RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
LINC00940-201ENST00000418006 TPM2P07951 284 aa17.06■□□□□ 0.32
LINC00940-201ENST00000418006 HSCBQ8IWL3 235 aa17.06■□□□□ 0.32
LINC00940-201ENST00000418006 ANKRD44Q8N8A2 993 aa17.06■□□□□ 0.32
LINC00940-201ENST00000418006 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
LINC00940-201ENST00000418006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC00940-201ENST00000418006 PI4KAP2A4QPH2 592 aa17.05■□□□□ 0.32
LINC00940-201ENST00000418006 CABP4P57796 275 aa17.05■□□□□ 0.32
LINC00940-201ENST00000418006 PI4KAP1Q8N8J0 262 aa17.05■□□□□ 0.32
LINC00940-201ENST00000418006 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
LINC00940-201ENST00000418006 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
LINC00940-201ENST00000418006 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
LINC00940-201ENST00000418006 HOXB7P09629 217 aa17.04■□□□□ 0.32
LINC00940-201ENST00000418006 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
LINC00940-201ENST00000418006 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
LINC00940-201ENST00000418006 DDIT3P35638 169 aa17.04■□□□□ 0.32
LINC00940-201ENST00000418006 RPAP2Q8IXW5 612 aaPredicted RBP17.04■□□□□ 0.32
LINC00940-201ENST00000418006 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
LINC00940-201ENST00000418006 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
LINC00940-201ENST00000418006 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
LINC00940-201ENST00000418006 GNAI2P04899 355 aa17.03■□□□□ 0.32
LINC00940-201ENST00000418006 MYL6BP14649 208 aa17.03■□□□□ 0.32
LINC00940-201ENST00000418006 IL2RBP14784 551 aa17.03■□□□□ 0.32
LINC00940-201ENST00000418006 PIP4K2AP48426 406 aaPredicted RBP17.03■□□□□ 0.32
LINC00940-201ENST00000418006 ATP10DQ9P241 1426 aa17.03■□□□□ 0.32
LINC00940-201ENST00000418006 ZNF496Q96IT1 587 aaPredicted RBP17.02■□□□□ 0.32
LINC00940-201ENST00000418006 OVOS2A0A0G2JMS6 1433 aa17.02■□□□□ 0.32
LINC00940-201ENST00000418006 DCTPP1Q9H773 170 aa17.02■□□□□ 0.31
LINC00940-201ENST00000418006 NHSL1Q5SYE7 1610 aa17.02■□□□□ 0.31
LINC00940-201ENST00000418006 SMARCA5O60264 1052 aaPredicted RBP17.01■□□□□ 0.31
LINC00940-201ENST00000418006 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
LINC00940-201ENST00000418006 TNPO1Q92973 898 aaKnown RBP17.01■□□□□ 0.31
LINC00940-201ENST00000418006 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
LINC00940-201ENST00000418006 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
LINC00940-201ENST00000418006 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
LINC00940-201ENST00000418006 DNAAF4Q8WXU2 420 aa17.01■□□□□ 0.31
LINC00940-201ENST00000418006 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
LINC00940-201ENST00000418006 SRCIN1Q9C0H9 1055 aa17.01■□□□□ 0.31
LINC00940-201ENST00000418006 PDCL3Q9H2J4 239 aa17.01■□□□□ 0.31
LINC00940-201ENST00000418006 ABCC6O95255 1503 aa17.01■□□□□ 0.31
LINC00940-201ENST00000418006 ROBO1Q9Y6N7 1651 aa17■□□□□ 0.31
LINC00940-201ENST00000418006 GNAI3P08754 354 aa17■□□□□ 0.31
LINC00940-201ENST00000418006 USP44Q9H0E7 712 aa17■□□□□ 0.31
LINC00940-201ENST00000418006 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
LINC00940-201ENST00000418006 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
LINC00940-201ENST00000418006 ADAMTS2O95450 1211 aa17■□□□□ 0.31
LINC00940-201ENST00000418006 UBTFL1P0CB47 393 aaPredicted RBP17■□□□□ 0.31
LINC00940-201ENST00000418006 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
LINC00940-201ENST00000418006 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
LINC00940-201ENST00000418006 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
LINC00940-201ENST00000418006 PNMA6EA0A0J9YXQ4 647 aa16.99■□□□□ 0.31
LINC00940-201ENST00000418006 HMMRO75330 724 aa16.99■□□□□ 0.31
LINC00940-201ENST00000418006 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
LINC00940-201ENST00000418006 USP16Q9Y5T5 823 aa16.99■□□□□ 0.31
LINC00940-201ENST00000418006 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
LINC00940-201ENST00000418006 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
LINC00940-201ENST00000418006 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
LINC00940-201ENST00000418006 NBPF7P0C2Y1 421 aaPredicted RBP16.97■□□□□ 0.31
LINC00940-201ENST00000418006 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
LINC00940-201ENST00000418006 GBP4Q96PP9 640 aa16.97■□□□□ 0.31
LINC00940-201ENST00000418006 ADCY9O60503 1353 aa16.97■□□□□ 0.31
LINC00940-201ENST00000418006 NUTM2BA6NNL0 878 aaPredicted RBP16.97■□□□□ 0.31
LINC00940-201ENST00000418006 NUTM2EB1AL46 878 aaPredicted RBP16.97■□□□□ 0.31
LINC00940-201ENST00000418006 SKOR2Q2VWA4 1001 aaPredicted RBP16.97■□□□□ 0.31
LINC00940-201ENST00000418006 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
LINC00940-201ENST00000418006 NUTM2AQ8IVF1 878 aaPredicted RBP16.97■□□□□ 0.31
LINC00940-201ENST00000418006 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
LINC00940-201ENST00000418006 SNX21Q969T3 373 aa16.97■□□□□ 0.31
LINC00940-201ENST00000418006 CWF19L2Q2TBE0 894 aaKnown RBP16.96■□□□□ 0.31
LINC00940-201ENST00000418006 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
LINC00940-201ENST00000418006 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
LINC00940-201ENST00000418006 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.31
LINC00940-201ENST00000418006 RAB3GAP1Q15042 981 aa16.96■□□□□ 0.31
LINC00940-201ENST00000418006 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
LINC00940-201ENST00000418006 SNRPA1P09661 255 aaKnown RBP16.95■□□□□ 0.3
LINC00940-201ENST00000418006 RBM25P49756 843 aaKnown RBP16.95■□□□□ 0.3
LINC00940-201ENST00000418006 PDIA6Q15084 440 aa16.95■□□□□ 0.3
LINC00940-201ENST00000418006 DDX21Q9NR30 783 aaKnown RBP eCLIP16.95■□□□□ 0.3
LINC00940-201ENST00000418006 ADAMTS7Q9UKP4 1686 aa16.95■□□□□ 0.3
LINC00940-201ENST00000418006 CCDC173Q0VFZ6 552 aa16.95■□□□□ 0.3
LINC00940-201ENST00000418006 PKD1L3Q7Z443 1732 aa16.95■□□□□ 0.3
LINC00940-201ENST00000418006 KSR2Q6VAB6 950 aa16.94■□□□□ 0.3
LINC00940-201ENST00000418006 COPS6Q7L5N1 327 aa16.94■□□□□ 0.3
LINC00940-201ENST00000418006 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
LINC00940-201ENST00000418006 PLEKHM2Q8IWE5 1019 aa16.94■□□□□ 0.3
LINC00940-201ENST00000418006 PPP1R9BQ96SB3 815 aa16.94■□□□□ 0.3
LINC00940-201ENST00000418006 C9orf78Q9NZ63 289 aaPredicted RBP16.94■□□□□ 0.3
LINC00940-201ENST00000418006 ATP8B2P98198 1209 aa16.93■□□□□ 0.3
LINC00940-201ENST00000418006 XAGE3Q8WTP9 111 aa16.93■□□□□ 0.3
LINC00940-201ENST00000418006 LTBP4Q8N2S1 1624 aa16.93■□□□□ 0.3
LINC00940-201ENST00000418006 PTMSP20962 102 aa16.93■□□□□ 0.3
LINC00940-201ENST00000418006 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
LINC00940-201ENST00000418006 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
LINC00940-201ENST00000418006 DDX58O95786 925 aaKnown RBP16.92■□□□□ 0.3
LINC00940-201ENST00000418006 ZSCAN30Q86W11 494 aa16.92■□□□□ 0.3
LINC00940-201ENST00000418006 OFD1O75665 1012 aa16.92■□□□□ 0.3
LINC00940-201ENST00000418006 BMP2KLQ5H9B9 411 aa16.92■□□□□ 0.3
LINC00940-201ENST00000418006 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
LINC00940-201ENST00000418006 C5P01031 1676 aa16.91■□□□□ 0.3
LINC00940-201ENST00000418006 ERVV-2B6SEH9 535 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms