RNA–Protein interactions for RNA: ENST00000418189.5

HDAC11-209, Transcript of histone deacetylase 11, human

TSL 5

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC11-209	ENST00000418189	GNAT3	A8MTJ3	354 aa		33.11	■■■□□ 2.89
HDAC11-209	ENST00000418189	POLRMT	O00411	1230 aa	Known RBP	33.11	■■■□□ 2.89
HDAC11-209	ENST00000418189	TTC5	Q8N0Z6	440 aa		33.11	■■■□□ 2.89
HDAC11-209	ENST00000418189	AFDN	P55196	1824 aa	Known RBP	33.1	■■■□□ 2.89
HDAC11-209	ENST00000418189	NARF	Q9UHQ1	456 aa		33.1	■■■□□ 2.89
HDAC11-209	ENST00000418189	TEF	Q10587	303 aa		33.09	■■■□□ 2.89
HDAC11-209	ENST00000418189	CFAP53	Q96M91	514 aa		33.09	■■■□□ 2.89
HDAC11-209	ENST00000418189	NRXN2	Q9P2S2	1712 aa		33.08	■■■□□ 2.89
HDAC11-209	ENST00000418189	IL17RE	Q8NFR9	667 aa		33.08	■■■□□ 2.89
HDAC11-209	ENST00000418189	PIM2	Q9P1W9	311 aa		33.08	■■■□□ 2.89
HDAC11-209	ENST00000418189	ARHGAP27	Q6ZUM4	889 aa		33.07	■■■□□ 2.88
HDAC11-209	ENST00000418189	STARD3NL	O95772	234 aa		33.04	■■■□□ 2.88
HDAC11-209	ENST00000418189	ZNF790	Q6PG37	636 aa		33.04	■■■□□ 2.88
HDAC11-209	ENST00000418189	CEMIP	Q8WUJ3	1361 aa		33.04	■■■□□ 2.88
HDAC11-209	ENST00000418189	HEG1	Q9ULI3	1381 aa		33.04	■■■□□ 2.88
HDAC11-209	ENST00000418189	NFIX	Q14938	502 aa		33.03	■■■□□ 2.88
HDAC11-209	ENST00000418189	DALRD3	Q5D0E6	543 aa	Known RBP	33.03	■■■□□ 2.88
HDAC11-209	ENST00000418189	ZNF496	Q96IT1	587 aa	Predicted RBP	33.03	■■■□□ 2.88
HDAC11-209	ENST00000418189	RSPH6A	Q9H0K4	717 aa		33.03	■■■□□ 2.88
HDAC11-209	ENST00000418189	CANX	P27824	592 aa	Known RBP	33.02	■■■□□ 2.88
HDAC11-209	ENST00000418189	PRKAR2B	P31323	418 aa		33.02	■■■□□ 2.88
HDAC11-209	ENST00000418189	BCL2L12	Q9HB09	334 aa		33.02	■■■□□ 2.88
HDAC11-209	ENST00000418189	CHRNA5	P30532	468 aa		33.01	■■■□□ 2.87
HDAC11-209	ENST00000418189	PHACTR3	Q96KR7	559 aa		33.01	■■■□□ 2.87
HDAC11-209	ENST00000418189	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.01	■■■□□ 2.87
HDAC11-209	ENST00000418189	NUDC	Q9Y266	331 aa		33.01	■■■□□ 2.87
HDAC11-209	ENST00000418189	KIF3C	O14782	793 aa		33	■■■□□ 2.87
HDAC11-209	ENST00000418189	EIF5	P55010	431 aa	Known RBP	33	■■■□□ 2.87
HDAC11-209	ENST00000418189	DLEC1	Q9Y238	1755 aa		32.99	■■■□□ 2.87
HDAC11-209	ENST00000418189	SCN7A	Q01118	1682 aa		32.99	■■■□□ 2.87
HDAC11-209	ENST00000418189	PPP2R1A	P30153	589 aa		32.99	■■■□□ 2.87
HDAC11-209	ENST00000418189		A0A087WZG4	1122 aa		32.98	■■■□□ 2.87
HDAC11-209	ENST00000418189	SERPINB2	P05120	415 aa		32.96	■■■□□ 2.87
HDAC11-209	ENST00000418189	FMNL2	Q96PY5	1086 aa		32.96	■■■□□ 2.87
HDAC11-209	ENST00000418189	C9orf131	Q5VYM1	1079 aa		32.94	■■■□□ 2.86
HDAC11-209	ENST00000418189	SBF1	O95248	1867 aa		32.94	■■■□□ 2.86
HDAC11-209	ENST00000418189	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.93	■■■□□ 2.86
HDAC11-209	ENST00000418189	HSPA6	P17066	643 aa		32.93	■■■□□ 2.86
HDAC11-209	ENST00000418189	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.93	■■■□□ 2.86
HDAC11-209	ENST00000418189	BTBD11	A6QL63	1104 aa		32.91	■■■□□ 2.86
HDAC11-209	ENST00000418189	IL6ST	P40189	918 aa	Predicted RBP	32.91	■■■□□ 2.86
HDAC11-209	ENST00000418189	CEP350	Q5VT06	3117 aa		32.91	■■■□□ 2.86
HDAC11-209	ENST00000418189	CARMIL3	Q8ND23	1372 aa		32.88	■■■□□ 2.85
HDAC11-209	ENST00000418189	KCNQ3	O43525	872 aa		32.88	■■■□□ 2.85
HDAC11-209	ENST00000418189	ANKRD31	Q8N7Z5	1873 aa		32.87	■■■□□ 2.85
HDAC11-209	ENST00000418189	BICDL1	Q6ZP65	573 aa		32.87	■■■□□ 2.85
HDAC11-209	ENST00000418189	RTF1	Q92541	710 aa	Known RBP	32.87	■■■□□ 2.85
HDAC11-209	ENST00000418189	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.87	■■■□□ 2.85
HDAC11-209	ENST00000418189	BCOR	Q6W2J9	1755 aa		32.87	■■■□□ 2.85
HDAC11-209	ENST00000418189	TBC1D9B	Q66K14	1250 aa		32.86	■■■□□ 2.85
HDAC11-209	ENST00000418189	RNF181	Q9P0P0	153 aa		32.86	■■■□□ 2.85
HDAC11-209	ENST00000418189	A1BG	P04217	495 aa		32.85	■■■□□ 2.85
HDAC11-209	ENST00000418189	NMRK2	Q9NPI5	230 aa		32.85	■■■□□ 2.85
HDAC11-209	ENST00000418189	TBC1D2B	Q9UPU7	963 aa		32.85	■■■□□ 2.85
HDAC11-209	ENST00000418189	TOMM70	O94826	608 aa		32.84	■■■□□ 2.85
HDAC11-209	ENST00000418189	MCM10	Q7L590	875 aa		32.84	■■■□□ 2.85
HDAC11-209	ENST00000418189	NPM2	Q86SE8	214 aa	Known RBP	32.84	■■■□□ 2.85
HDAC11-209	ENST00000418189	C2CD5	Q86YS7	1000 aa		32.84	■■■□□ 2.85
HDAC11-209	ENST00000418189	TTLL6	Q8N841	843 aa		32.83	■■■□□ 2.85
HDAC11-209	ENST00000418189		H0YIN7	160 aa		32.82	■■■□□ 2.84
HDAC11-209	ENST00000418189	HTATSF1	O43719	755 aa	Known RBP	32.82	■■■□□ 2.84
HDAC11-209	ENST00000418189	CAMTA2	O94983	1202 aa		32.81	■■■□□ 2.84
HDAC11-209	ENST00000418189	USP16	Q9Y5T5	823 aa		32.8	■■■□□ 2.84
HDAC11-209	ENST00000418189	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.8	■■■□□ 2.84
HDAC11-209	ENST00000418189	COL11A2	P13942	1736 aa	Predicted RBP	32.8	■■■□□ 2.84
HDAC11-209	ENST00000418189	PDZRN3	Q9UPQ7	1066 aa		32.79	■■■□□ 2.84
HDAC11-209	ENST00000418189	DLG5	Q8TDM6	1919 aa		32.79	■■■□□ 2.84
HDAC11-209	ENST00000418189	KDM2B	Q8NHM5	1336 aa		32.78	■■■□□ 2.84
HDAC11-209	ENST00000418189	SNRPA1	P09661	255 aa	Known RBP	32.78	■■■□□ 2.84
HDAC11-209	ENST00000418189	RASSF7	Q02833	373 aa		32.78	■■■□□ 2.84
HDAC11-209	ENST00000418189	PRR5L	Q6MZQ0	368 aa		32.78	■■■□□ 2.84
HDAC11-209	ENST00000418189	BRIP1	Q9BX63	1249 aa		32.78	■■■□□ 2.84
HDAC11-209	ENST00000418189	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.77	■■■□□ 2.84
HDAC11-209	ENST00000418189	DCTN1	Q14203	1278 aa		32.77	■■■□□ 2.84
HDAC11-209	ENST00000418189	DZIP3	Q86Y13	1208 aa	Known RBP	32.77	■■■□□ 2.84
HDAC11-209	ENST00000418189	CCDC88A	Q3V6T2	1871 aa		32.76	■■■□□ 2.84
HDAC11-209	ENST00000418189	PRAMEF22	A3QJZ6	481 aa		32.76	■■■□□ 2.83
HDAC11-209	ENST00000418189	PDE6B	P35913	854 aa		32.76	■■■□□ 2.83
HDAC11-209	ENST00000418189	SETDB2	Q96T68	719 aa		32.76	■■■□□ 2.83
HDAC11-209	ENST00000418189	LMNB1	P20700	586 aa		32.74	■■■□□ 2.83
HDAC11-209	ENST00000418189	RBM46	Q8TBY0	533 aa	Known RBP	32.74	■■■□□ 2.83
HDAC11-209	ENST00000418189	TIAM2	Q8IVF5	1701 aa		32.74	■■■□□ 2.83
HDAC11-209	ENST00000418189	LAMB4	A4D0S4	1761 aa		32.73	■■■□□ 2.83
HDAC11-209	ENST00000418189	CNBD1	Q8NA66	436 aa		32.73	■■■□□ 2.83
HDAC11-209	ENST00000418189	NEFM	P07197	916 aa		32.72	■■■□□ 2.83
HDAC11-209	ENST00000418189	PIP4K2A	P48426	406 aa	Predicted RBP	32.72	■■■□□ 2.83
HDAC11-209	ENST00000418189	APLP1	P51693	650 aa		32.72	■■■□□ 2.83
HDAC11-209	ENST00000418189	TAF7	Q15545	349 aa	Predicted RBP	32.72	■■■□□ 2.83
HDAC11-209	ENST00000418189	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.72	■■■□□ 2.83
HDAC11-209	ENST00000418189	CCDC24	Q8N4L8	307 aa		32.71	■■■□□ 2.83
HDAC11-209	ENST00000418189	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
HDAC11-209	ENST00000418189	KDM3B	Q7LBC6	1761 aa		32.7	■■■□□ 2.83
HDAC11-209	ENST00000418189	PRELP	P51888	382 aa		32.7	■■■□□ 2.83
HDAC11-209	ENST00000418189	CLEC4G	Q6UXB4	293 aa		32.7	■■■□□ 2.83
HDAC11-209	ENST00000418189	FER1L6	Q2WGJ9	1857 aa		32.69	■■■□□ 2.82
HDAC11-209	ENST00000418189	ARFGEF2	Q9Y6D5	1785 aa		32.69	■■■□□ 2.82
HDAC11-209	ENST00000418189	NFKBIE	O00221	500 aa		32.69	■■■□□ 2.82
HDAC11-209	ENST00000418189	ST5	P78524	1137 aa		32.69	■■■□□ 2.82
HDAC11-209	ENST00000418189	NPHP1	O15259	732 aa		32.68	■■■□□ 2.82
HDAC11-209	ENST00000418189	ZNF652	Q9Y2D9	606 aa		32.68	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms