RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
LRRTM1-205ENST00000417012 NBPF6Q5VWK0 638 aa15.53■□□□□ 0.08
LRRTM1-205ENST00000417012 RNF214Q8ND24 703 aa15.53■□□□□ 0.08
LRRTM1-205ENST00000417012 NBPF4Q96M43 638 aa15.53■□□□□ 0.08
LRRTM1-205ENST00000417012 TRIM6-TRIM34B2RNG4 842 aa15.53■□□□□ 0.08
LRRTM1-205ENST00000417012 NOL8Q76FK4 1167 aaKnown RBP15.53■□□□□ 0.08
LRRTM1-205ENST00000417012 TSPY26PQ9H489 355 aa15.53■□□□□ 0.08
LRRTM1-205ENST00000417012 MAP3K5Q99683 1374 aa15.52■□□□□ 0.08
LRRTM1-205ENST00000417012 LMOD2Q6P5Q4 547 aa15.52■□□□□ 0.08
LRRTM1-205ENST00000417012 RILPL2Q969X0 211 aa15.52■□□□□ 0.08
LRRTM1-205ENST00000417012 STK31Q9BXU1 1019 aa15.52■□□□□ 0.08
LRRTM1-205ENST00000417012 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.08
LRRTM1-205ENST00000417012 PHF14O94880 888 aa15.52■□□□□ 0.07
LRRTM1-205ENST00000417012 LRRC59Q96AG4 307 aaKnown RBP15.52■□□□□ 0.07
LRRTM1-205ENST00000417012 PALD1Q9ULE6 856 aa15.52■□□□□ 0.07
LRRTM1-205ENST00000417012 FKBP5Q13451 457 aaPredicted RBP15.52■□□□□ 0.07
LRRTM1-205ENST00000417012 PTMAP06454 111 aaKnown RBP15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 GNAI3P08754 354 aa15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 CHMLP26374 656 aa15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 MAP7D2Q96T17 732 aa15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 UQCRHLA0A096LP55 91 aa15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 HTATSF1O43719 755 aaKnown RBP15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 UQCRHP07919 91 aa15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 RBM10P98175 930 aaKnown RBP15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 FLIIQ13045 1269 aa15.51■□□□□ 0.07
LRRTM1-205ENST00000417012 IP6K1Q92551 441 aa15.5■□□□□ 0.07
LRRTM1-205ENST00000417012 RGPD2P0DJD1 1756 aa15.5■□□□□ 0.07
LRRTM1-205ENST00000417012 TAF7Q15545 349 aaPredicted RBP15.5■□□□□ 0.07
LRRTM1-205ENST00000417012 SRCIN1Q9C0H9 1055 aa15.5■□□□□ 0.07
LRRTM1-205ENST00000417012 LGR6Q9HBX8 967 aa15.5■□□□□ 0.07
LRRTM1-205ENST00000417012 TUBGCP6Q96RT7 1819 aa15.49■□□□□ 0.07
LRRTM1-205ENST00000417012 FAM13BQ9NYF5 915 aa15.49■□□□□ 0.07
LRRTM1-205ENST00000417012 CCDC30Q5VVM6 783 aa15.49■□□□□ 0.07
LRRTM1-205ENST00000417012 LRRC37A3O60309 1634 aa15.49■□□□□ 0.07
LRRTM1-205ENST00000417012 UPF3BQ9BZI7 483 aaKnown RBP15.49■□□□□ 0.07
LRRTM1-205ENST00000417012 USP54Q70EL1 1684 aa15.48■□□□□ 0.07
LRRTM1-205ENST00000417012 WDR33Q9C0J8 1336 aaKnown RBP15.48■□□□□ 0.07
LRRTM1-205ENST00000417012 ADGRL3Q9HAR2 1447 aa15.48■□□□□ 0.07
LRRTM1-205ENST00000417012 ATP8B2P98198 1209 aa15.48■□□□□ 0.07
LRRTM1-205ENST00000417012 STAP2Q9UGK3 403 aa15.48■□□□□ 0.07
LRRTM1-205ENST00000417012 ZNF142P52746 1687 aaPredicted RBP15.47■□□□□ 0.07
LRRTM1-205ENST00000417012 NFAT5O94916 1531 aa15.47■□□□□ 0.07
LRRTM1-205ENST00000417012 PNMA6EA0A0J9YXQ4 647 aa15.47■□□□□ 0.07
LRRTM1-205ENST00000417012 PHAXQ9H814 394 aaKnown RBP15.47■□□□□ 0.07
LRRTM1-205ENST00000417012 EIF2S2P20042 333 aaKnown RBP15.47■□□□□ 0.07
LRRTM1-205ENST00000417012 FOXD4L6Q3SYB3 417 aaPredicted RBP15.47■□□□□ 0.07
LRRTM1-205ENST00000417012 FOXD4L3Q6VB84 417 aaPredicted RBP15.47■□□□□ 0.07
LRRTM1-205ENST00000417012 IL17RAQ96F46 866 aa15.47■□□□□ 0.07
LRRTM1-205ENST00000417012 SASS6Q6UVJ0 657 aa15.46■□□□□ 0.07
LRRTM1-205ENST00000417012 FAM208AQ9UK61 1670 aaKnown RBP15.46■□□□□ 0.07
LRRTM1-205ENST00000417012 AOX1Q06278 1338 aa15.46■□□□□ 0.07
LRRTM1-205ENST00000417012 KCNQ3O43525 872 aa15.46■□□□□ 0.07
LRRTM1-205ENST00000417012 KIAA2012Q0VF49 1180 aa15.46■□□□□ 0.07
LRRTM1-205ENST00000417012 DYNC1I1O14576 645 aa15.46■□□□□ 0.06
LRRTM1-205ENST00000417012 EPB41L2O43491 1005 aaKnown RBP15.46■□□□□ 0.06
LRRTM1-205ENST00000417012 FAM184AQ8NB25 1140 aa15.46■□□□□ 0.06
LRRTM1-205ENST00000417012 GDPD2Q9HCC8 539 aa15.46■□□□□ 0.06
LRRTM1-205ENST00000417012 NPHP4O75161 1426 aaPredicted RBP15.45■□□□□ 0.06
LRRTM1-205ENST00000417012 GCP02774 474 aa15.45■□□□□ 0.06
LRRTM1-205ENST00000417012 HDGFL1Q5TGJ6 251 aa15.45■□□□□ 0.06
LRRTM1-205ENST00000417012 MPRIPQ6WCQ1 1025 aa15.45■□□□□ 0.06
LRRTM1-205ENST00000417012 LRRFIP2Q9Y608 721 aaKnown RBP15.45■□□□□ 0.06
LRRTM1-205ENST00000417012 ADAMTSL3P82987 1691 aa15.44■□□□□ 0.06
LRRTM1-205ENST00000417012 MTERF4Q7Z6M4 381 aaKnown RBP15.44■□□□□ 0.06
LRRTM1-205ENST00000417012 USP48Q86UV5 1035 aa15.44■□□□□ 0.06
LRRTM1-205ENST00000417012 KCNH5Q8NCM2 988 aa15.44■□□□□ 0.06
LRRTM1-205ENST00000417012 GADD45BO75293 160 aaPredicted RBP15.44■□□□□ 0.06
LRRTM1-205ENST00000417012 UNC5CLQ8IV45 518 aa15.44■□□□□ 0.06
LRRTM1-205ENST00000417012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.43■□□□□ 0.06
LRRTM1-205ENST00000417012 HSPA4P34932 840 aa15.43■□□□□ 0.06
LRRTM1-205ENST00000417012 ANXA1P04083 346 aa15.43■□□□□ 0.06
LRRTM1-205ENST00000417012 UVSSAQ2YD98 709 aa15.43■□□□□ 0.06
LRRTM1-205ENST00000417012 ZNF530Q6P9A1 599 aaPredicted RBP15.43■□□□□ 0.06
LRRTM1-205ENST00000417012 AXIN2Q9Y2T1 843 aa15.43■□□□□ 0.06
LRRTM1-205ENST00000417012 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
LRRTM1-205ENST00000417012 UBTFL1P0CB47 393 aaPredicted RBP15.42■□□□□ 0.06
LRRTM1-205ENST00000417012 CCDC183Q5T5S1 534 aa15.42■□□□□ 0.06
LRRTM1-205ENST00000417012 PROSER2Q86WR7 435 aaPredicted RBP15.42■□□□□ 0.06
LRRTM1-205ENST00000417012 CEMIPQ8WUJ3 1361 aa15.42■□□□□ 0.06
LRRTM1-205ENST00000417012 TMEM87AQ8NBN3 555 aa15.42■□□□□ 0.06
LRRTM1-205ENST00000417012 IL1RAPL2Q9NP60 686 aa15.42■□□□□ 0.06
LRRTM1-205ENST00000417012 DDX17Q92841 729 aaKnown RBP15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 EIF4A1P60842 406 aaKnown RBP15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 ARHGEF25Q86VW2 580 aa15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 USP44Q9H0E7 712 aa15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 CACNA1FO60840 1977 aa15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 PXDNLA1KZ92 1463 aa15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 RPAP1Q9BWH6 1393 aaPredicted RBP15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 CHPF2Q9P2E5 772 aa15.41■□□□□ 0.06
LRRTM1-205ENST00000417012 RAD50Q92878 1312 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 LETM1O95202 739 aaPredicted RBP15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 IL25Q9H293 177 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 RAB11FIP3O75154 756 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 PDE4CQ08493 712 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 TEFQ10587 303 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 KRT28Q7Z3Y7 464 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 NUTM1Q86Y26 1132 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms