RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 RNMTO43148 476 aaKnown RBP20.97■□□□□ 0.95
DDX56-202ENST00000415758 AMER1Q5JTC6 1135 aaPredicted RBP20.97■□□□□ 0.95
DDX56-202ENST00000415758 PCGF6Q9BYE7 350 aa20.97■□□□□ 0.95
DDX56-202ENST00000415758 NRXN2Q9P2S2 1712 aa20.96■□□□□ 0.95
DDX56-202ENST00000415758 VSIG10Q8N0Z9 540 aa20.96■□□□□ 0.95
DDX56-202ENST00000415758 ZC3H4Q9UPT8 1303 aaKnown RBP20.96■□□□□ 0.95
DDX56-202ENST00000415758 AFDNP55196 1824 aaKnown RBP20.95■□□□□ 0.94
DDX56-202ENST00000415758 VIRMAQ69YN4 1812 aaKnown RBP20.95■□□□□ 0.94
DDX56-202ENST00000415758 SLC39A6Q13433 755 aa20.95■□□□□ 0.94
DDX56-202ENST00000415758 NFIXQ14938 502 aa20.95■□□□□ 0.94
DDX56-202ENST00000415758 RRAGCQ9HB90 399 aa20.95■□□□□ 0.94
DDX56-202ENST00000415758 TNRC6CQ9HCJ0 1690 aaKnown RBP20.94■□□□□ 0.94
DDX56-202ENST00000415758 JMYQ8N9B5 988 aa20.94■□□□□ 0.94
DDX56-202ENST00000415758 COL15A1P39059 1388 aa20.94■□□□□ 0.94
DDX56-202ENST00000415758 KLRG1Q96E93 195 aa20.93■□□□□ 0.94
DDX56-202ENST00000415758 BCL2L12Q9HB09 334 aa20.93■□□□□ 0.94
DDX56-202ENST00000415758 MTHFSDQ2M296 383 aaKnown RBP20.92■□□□□ 0.94
DDX56-202ENST00000415758 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
DDX56-202ENST00000415758 DLEC1Q9Y238 1755 aa20.92■□□□□ 0.94
DDX56-202ENST00000415758 SERPINB2P05120 415 aa20.91■□□□□ 0.94
DDX56-202ENST00000415758 HMOX1P09601 288 aa20.91■□□□□ 0.94
DDX56-202ENST00000415758 UBR2Q8IWV8 1755 aa20.9■□□□□ 0.94
DDX56-202ENST00000415758 LMNB1P20700 586 aa20.89■□□□□ 0.93
DDX56-202ENST00000415758 HTRA3P83110 453 aa20.89■□□□□ 0.93
DDX56-202ENST00000415758 TTLL6Q8N841 843 aa20.89■□□□□ 0.93
DDX56-202ENST00000415758 SMC1BQ8NDV3 1235 aa20.89■□□□□ 0.93
DDX56-202ENST00000415758 GLTPD2A6NH11 291 aa20.88■□□□□ 0.93
DDX56-202ENST00000415758 PER1O15534 1290 aaPredicted RBP20.88■□□□□ 0.93
DDX56-202ENST00000415758 PRELPP51888 382 aa20.88■□□□□ 0.93
DDX56-202ENST00000415758 EIF5P55010 431 aaKnown RBP20.88■□□□□ 0.93
DDX56-202ENST00000415758 RASSF7Q02833 373 aa20.88■□□□□ 0.93
DDX56-202ENST00000415758 DIAPH1O60610 1272 aaKnown RBP20.87■□□□□ 0.93
DDX56-202ENST00000415758 H0YIN7 160 aa20.86■□□□□ 0.93
DDX56-202ENST00000415758 STARD3NLO95772 234 aa20.86■□□□□ 0.93
DDX56-202ENST00000415758 VEGFAP15692 232 aaPredicted RBP20.86■□□□□ 0.93
DDX56-202ENST00000415758 C2CD5Q86YS7 1000 aa20.86■□□□□ 0.93
DDX56-202ENST00000415758 PCNTO95613 3336 aa20.86■□□□□ 0.93
DDX56-202ENST00000415758 A0A087WZG4 1122 aa20.85■□□□□ 0.93
DDX56-202ENST00000415758 CANXP27824 592 aaKnown RBP20.85■□□□□ 0.93
DDX56-202ENST00000415758 CCDC88AQ3V6T2 1871 aa20.85■□□□□ 0.93
DDX56-202ENST00000415758 KIF7Q2M1P5 1343 aa20.84■□□□□ 0.93
DDX56-202ENST00000415758 PDZRN3Q9UPQ7 1066 aa20.84■□□□□ 0.93
DDX56-202ENST00000415758 CARMIL3Q8ND23 1372 aa20.84■□□□□ 0.93
DDX56-202ENST00000415758 NFKBIEO00221 500 aa20.83■□□□□ 0.93
DDX56-202ENST00000415758 TTC5Q8N0Z6 440 aa20.83■□□□□ 0.93
DDX56-202ENST00000415758 TEX13AQ9BXU3 409 aaPredicted RBP20.83■□□□□ 0.93
DDX56-202ENST00000415758 BRIP1Q9BX63 1249 aa20.82■□□□□ 0.92
DDX56-202ENST00000415758 ZNF790Q6PG37 636 aa20.81■□□□□ 0.92
DDX56-202ENST00000415758 IL17REQ8NFR9 667 aa20.81■□□□□ 0.92
DDX56-202ENST00000415758 ZNF496Q96IT1 587 aaPredicted RBP20.81■□□□□ 0.92
DDX56-202ENST00000415758 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
DDX56-202ENST00000415758 COL13A1Q5TAT6 717 aaPredicted RBP20.8■□□□□ 0.92
DDX56-202ENST00000415758 TBC1D9BQ66K14 1250 aa20.8■□□□□ 0.92
DDX56-202ENST00000415758 BICDL1Q6ZP65 573 aa20.8■□□□□ 0.92
DDX56-202ENST00000415758 TIAM2Q8IVF5 1701 aa20.8■□□□□ 0.92
DDX56-202ENST00000415758 HEG1Q9ULI3 1381 aa20.8■□□□□ 0.92
DDX56-202ENST00000415758 GNAT3A8MTJ3 354 aa20.79■□□□□ 0.92
DDX56-202ENST00000415758 POTECB2RU33 542 aa20.79■□□□□ 0.92
DDX56-202ENST00000415758 PDE6BP35913 854 aa20.79■□□□□ 0.92
DDX56-202ENST00000415758 IL6STP40189 918 aaPredicted RBP20.79■□□□□ 0.92
DDX56-202ENST00000415758 TEFQ10587 303 aa20.79■□□□□ 0.92
DDX56-202ENST00000415758 GAS2L2Q8NHY3 880 aa20.79■□□□□ 0.92
DDX56-202ENST00000415758 SIPA1L3O60292 1781 aaPredicted RBP20.79■□□□□ 0.92
DDX56-202ENST00000415758 COL3A1P02461 1466 aaPredicted RBP20.78■□□□□ 0.92
DDX56-202ENST00000415758 NPC1L1Q9UHC9 1359 aa20.78■□□□□ 0.92
DDX56-202ENST00000415758 CC2D1BQ5T0F9 858 aaKnown RBP20.78■□□□□ 0.92
DDX56-202ENST00000415758 PRR5LQ6MZQ0 368 aa20.78■□□□□ 0.92
DDX56-202ENST00000415758 DPY19L2Q6NUT2 758 aa20.78■□□□□ 0.92
DDX56-202ENST00000415758 DICER1Q9UPY3 1922 aaKnown RBP20.78■□□□□ 0.92
DDX56-202ENST00000415758 FER1L6Q2WGJ9 1857 aa20.77■□□□□ 0.92
DDX56-202ENST00000415758 SCN7AQ01118 1682 aa20.77■□□□□ 0.92
DDX56-202ENST00000415758 CCER1Q8TC90 406 aaPredicted RBP20.77■□□□□ 0.92
DDX56-202ENST00000415758 ZNF622Q969S3 477 aaKnown RBP eCLIP20.77■□□□□ 0.928e-7■■■□□ 14.9
DDX56-202ENST00000415758 TBC1D2BQ9UPU7 963 aa20.76■□□□□ 0.91
DDX56-202ENST00000415758 LTBP3Q9NS15 1303 aa20.76■□□□□ 0.91
DDX56-202ENST00000415758 CEMIPQ8WUJ3 1361 aa20.75■□□□□ 0.91
DDX56-202ENST00000415758 C21orf2O43822 256 aa20.75■□□□□ 0.91
DDX56-202ENST00000415758 FMNL2Q96PY5 1086 aa20.75■□□□□ 0.91
DDX56-202ENST00000415758 COL11A2P13942 1736 aaPredicted RBP20.74■□□□□ 0.91
DDX56-202ENST00000415758 ERFEQ4G0M1 354 aa20.74■□□□□ 0.91
DDX56-202ENST00000415758 SETDB2Q96T68 719 aa20.74■□□□□ 0.91
DDX56-202ENST00000415758 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
DDX56-202ENST00000415758 CAMTA2O94983 1202 aa20.73■□□□□ 0.91
DDX56-202ENST00000415758 A1BGP04217 495 aa20.73■□□□□ 0.91
DDX56-202ENST00000415758 STYK1Q6J9G0 422 aa20.72■□□□□ 0.91
DDX56-202ENST00000415758 CNKSR1Q969H4 720 aa20.72■□□□□ 0.91
DDX56-202ENST00000415758 ZNF330Q9Y3S2 320 aaPredicted RBP20.72■□□□□ 0.91
DDX56-202ENST00000415758 SRGNP10124 158 aa20.71■□□□□ 0.91
DDX56-202ENST00000415758 CCDC24Q8N4L8 307 aa20.71■□□□□ 0.91
DDX56-202ENST00000415758 CNBD1Q8NA66 436 aa20.71■□□□□ 0.91
DDX56-202ENST00000415758 SLX4Q8IY92 1834 aa20.7■□□□□ 0.9
DDX56-202ENST00000415758 SOGA3Q5TF21 947 aa20.7■□□□□ 0.9
DDX56-202ENST00000415758 NPM2Q86SE8 214 aaKnown RBP20.7■□□□□ 0.9
DDX56-202ENST00000415758 TAOK3Q9H2K8 898 aa20.7■□□□□ 0.9
DDX56-202ENST00000415758 BTBD11A6QL63 1104 aa20.69■□□□□ 0.9
DDX56-202ENST00000415758 CLEC4GQ6UXB4 293 aa20.69■□□□□ 0.9
DDX56-202ENST00000415758 MASTLQ96GX5 879 aa20.69■□□□□ 0.9
DDX56-202ENST00000415758 PHACTR3Q96KR7 559 aa20.69■□□□□ 0.9
DDX56-202ENST00000415758 ZNF219Q9P2Y4 722 aaPredicted RBP20.69■□□□□ 0.9
DDX56-202ENST00000415758 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms