RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ZBTB7BO15156 539 aaPredicted RBP26.33■■□□□ 1.81
CASC3-203ENST00000418132 FKBP5Q13451 457 aaPredicted RBP26.33■■□□□ 1.81
CASC3-203ENST00000418132 KDM2BQ8NHM5 1336 aa26.33■■□□□ 1.81
CASC3-203ENST00000418132 DDX21Q9NR30 783 aaKnown RBP eCLIP26.32■■□□□ 1.8
CASC3-203ENST00000418132 GJD4Q96KN9 370 aaPredicted RBP26.31■■□□□ 1.8
CASC3-203ENST00000418132 PCDHB15Q9Y5E8 787 aa26.31■■□□□ 1.8
CASC3-203ENST00000418132 USP16Q9Y5T5 823 aa26.31■■□□□ 1.8
CASC3-203ENST00000418132 F6X3S4 739 aa26.3■■□□□ 1.8
CASC3-203ENST00000418132 PDIA6Q15084 440 aa26.3■■□□□ 1.8
CASC3-203ENST00000418132 HYPKQ9NX55 129 aa26.3■■□□□ 1.8
CASC3-203ENST00000418132 ANXA1P04083 346 aa26.29■■□□□ 1.8
CASC3-203ENST00000418132 ATG3Q9NT62 314 aa26.29■■□□□ 1.8
CASC3-203ENST00000418132 TRPC5Q9UL62 973 aaPredicted RBP26.29■■□□□ 1.8
CASC3-203ENST00000418132 ASAP1Q9ULH1 1129 aa26.29■■□□□ 1.8
CASC3-203ENST00000418132 PXDNLA1KZ92 1463 aa26.29■■□□□ 1.8
CASC3-203ENST00000418132 N4BP2Q86UW6 1770 aaPredicted RBP26.29■■□□□ 1.8
CASC3-203ENST00000418132 PROSER3Q2NL68 480 aa26.29■■□□□ 1.8
CASC3-203ENST00000418132 CENPQQ7L2Z9 268 aaPredicted RBP26.29■■□□□ 1.8
CASC3-203ENST00000418132 PRIM1P49642 420 aaKnown RBP26.28■■□□□ 1.8
CASC3-203ENST00000418132 CCT4P50991 539 aaKnown RBP26.28■■□□□ 1.8
CASC3-203ENST00000418132 KAT6BQ8WYB5 2073 aa26.28■■□□□ 1.8
CASC3-203ENST00000418132 PTCD1O75127 700 aaKnown RBP26.27■■□□□ 1.8
CASC3-203ENST00000418132 ONECUT3O60422 494 aaPredicted RBP26.26■■□□□ 1.79
CASC3-203ENST00000418132 SLC4A10Q6U841 1118 aa26.26■■□□□ 1.79
CASC3-203ENST00000418132 VSIG10Q8N0Z9 540 aa26.26■■□□□ 1.79
CASC3-203ENST00000418132 SYTL4Q96C24 671 aaPredicted RBP26.26■■□□□ 1.79
CASC3-203ENST00000418132 ERBB4Q15303 1308 aa26.25■■□□□ 1.79
CASC3-203ENST00000418132 IGHDP01880 384 aa26.25■■□□□ 1.79
CASC3-203ENST00000418132 LRP10Q7Z4F1 713 aa26.23■■□□□ 1.79
CASC3-203ENST00000418132 ADCY9O60503 1353 aa26.23■■□□□ 1.79
CASC3-203ENST00000418132 A0A0G2JS52 829 aa26.22■■□□□ 1.79
CASC3-203ENST00000418132 MYT1Q01538 1121 aa26.22■■□□□ 1.79
CASC3-203ENST00000418132 PI4KAP2A4QPH2 592 aa26.22■■□□□ 1.79
CASC3-203ENST00000418132 PI4KAP1Q8N8J0 262 aa26.22■■□□□ 1.79
CASC3-203ENST00000418132 ACSBG1Q96GR2 724 aa26.21■■□□□ 1.79
CASC3-203ENST00000418132 RWDD1Q9H446 243 aaPredicted RBP26.21■■□□□ 1.79
CASC3-203ENST00000418132 QTRT2Q9H974 415 aaKnown RBP26.21■■□□□ 1.79
CASC3-203ENST00000418132 DNAAF4Q8WXU2 420 aa26.2■■□□□ 1.79
CASC3-203ENST00000418132 TEX13AQ9BXU3 409 aaPredicted RBP26.2■■□□□ 1.79
CASC3-203ENST00000418132 MYL6BP14649 208 aa26.2■■□□□ 1.78
CASC3-203ENST00000418132 KSR2Q6VAB6 950 aa26.2■■□□□ 1.78
CASC3-203ENST00000418132 HDAC1Q13547 482 aaPredicted RBP26.19■■□□□ 1.78
CASC3-203ENST00000418132 ATP10DQ9P241 1426 aa26.19■■□□□ 1.78
CASC3-203ENST00000418132 DDX58O95786 925 aaKnown RBP26.18■■□□□ 1.78
CASC3-203ENST00000418132 MEIS3Q99687 375 aa26.18■■□□□ 1.78
CASC3-203ENST00000418132 RBM42Q9BTD8 480 aaKnown RBP26.18■■□□□ 1.78
CASC3-203ENST00000418132 NBPF26B4DH59 902 aa26.17■■□□□ 1.78
CASC3-203ENST00000418132 NBPF14Q5TI25 921 aa26.17■■□□□ 1.78
CASC3-203ENST00000418132 NBPF10Q6P3W6 841 aaKnown RBP26.17■■□□□ 1.78
CASC3-203ENST00000418132 NBPF15Q8N660 670 aa26.17■■□□□ 1.78
CASC3-203ENST00000418132 BEND3Q5T5X7 828 aa26.16■■□□□ 1.78
CASC3-203ENST00000418132 XAGE3Q8WTP9 111 aa26.16■■□□□ 1.78
CASC3-203ENST00000418132 RBM19Q9Y4C8 960 aaKnown RBP26.16■■□□□ 1.78
CASC3-203ENST00000418132 AIMP1Q12904 312 aaKnown RBP26.16■■□□□ 1.78
CASC3-203ENST00000418132 COPS6Q7L5N1 327 aa26.16■■□□□ 1.78
CASC3-203ENST00000418132 SLC4A9Q96Q91 983 aa26.16■■□□□ 1.78
CASC3-203ENST00000418132 C1orf115Q9H7X2 142 aa26.16■■□□□ 1.78
CASC3-203ENST00000418132 MAP3K2Q9Y2U5 619 aa26.16■■□□□ 1.78
CASC3-203ENST00000418132 PIP4K2AP48426 406 aaPredicted RBP26.15■■□□□ 1.78
CASC3-203ENST00000418132 DNAJC10Q8IXB1 793 aa26.15■■□□□ 1.78
CASC3-203ENST00000418132 SRCIN1Q9C0H9 1055 aa26.15■■□□□ 1.78
CASC3-203ENST00000418132 KCNQ2O43526 872 aa26.15■■□□□ 1.78
CASC3-203ENST00000418132 A1BGP04217 495 aa26.15■■□□□ 1.78
CASC3-203ENST00000418132 SEPT12Q8IYM1 358 aa26.15■■□□□ 1.78
CASC3-203ENST00000418132 TJP1Q07157 1748 aa26.13■■□□□ 1.77
CASC3-203ENST00000418132 STARD3NLO95772 234 aa26.13■■□□□ 1.77
CASC3-203ENST00000418132 CICQ96RK0 1608 aaPredicted RBP26.12■■□□□ 1.77
CASC3-203ENST00000418132 GNAI3P08754 354 aa26.12■■□□□ 1.77
CASC3-203ENST00000418132 USP44Q9H0E7 712 aa26.11■■□□□ 1.77
CASC3-203ENST00000418132 NHSQ6T4R5 1651 aa26.11■■□□□ 1.77
CASC3-203ENST00000418132 ZNF772Q68DY9 489 aaPredicted RBP26.11■■□□□ 1.77
CASC3-203ENST00000418132 ANKRD13DQ6ZTN6 518 aa26.11■■□□□ 1.77
CASC3-203ENST00000418132 RIC3Q7Z5B4 369 aa26.11■■□□□ 1.77
CASC3-203ENST00000418132 SIRT2Q8IXJ6 389 aa26.11■■□□□ 1.77
CASC3-203ENST00000418132 FBXO41Q8TF61 875 aa26.11■■□□□ 1.77
CASC3-203ENST00000418132 SMARCC1Q92922 1105 aaPredicted RBP26.11■■□□□ 1.77
CASC3-203ENST00000418132 ALDH1L1O75891 902 aa26.1■■□□□ 1.77
CASC3-203ENST00000418132 CYP19A1P11511 503 aaPredicted RBP26.09■■□□□ 1.77
CASC3-203ENST00000418132 PALLDQ8WX93 1383 aa26.09■■□□□ 1.77
CASC3-203ENST00000418132 IBTKQ9P2D0 1353 aaPredicted RBP26.09■■□□□ 1.77
CASC3-203ENST00000418132 RPAP2Q8IXW5 612 aaPredicted RBP26.09■■□□□ 1.77
CASC3-203ENST00000418132 LINS1Q8NG48 757 aa26.09■■□□□ 1.77
CASC3-203ENST00000418132 ANKRD44Q8N8A2 993 aa26.08■■□□□ 1.77
CASC3-203ENST00000418132 ARFGEF2Q9Y6D5 1785 aa26.08■■□□□ 1.77
CASC3-203ENST00000418132 GNAI2P04899 355 aa26.07■■□□□ 1.76
CASC3-203ENST00000418132 SMC5Q8IY18 1101 aa26.07■■□□□ 1.76
CASC3-203ENST00000418132 PLBD2Q8NHP8 589 aa26.07■■□□□ 1.76
CASC3-203ENST00000418132 ZNF831Q5JPB2 1677 aa26.07■■□□□ 1.76
CASC3-203ENST00000418132 LOC102724428A0A0B4J2F2 783 aa26.07■■□□□ 1.76
CASC3-203ENST00000418132 SIK1P57059 783 aa26.07■■□□□ 1.76
CASC3-203ENST00000418132 CEP85Q6P2H3 762 aa26.07■■□□□ 1.76
CASC3-203ENST00000418132 METTL22Q9BUU2 404 aaPredicted RBP26.07■■□□□ 1.76
CASC3-203ENST00000418132 FAM182BQ5T319 152 aa26.06■■□□□ 1.76
CASC3-203ENST00000418132 SBF2Q86WG5 1849 aa26.06■■□□□ 1.76
CASC3-203ENST00000418132 NUP188Q5SRE5 1749 aa26.05■■□□□ 1.76
CASC3-203ENST00000418132 BTAF1O14981 1849 aa26.05■■□□□ 1.76
CASC3-203ENST00000418132 UBTFL1P0CB47 393 aaPredicted RBP26.04■■□□□ 1.76
CASC3-203ENST00000418132 NEXNQ0ZGT2 675 aa26.04■■□□□ 1.76
CASC3-203ENST00000418132 IGKV5-2P06315 115 aa26.04■■□□□ 1.76
CASC3-203ENST00000418132 RBM6P78332 1123 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms