0DJD0 1748 aa14.33□□□□□ -0.12
LIMK1-202ENST00000418310 RAD50Q92878 1312 aa14.33□□□□□ -0.12
LIMK1-202ENST00000418310 ANAPC15P60006 121 aa14.33□□□□□ -0.12
LIMK1-202ENST00000418310 FAM173BQ6P4H8 233 aa14.33□□□□□ -0.12
LIMK1-202ENST00000418310 BOLA2Q9H3K6 86 aa14.33□□□□□ -0.12
LIMK1-202ENST00000418310 USP25Q9UHP3 1055 aa14.33□□□□□ -0.12
LIMK1-202ENST00000418310 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.12
LIMK1-202ENST00000418310 EDC3Q96F86 508 aaKnown RBP14.33□□□□□ -0.12
LIMK1-202ENST00000418310 FAM227BQ96M60 508 aa14.33□□□□□ -0.12
LIMK1-202ENST00000418310 LSG1Q9H089 658 aaKnown RBP14.33□□□□□ -0.12
LIMK1-202ENST00000418310 WDR33Q9C0J8 1336 aaKnown RBP14.32□□□□□ -0.12
LIMK1-202ENST00000418310 RAB11FIP3O75154 756 aa14.32□□□□□ -0.12
LIMK1-202ENST00000418310 SYT1P21579 422 aa14.32□□□□□ -0.12
LIMK1-202ENST00000418310 TLR7Q9NYK1 1049 aaKnown RBP14.32□□□□□ -0.12
LIMK1-202ENST00000418310 HCLS1P14317 486 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-202ENST00000418310 STK3Q13188 491 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms