RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 PAPPAQ13219 1627 aa18.07■□□□□ 0.48
HMGA1P1-201ENST00000415560 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
HMGA1P1-201ENST00000415560 DOT1LQ8TEK3 1739 aa18.06■□□□□ 0.48
HMGA1P1-201ENST00000415560 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
HMGA1P1-201ENST00000415560 ABCC4O15439 1325 aa18.06■□□□□ 0.48
HMGA1P1-201ENST00000415560 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
HMGA1P1-201ENST00000415560 B4GALNT3Q6L9W6 998 aa18.06■□□□□ 0.48
HMGA1P1-201ENST00000415560 G2E3Q7L622 706 aa18.06■□□□□ 0.48
HMGA1P1-201ENST00000415560 PELP1Q8IZL8 1130 aaKnown RBP18.06■□□□□ 0.48
HMGA1P1-201ENST00000415560 ATG3Q9NT62 314 aa18.06■□□□□ 0.48
HMGA1P1-201ENST00000415560 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
HMGA1P1-201ENST00000415560 DDX58O95786 925 aaKnown RBP18.05■□□□□ 0.48
HMGA1P1-201ENST00000415560 CCT4P50991 539 aaKnown RBP18.05■□□□□ 0.48
HMGA1P1-201ENST00000415560 SEPT12Q8IYM1 358 aa18.05■□□□□ 0.48
HMGA1P1-201ENST00000415560 SMARCC1Q92922 1105 aaPredicted RBP18.05■□□□□ 0.48
HMGA1P1-201ENST00000415560 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
HMGA1P1-201ENST00000415560 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
HMGA1P1-201ENST00000415560 USP16Q9Y5T5 823 aa18.05■□□□□ 0.48
HMGA1P1-201ENST00000415560 PRAMEF22A3QJZ6 481 aa18.04■□□□□ 0.48
HMGA1P1-201ENST00000415560 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
HMGA1P1-201ENST00000415560 ASAP1Q9ULH1 1129 aa18.04■□□□□ 0.48
HMGA1P1-201ENST00000415560 LAMB4A4D0S4 1761 aa18.04■□□□□ 0.48
HMGA1P1-201ENST00000415560 C5P01031 1676 aa18.03■□□□□ 0.48
HMGA1P1-201ENST00000415560 RBM6P78332 1123 aaKnown RBP18.03■□□□□ 0.48
HMGA1P1-201ENST00000415560 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
HMGA1P1-201ENST00000415560 STARD3NLO95772 234 aa18.02■□□□□ 0.48
HMGA1P1-201ENST00000415560 SLC4A10Q6U841 1118 aa18.02■□□□□ 0.48
HMGA1P1-201ENST00000415560 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.47
HMGA1P1-201ENST00000415560 MYL6BP14649 208 aa18■□□□□ 0.47
HMGA1P1-201ENST00000415560 ZBTB7BO15156 539 aaPredicted RBP17.99■□□□□ 0.47
HMGA1P1-201ENST00000415560 PDIA6Q15084 440 aa17.99■□□□□ 0.47
HMGA1P1-201ENST00000415560 KSR2Q6VAB6 950 aa17.99■□□□□ 0.47
HMGA1P1-201ENST00000415560 DNAAF4Q8WXU2 420 aa17.99■□□□□ 0.47
HMGA1P1-201ENST00000415560 ANXA1P04083 346 aa17.98■□□□□ 0.47
HMGA1P1-201ENST00000415560 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
HMGA1P1-201ENST00000415560 ZBTB40Q9NUA8 1239 aa17.98■□□□□ 0.47
HMGA1P1-201ENST00000415560 RGS12O14924 1447 aa17.98■□□□□ 0.47
HMGA1P1-201ENST00000415560 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 PI4KAP2A4QPH2 592 aa17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 F6X3S4 739 aa17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 RXRBP28702 533 aa17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 AIMP1Q12904 312 aaKnown RBP17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 KRT27Q7Z3Y8 459 aa17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 NPM2Q86SE8 214 aaKnown RBP17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 PI4KAP1Q8N8J0 262 aa17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 SRCIN1Q9C0H9 1055 aa17.97■□□□□ 0.47
HMGA1P1-201ENST00000415560 PROSER3Q2NL68 480 aa17.96■□□□□ 0.47
HMGA1P1-201ENST00000415560 FAM196AQ6ZSG2 479 aa17.96■□□□□ 0.47
HMGA1P1-201ENST00000415560 CENPQQ7L2Z9 268 aaPredicted RBP17.96■□□□□ 0.47
HMGA1P1-201ENST00000415560 COPS6Q7L5N1 327 aa17.96■□□□□ 0.47
HMGA1P1-201ENST00000415560 DNAJC10Q8IXB1 793 aa17.96■□□□□ 0.47
HMGA1P1-201ENST00000415560 KCNQ2O43526 872 aa17.95■□□□□ 0.46
HMGA1P1-201ENST00000415560 GNAI3P08754 354 aa17.95■□□□□ 0.46
HMGA1P1-201ENST00000415560 ATP6V1AP38606 617 aa17.95■□□□□ 0.46
HMGA1P1-201ENST00000415560 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
HMGA1P1-201ENST00000415560 ANKRD13DQ6ZTN6 518 aa17.95■□□□□ 0.46
HMGA1P1-201ENST00000415560 XAGE3Q8WTP9 111 aa17.95■□□□□ 0.46
HMGA1P1-201ENST00000415560 HDAC5Q9UQL6 1122 aa17.95■□□□□ 0.46
HMGA1P1-201ENST00000415560 A1BGP04217 495 aa17.94■□□□□ 0.46
HMGA1P1-201ENST00000415560 MAP3K2Q9Y2U5 619 aa17.94■□□□□ 0.46
HMGA1P1-201ENST00000415560 NHSQ6T4R5 1651 aa17.93■□□□□ 0.46
HMGA1P1-201ENST00000415560 PALLDQ8WX93 1383 aa17.93■□□□□ 0.46
HMGA1P1-201ENST00000415560 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
HMGA1P1-201ENST00000415560 ALDH1L1O75891 902 aa17.93■□□□□ 0.46
HMGA1P1-201ENST00000415560 HMGB2P26583 209 aaKnown RBP17.93■□□□□ 0.46
HMGA1P1-201ENST00000415560 SIK1P57059 783 aa17.93■□□□□ 0.46
HMGA1P1-201ENST00000415560 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
HMGA1P1-201ENST00000415560 CYP19A1P11511 503 aaPredicted RBP17.92■□□□□ 0.46
HMGA1P1-201ENST00000415560 PLBD2Q8NHP8 589 aa17.92■□□□□ 0.46
HMGA1P1-201ENST00000415560 PCDHB15Q9Y5E8 787 aa17.92■□□□□ 0.46
HMGA1P1-201ENST00000415560 SBF2Q86WG5 1849 aa17.92■□□□□ 0.46
HMGA1P1-201ENST00000415560 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 FAM182BQ5T319 152 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 BEND3Q5T5X7 828 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 NBPF14Q5TI25 921 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 LINS1Q8NG48 757 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 BCL11BQ9C0K0 894 aaPredicted RBP17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 BRWD3Q6RI45 1802 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 ADCY9O60503 1353 aa17.91■□□□□ 0.46
HMGA1P1-201ENST00000415560 ZNF831Q5JPB2 1677 aa17.9■□□□□ 0.46
HMGA1P1-201ENST00000415560 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
HMGA1P1-201ENST00000415560 LRP10Q7Z4F1 713 aa17.9■□□□□ 0.46
HMGA1P1-201ENST00000415560 RPAP2Q8IXW5 612 aaPredicted RBP17.9■□□□□ 0.46
HMGA1P1-201ENST00000415560 SLC4A9Q96Q91 983 aa17.9■□□□□ 0.46
HMGA1P1-201ENST00000415560 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
HMGA1P1-201ENST00000415560 BTAF1O14981 1849 aa17.89■□□□□ 0.45
HMGA1P1-201ENST00000415560 GNAI2P04899 355 aa17.89■□□□□ 0.45
HMGA1P1-201ENST00000415560 HDAC1Q13547 482 aaPredicted RBP17.89■□□□□ 0.45
HMGA1P1-201ENST00000415560 KIF6Q6ZMV9 814 aa17.89■□□□□ 0.45
HMGA1P1-201ENST00000415560 UBTFL1P0CB47 393 aaPredicted RBP17.88■□□□□ 0.45
HMGA1P1-201ENST00000415560 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
HMGA1P1-201ENST00000415560 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
HMGA1P1-201ENST00000415560 C9orf78Q9NZ63 289 aaPredicted RBP17.88■□□□□ 0.45
HMGA1P1-201ENST00000415560 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
HMGA1P1-201ENST00000415560 TJP1Q07157 1748 aa17.88■□□□□ 0.45
HMGA1P1-201ENST00000415560 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms