RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
SMPD4P1-201ENST00000416717 ADCY9O60503 1353 aa13.36□□□□□ -0.27
SMPD4P1-201ENST00000416717 GNAI2P04899 355 aa13.36□□□□□ -0.27
SMPD4P1-201ENST00000416717 SRCIN1Q9C0H9 1055 aa13.36□□□□□ -0.27
SMPD4P1-201ENST00000416717 MAP3K2Q9Y2U5 619 aa13.36□□□□□ -0.27
SMPD4P1-201ENST00000416717 PTCD1O75127 700 aaKnown RBP13.35□□□□□ -0.27
SMPD4P1-201ENST00000416717 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
SMPD4P1-201ENST00000416717 PDIA6Q15084 440 aa13.35□□□□□ -0.27
SMPD4P1-201ENST00000416717 RPAP2Q8IXW5 612 aaPredicted RBP13.35□□□□□ -0.27
SMPD4P1-201ENST00000416717 USP44Q9H0E7 712 aa13.35□□□□□ -0.27
SMPD4P1-201ENST00000416717 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMPD4P1-201ENST00000416717 TOGARAM1Q9Y4F4 1720 aa13.35□□□□□ -0.27
SMPD4P1-201ENST00000416717 ANP32AP39687 249 aaKnown RBP13.34□□□□□ -0.27
SMPD4P1-201ENST00000416717 HYPKQ9NX55 129 aa13.34□□□□□ -0.27
SMPD4P1-201ENST00000416717 CCDC9Q9Y3X0 531 aaKnown RBP13.34□□□□□ -0.27
SMPD4P1-201ENST00000416717 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
SMPD4P1-201ENST00000416717 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
SMPD4P1-201ENST00000416717 GNAI3P08754 354 aa13.34□□□□□ -0.27
SMPD4P1-201ENST00000416717 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
SMPD4P1-201ENST00000416717 UBTFL1P0CB47 393 aaPredicted RBP13.33□□□□□ -0.28
SMPD4P1-201ENST00000416717 BEND3Q5T5X7 828 aa13.33□□□□□ -0.28
SMPD4P1-201ENST00000416717 AEBP2Q6ZN18 517 aaPredicted RBP13.33□□□□□ -0.28
SMPD4P1-201ENST00000416717 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
SMPD4P1-201ENST00000416717 PXDNLA1KZ92 1463 aa13.33□□□□□ -0.28
SMPD4P1-201ENST00000416717 ITGB4P16144 1822 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 PNMA6EA0A0J9YXQ4 647 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 SMARCA5O60264 1052 aaPredicted RBP13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 SEC24BO95487 1268 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 NBPF7P0C2Y1 421 aaPredicted RBP13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 CWF19L2Q2TBE0 894 aaKnown RBP13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 KSR2Q6VAB6 950 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 XAGE3Q8WTP9 111 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 A0A0G2JS52 829 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 MSH5O43196 834 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
SMPD4P1-201ENST00000416717 EXOC5O00471 708 aa13.31□□□□□ -0.28
SMPD4P1-201ENST00000416717 RIC3Q7Z5B4 369 aa13.31□□□□□ -0.28
SMPD4P1-201ENST00000416717 C16orf71Q8IYS4 520 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P1-201ENST00000416717 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P1-201ENST00000416717 NRAPQ86VF7 1730 aa13.31□□□□□ -0.28
SMPD4P1-201ENST00000416717 UBR2Q8IWV8 1755 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 HMMRO75330 724 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 EXOC6BQ9Y2D4 811 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 WNK3Q9BYP7 1800 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 GLI3P10071 1580 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 DDX58O95786 925 aaKnown RBP13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 PIGBQ92521 554 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 ASAP1Q9ULH1 1129 aa13.3□□□□□ -0.28
SMPD4P1-201ENST00000416717 C8orf37Q96NL8 207 aa13.29□□□□□ -0.28
SMPD4P1-201ENST00000416717 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
SMPD4P1-201ENST00000416717 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
SMPD4P1-201ENST00000416717 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
SMPD4P1-201ENST00000416717 PAPPAQ13219 1627 aa13.28□□□□□ -0.28
SMPD4P1-201ENST00000416717 KCPQ6ZWJ8 1503 aa13.28□□□□□ -0.28
SMPD4P1-201ENST00000416717 A1BGP04217 495 aa13.28□□□□□ -0.28
SMPD4P1-201ENST00000416717 OTUD7AQ8TE49 926 aaPredicted RBP13.28□□□□□ -0.28
SMPD4P1-201ENST00000416717 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
SMPD4P1-201ENST00000416717 NBPF26B4DH59 902 aa13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 NBPF14Q5TI25 921 aa13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 LRP10Q7Z4F1 713 aa13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 PPP1R42Q7Z4L9 355 aa13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 NBPF15Q8N660 670 aa13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 NGLY1Q96IV0 654 aa13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 MYD88Q99836 296 aa13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.28
SMPD4P1-201ENST00000416717 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.29
SMPD4P1-201ENST00000416717 DDB1Q16531 1140 aa13.27□□□□□ -0.29
SMPD4P1-201ENST00000416717 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
SMPD4P1-201ENST00000416717 IGKV5-2P06315 115 aa13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 LINS1Q8NG48 757 aa13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 IPO9Q96P70 1041 aaKnown RBP13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 ARFGEF2Q9Y6D5 1785 aa13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 SPATA31A5Q5VU36 1347 aa13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 SPATA31A7Q8IWB4 1347 aa13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 DOT1LQ8TEK3 1739 aa13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 NWD2Q9ULI1 1742 aa13.26□□□□□ -0.29
SMPD4P1-201ENST00000416717 SRGAP3O43295 1099 aa13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 PRIM1P49642 420 aaKnown RBP13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 PLEKHM2Q8IWE5 1019 aa13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 ATP5J2-PTCD1G3V325 749 aa13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
SMPD4P1-201ENST00000416717 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
SMPD4P1-201ENST00000416717 DNAJC10Q8IXB1 793 aa13.24□□□□□ -0.29
SMPD4P1-201ENST00000416717 CERKQ8TCT0 537 aa13.24□□□□□ -0.29
SMPD4P1-201ENST00000416717 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
SMPD4P1-201ENST00000416717 SLIT2O94813 1529 aa13.24□□□□□ -0.29
SMPD4P1-201ENST00000416717 JCADQ9P266 1359 aa13.24□□□□□ -0.29
SMPD4P1-201ENST00000416717 GRM8O00222 908 aa13.24□□□□□ -0.29
SMPD4P1-201ENST00000416717 FAM98CQ17RN3 349 aaKnown RBP13.24□□□□□ -0.29
SMPD4P1-201ENST00000416717 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms