RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 NARFQ9UHQ1 456 aa10.73□□□□□ -0.69
HLA-DPA1-241ENST00000417724 TJP1Q07157 1748 aa10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 SERPINB2P05120 415 aa10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 CYP19A1P11511 503 aaPredicted RBP10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 EIF4G2P78344 907 aaKnown RBP eCLIP10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 TRIM26Q12899 539 aaPredicted RBP10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 TNS4Q8IZW8 715 aa10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 SOS1Q07889 1333 aaPredicted RBP10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 AFDNP55196 1824 aaKnown RBP10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 CCDC88AQ3V6T2 1871 aa10.72□□□□□ -0.69
HLA-DPA1-241ENST00000417724 H0YIN7 160 aa10.71□□□□□ -0.69
HLA-DPA1-241ENST00000417724 IL13P35225 146 aa10.71□□□□□ -0.69
HLA-DPA1-241ENST00000417724 RASSF7Q02833 373 aa10.71□□□□□ -0.69
HLA-DPA1-241ENST00000417724 DPY19L2Q6NUT2 758 aa10.71□□□□□ -0.69
HLA-DPA1-241ENST00000417724 LGR6Q9HBX8 967 aa10.71□□□□□ -0.69
HLA-DPA1-241ENST00000417724 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.69
HLA-DPA1-241ENST00000417724 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.69
HLA-DPA1-241ENST00000417724 RNMTO43148 476 aaKnown RBP10.7□□□□□ -0.7
HLA-DPA1-241ENST00000417724 CAPN15O75808 1086 aa10.7□□□□□ -0.7
HLA-DPA1-241ENST00000417724 SLC39A6Q13433 755 aa10.7□□□□□ -0.7
HLA-DPA1-241ENST00000417724 C2CD5Q86YS7 1000 aa10.7□□□□□ -0.7
HLA-DPA1-241ENST00000417724 VSIG10Q8N0Z9 540 aa10.7□□□□□ -0.7
HLA-DPA1-241ENST00000417724 COL15A1P39059 1388 aa10.69□□□□□ -0.7
HLA-DPA1-241ENST00000417724 STARD3NLO95772 234 aa10.69□□□□□ -0.7
HLA-DPA1-241ENST00000417724 PRELPP51888 382 aa10.69□□□□□ -0.7
HLA-DPA1-241ENST00000417724 ZBTB1Q9Y2K1 713 aa10.69□□□□□ -0.7
HLA-DPA1-241ENST00000417724 DLEC1Q9Y238 1755 aa10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 CLSPNQ9HAW4 1339 aa10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 NRXN2Q9P2S2 1712 aa10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 A0A087WZG4 1122 aa10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 CANXP27824 592 aaKnown RBP10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 BCL2L12Q9HB09 334 aa10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 PDZRN3Q9UPQ7 1066 aa10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 VIRMAQ69YN4 1812 aaKnown RBP10.68□□□□□ -0.7
HLA-DPA1-241ENST00000417724 NFKBIEO00221 500 aa10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 HMOX1P09601 288 aa10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 HSPA1AP0DMV8 641 aaKnown RBP10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 HSPA1BP0DMV9 641 aaKnown RBP10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 PDE6BP35913 854 aa10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 BICDL1Q6ZP65 573 aa10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 TTC5Q8N0Z6 440 aa10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 BRIP1Q9BX63 1249 aa10.67□□□□□ -0.7
HLA-DPA1-241ENST00000417724 EIF5P55010 431 aaKnown RBP10.66□□□□□ -0.7
HLA-DPA1-241ENST00000417724 MTHFSDQ2M296 383 aaKnown RBP10.66□□□□□ -0.7
HLA-DPA1-241ENST00000417724 ERFEQ4G0M1 354 aa10.66□□□□□ -0.7
HLA-DPA1-241ENST00000417724 TEX13AQ9BXU3 409 aaPredicted RBP10.66□□□□□ -0.7
HLA-DPA1-241ENST00000417724 TIAM2Q8IVF5 1701 aa10.65□□□□□ -0.7
HLA-DPA1-241ENST00000417724 DICER1Q9UPY3 1922 aaKnown RBP10.65□□□□□ -0.7
HLA-DPA1-241ENST00000417724 POTECB2RU33 542 aa10.65□□□□□ -0.7
HLA-DPA1-241ENST00000417724 C21orf2O43822 256 aa10.65□□□□□ -0.7
HLA-DPA1-241ENST00000417724 NPM2Q86SE8 214 aaKnown RBP10.65□□□□□ -0.7
HLA-DPA1-241ENST00000417724 MRC1P22897 1456 aa10.65□□□□□ -0.7
HLA-DPA1-241ENST00000417724 DIAPH1O60610 1272 aaKnown RBP10.64□□□□□ -0.71
HLA-DPA1-241ENST00000417724 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
HLA-DPA1-241ENST00000417724 TBC1D9BQ66K14 1250 aa10.64□□□□□ -0.71
HLA-DPA1-241ENST00000417724 CHADLQ6NUI6 762 aa10.64□□□□□ -0.71
HLA-DPA1-241ENST00000417724 PCGF6Q9BYE7 350 aa10.64□□□□□ -0.71
HLA-DPA1-241ENST00000417724 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
HLA-DPA1-241ENST00000417724 CARMIL3Q8ND23 1372 aa10.64□□□□□ -0.71
HLA-DPA1-241ENST00000417724 NPHP1O15259 732 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 TEFQ10587 303 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 PRR5LQ6MZQ0 368 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 ZNF790Q6PG37 636 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 CNKSR1Q969H4 720 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 ZNF496Q96IT1 587 aaPredicted RBP10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 SETDB2Q96T68 719 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 TAOK3Q9H2K8 898 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 CREBZFQ9NS37 354 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 TBC1D2BQ9UPU7 963 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 FER1L6Q2WGJ9 1857 aa10.63□□□□□ -0.71
HLA-DPA1-241ENST00000417724 UBR2Q8IWV8 1755 aa10.62□□□□□ -0.71
HLA-DPA1-241ENST00000417724 LTBP3Q9NS15 1303 aa10.62□□□□□ -0.71
HLA-DPA1-241ENST00000417724 ANKRD31Q8N7Z5 1873 aa10.62□□□□□ -0.71
HLA-DPA1-241ENST00000417724 IL6STP40189 918 aaPredicted RBP10.62□□□□□ -0.71
HLA-DPA1-241ENST00000417724 SOGA3Q5TF21 947 aa10.62□□□□□ -0.71
HLA-DPA1-241ENST00000417724 STYK1Q6J9G0 422 aa10.62□□□□□ -0.71
HLA-DPA1-241ENST00000417724 CNBD1Q8NA66 436 aa10.62□□□□□ -0.71
HLA-DPA1-241ENST00000417724 PCNTO95613 3336 aa10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 IQCA1LA6NCM1 817 aa10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 GNAT3A8MTJ3 354 aa10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 DDNO94850 711 aaPredicted RBP10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 ST5P78524 1137 aa10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 IL17REQ8NFR9 667 aa10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 MKRN1Q9UHC7 482 aaKnown RBP10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 HEG1Q9ULI3 1381 aa10.61□□□□□ -0.71
HLA-DPA1-241ENST00000417724 SRGNP10124 158 aa10.6□□□□□ -0.71
HLA-DPA1-241ENST00000417724 PRPF40BQ6NWY9 871 aaKnown RBP10.6□□□□□ -0.71
HLA-DPA1-241ENST00000417724 GAS2L2Q8NHY3 880 aa10.6□□□□□ -0.71
HLA-DPA1-241ENST00000417724 MASTLQ96GX5 879 aa10.6□□□□□ -0.71
HLA-DPA1-241ENST00000417724 FMNL2Q96PY5 1086 aa10.6□□□□□ -0.71
HLA-DPA1-241ENST00000417724 SLX4Q8IY92 1834 aa10.6□□□□□ -0.71
HLA-DPA1-241ENST00000417724 U2SURPO15042 1029 aaKnown RBP10.59□□□□□ -0.71
HLA-DPA1-241ENST00000417724 CAMTA2O94983 1202 aa10.59□□□□□ -0.71
HLA-DPA1-241ENST00000417724 A1BGP04217 495 aa10.59□□□□□ -0.71
HLA-DPA1-241ENST00000417724 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
HLA-DPA1-241ENST00000417724 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms