RNA–Protein interactions for RNA: ENST00000415023.1

ITSN1-213, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 519 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-213ENST00000415023 IFNL2Q8IZJ0 200 aa13.65□□□□□ -0.22
ITSN1-213ENST00000415023 SRP68Q9UHB9 627 aaKnown RBP13.65□□□□□ -0.22
ITSN1-213ENST00000415023 SCN11AQ9UI33 1791 aa13.64□□□□□ -0.23
ITSN1-213ENST00000415023 GLTPD2A6NH11 291 aa13.64□□□□□ -0.23
ITSN1-213ENST00000415023 POLRMTO00411 1230 aaKnown RBP13.64□□□□□ -0.23
ITSN1-213ENST00000415023 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
ITSN1-213ENST00000415023 AFDNP55196 1824 aaKnown RBP13.63□□□□□ -0.23
ITSN1-213ENST00000415023 VEGFAP15692 232 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-213ENST00000415023 TM4SF1P30408 202 aa13.63□□□□□ -0.23
ITSN1-213ENST00000415023 RFC4P35249 363 aa13.63□□□□□ -0.23
ITSN1-213ENST00000415023 ERVV-2B6SEH9 535 aa13.62□□□□□ -0.23
ITSN1-213ENST00000415023 NFKBIEO00221 500 aa13.62□□□□□ -0.23
ITSN1-213ENST00000415023 AMOTQ4VCS5 1084 aa13.62□□□□□ -0.23
ITSN1-213ENST00000415023 FOXN1O15353 648 aa13.61□□□□□ -0.23
ITSN1-213ENST00000415023 LMNB1P20700 586 aa13.61□□□□□ -0.23
ITSN1-213ENST00000415023 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
ITSN1-213ENST00000415023 PLEKHO1Q53GL0 409 aaPredicted RBP13.61□□□□□ -0.23
ITSN1-213ENST00000415023 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
ITSN1-213ENST00000415023 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
ITSN1-213ENST00000415023 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
ITSN1-213ENST00000415023 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-213ENST00000415023 INTS5Q6P9B9 1019 aaKnown RBP13.59□□□□□ -0.23
ITSN1-213ENST00000415023 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
ITSN1-213ENST00000415023 CNTNAP1P78357 1384 aa13.58□□□□□ -0.23
ITSN1-213ENST00000415023 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.23
ITSN1-213ENST00000415023 DIAPH1O60610 1272 aaKnown RBP13.58□□□□□ -0.24
ITSN1-213ENST00000415023 HMOX1P09601 288 aa13.58□□□□□ -0.24
ITSN1-213ENST00000415023 MRC1P22897 1456 aa13.58□□□□□ -0.24
ITSN1-213ENST00000415023 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.24
ITSN1-213ENST00000415023 FER1L6Q2WGJ9 1857 aa13.57□□□□□ -0.24
ITSN1-213ENST00000415023 PPP2R1AP30153 589 aa13.57□□□□□ -0.24
ITSN1-213ENST00000415023 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
ITSN1-213ENST00000415023 LGR6Q9HBX8 967 aa13.57□□□□□ -0.24
ITSN1-213ENST00000415023 ANKRD31Q8N7Z5 1873 aa13.57□□□□□ -0.24
ITSN1-213ENST00000415023 HSP90AB1P08238 724 aaKnown RBP13.56□□□□□ -0.24
ITSN1-213ENST00000415023 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
ITSN1-213ENST00000415023 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
ITSN1-213ENST00000415023 BCL2L12Q9HB09 334 aa13.56□□□□□ -0.24
ITSN1-213ENST00000415023 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
ITSN1-213ENST00000415023 SOS1Q07889 1333 aaPredicted RBP13.56□□□□□ -0.24
ITSN1-213ENST00000415023 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
ITSN1-213ENST00000415023 COL11A2P13942 1736 aaPredicted RBP13.56□□□□□ -0.24
ITSN1-213ENST00000415023 NFIXQ14938 502 aa13.55□□□□□ -0.24
ITSN1-213ENST00000415023 AKAP4Q5JQC9 854 aa13.55□□□□□ -0.24
ITSN1-213ENST00000415023 NFATC2IPQ8NCF5 419 aa13.55□□□□□ -0.24
ITSN1-213ENST00000415023 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
ITSN1-213ENST00000415023 ADAMTSL1Q8N6G6 1762 aa13.54□□□□□ -0.24
ITSN1-213ENST00000415023 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
ITSN1-213ENST00000415023 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
ITSN1-213ENST00000415023 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
ITSN1-213ENST00000415023 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
ITSN1-213ENST00000415023 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
ITSN1-213ENST00000415023 USPL1Q5W0Q7 1092 aa13.53□□□□□ -0.24
ITSN1-213ENST00000415023 PHACTR3Q96KR7 559 aa13.53□□□□□ -0.24
ITSN1-213ENST00000415023 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
ITSN1-213ENST00000415023 CABP4P57796 275 aa13.52□□□□□ -0.25
ITSN1-213ENST00000415023 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.25
ITSN1-213ENST00000415023 TTLL6Q8N841 843 aa13.52□□□□□ -0.25
ITSN1-213ENST00000415023 SLC52A2Q9HAB3 445 aa13.52□□□□□ -0.25
ITSN1-213ENST00000415023 WBP1LQ9NX94 342 aa13.52□□□□□ -0.25
ITSN1-213ENST00000415023 LTBP3Q9NS15 1303 aa13.52□□□□□ -0.25
ITSN1-213ENST00000415023 THSD7BQ9C0I4 1608 aa13.52□□□□□ -0.25
ITSN1-213ENST00000415023 CTCFP49711 727 aaPredicted RBP13.51□□□□□ -0.25
ITSN1-213ENST00000415023 FAM161AQ3B820 660 aa13.51□□□□□ -0.25
ITSN1-213ENST00000415023 IL17REQ8NFR9 667 aa13.51□□□□□ -0.25
ITSN1-213ENST00000415023 CEMIPQ8WUJ3 1361 aa13.5□□□□□ -0.25
ITSN1-213ENST00000415023 CYP19A1P11511 503 aaPredicted RBP13.5□□□□□ -0.25
ITSN1-213ENST00000415023 VEGFBP49765 207 aa13.5□□□□□ -0.25
ITSN1-213ENST00000415023 DNAJC10Q8IXB1 793 aa13.5□□□□□ -0.25
ITSN1-213ENST00000415023 ABHD8Q96I13 439 aa13.5□□□□□ -0.25
ITSN1-213ENST00000415023 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
ITSN1-213ENST00000415023 NARFQ9UHQ1 456 aa13.5□□□□□ -0.25
ITSN1-213ENST00000415023 COL15A1P39059 1388 aa13.49□□□□□ -0.25
ITSN1-213ENST00000415023 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
ITSN1-213ENST00000415023 SERPINB2P05120 415 aa13.49□□□□□ -0.25
ITSN1-213ENST00000415023 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
ITSN1-213ENST00000415023 C2CD5Q86YS7 1000 aa13.49□□□□□ -0.25
ITSN1-213ENST00000415023 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
ITSN1-213ENST00000415023 SCN7AQ01118 1682 aa13.48□□□□□ -0.25
ITSN1-213ENST00000415023 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
ITSN1-213ENST00000415023 RGS19P49795 217 aa13.48□□□□□ -0.25
ITSN1-213ENST00000415023 LBX1P52954 281 aa13.48□□□□□ -0.25
ITSN1-213ENST00000415023 L3MBTL3Q96JM7 780 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-213ENST00000415023 SCN4AP35499 1836 aa13.48□□□□□ -0.25
ITSN1-213ENST00000415023 DLG5Q8TDM6 1919 aa13.47□□□□□ -0.25
ITSN1-213ENST00000415023 TNRC18O15417 2968 aaPredicted RBP13.47□□□□□ -0.25
ITSN1-213ENST00000415023 DDNO94850 711 aaPredicted RBP13.47□□□□□ -0.25
ITSN1-213ENST00000415023 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
ITSN1-213ENST00000415023 SLC39A6Q13433 755 aa13.47□□□□□ -0.25
ITSN1-213ENST00000415023 DPY19L2Q6NUT2 758 aa13.47□□□□□ -0.25
ITSN1-213ENST00000415023 ZBTB1Q9Y2K1 713 aa13.47□□□□□ -0.25
ITSN1-213ENST00000415023 SLX4Q8IY92 1834 aa13.47□□□□□ -0.25
ITSN1-213ENST00000415023 PDE4DIPQ5VU43 2346 aa13.47□□□□□ -0.25
ITSN1-213ENST00000415023 ZPR1O75312 459 aa13.46□□□□□ -0.25
ITSN1-213ENST00000415023 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
ITSN1-213ENST00000415023 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
ITSN1-213ENST00000415023 RASSF10A6NK89 507 aa13.45□□□□□ -0.26
ITSN1-213ENST00000415023 GNAT3A8MTJ3 354 aa13.45□□□□□ -0.26
ITSN1-213ENST00000415023 LDHDQ86WU2 507 aa13.45□□□□□ -0.26
ITSN1-213ENST00000415023 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms