RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.83■□□□□ 0.76
SHMT2-202ENST00000414700 SLC4A9Q96Q91 983 aa19.83■□□□□ 0.76
SHMT2-202ENST00000414700 CHPF2Q9P2E5 772 aa19.83■□□□□ 0.76
SHMT2-202ENST00000414700 NHSQ6T4R5 1651 aa19.82■□□□□ 0.76
SHMT2-202ENST00000414700 BTAF1O14981 1849 aa19.82■□□□□ 0.76
SHMT2-202ENST00000414700 RLBP1P12271 317 aa19.82■□□□□ 0.76
SHMT2-202ENST00000414700 TRIM27P14373 513 aa19.82■□□□□ 0.76
SHMT2-202ENST00000414700 RBM42Q9BTD8 480 aaKnown RBP19.82■□□□□ 0.76
SHMT2-202ENST00000414700 KIF16BQ96L93 1317 aa19.82■□□□□ 0.76
SHMT2-202ENST00000414700 PANK1Q8TE04 598 aa19.81■□□□□ 0.76
SHMT2-202ENST00000414700 LAMB4A4D0S4 1761 aa19.81■□□□□ 0.76
SHMT2-202ENST00000414700 PROSER3Q2NL68 480 aa19.81■□□□□ 0.76
SHMT2-202ENST00000414700 ZKSCAN2Q63HK3 967 aa19.81■□□□□ 0.76
SHMT2-202ENST00000414700 STK31Q9BXU1 1019 aa19.81■□□□□ 0.76
SHMT2-202ENST00000414700 PIP4K2AP48426 406 aaPredicted RBP19.8■□□□□ 0.76
SHMT2-202ENST00000414700 ATF7IPQ6VMQ6 1270 aa19.8■□□□□ 0.76
SHMT2-202ENST00000414700 PHAXQ9H814 394 aaKnown RBP19.79■□□□□ 0.76
SHMT2-202ENST00000414700 PDIA6Q15084 440 aa19.78■□□□□ 0.76
SHMT2-202ENST00000414700 CRBNQ96SW2 442 aa19.78■□□□□ 0.76
SHMT2-202ENST00000414700 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
SHMT2-202ENST00000414700 DNAJC10Q8IXB1 793 aa19.78■□□□□ 0.76
SHMT2-202ENST00000414700 EXOC6Q8TAG9 804 aa19.78■□□□□ 0.76
SHMT2-202ENST00000414700 PALLDQ8WX93 1383 aa19.77■□□□□ 0.76
SHMT2-202ENST00000414700 TJP1Q07157 1748 aa19.76■□□□□ 0.75
SHMT2-202ENST00000414700 PDE3AQ14432 1141 aa19.76■□□□□ 0.75
SHMT2-202ENST00000414700 DBF4Q9UBU7 674 aaPredicted RBP19.76■□□□□ 0.75
SHMT2-202ENST00000414700 IPO8O15397 1037 aaKnown RBP19.76■□□□□ 0.75
SHMT2-202ENST00000414700 FLIIQ13045 1269 aa19.76■□□□□ 0.75
SHMT2-202ENST00000414700 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
SHMT2-202ENST00000414700 COG6Q9Y2V7 657 aa19.76■□□□□ 0.75
SHMT2-202ENST00000414700 MYL6BP14649 208 aa19.75■□□□□ 0.75
SHMT2-202ENST00000414700 DZIP1LQ8IYY4 767 aaKnown RBP19.75■□□□□ 0.75
SHMT2-202ENST00000414700 VSIG10Q8N0Z9 540 aa19.75■□□□□ 0.75
SHMT2-202ENST00000414700 LOC102724428A0A0B4J2F2 783 aa19.75■□□□□ 0.75
SHMT2-202ENST00000414700 A1BGP04217 495 aa19.75■□□□□ 0.75
SHMT2-202ENST00000414700 SIK1P57059 783 aa19.75■□□□□ 0.75
SHMT2-202ENST00000414700 ARHGAP45Q92619 1136 aa19.75■□□□□ 0.75
SHMT2-202ENST00000414700 TRIM37O94972 964 aa19.74■□□□□ 0.75
SHMT2-202ENST00000414700 KCNQ4P56696 695 aa19.74■□□□□ 0.75
SHMT2-202ENST00000414700 FTSJ3Q8IY81 847 aaKnown RBP19.74■□□□□ 0.75
SHMT2-202ENST00000414700 DDX21Q9NR30 783 aaKnown RBP eCLIP19.74■□□□□ 0.75
SHMT2-202ENST00000414700 NBPF26B4DH59 902 aa19.73■□□□□ 0.75
SHMT2-202ENST00000414700 F6X3S4 739 aa19.73■□□□□ 0.75
SHMT2-202ENST00000414700 NBPF14Q5TI25 921 aa19.73■□□□□ 0.75
SHMT2-202ENST00000414700 NBPF10Q6P3W6 841 aaKnown RBP19.73■□□□□ 0.75
SHMT2-202ENST00000414700 LRP10Q7Z4F1 713 aa19.73■□□□□ 0.75
SHMT2-202ENST00000414700 NBPF15Q8N660 670 aa19.73■□□□□ 0.75
SHMT2-202ENST00000414700 PTPRCP08575 1304 aa19.73■□□□□ 0.75
SHMT2-202ENST00000414700 FKBP5Q13451 457 aaPredicted RBP19.73■□□□□ 0.75
SHMT2-202ENST00000414700 TMEM57Q8N5G2 664 aa19.73■□□□□ 0.75
SHMT2-202ENST00000414700 ATP6V1AP38606 617 aa19.72■□□□□ 0.75
SHMT2-202ENST00000414700 ITPK1Q13572 414 aa19.72■□□□□ 0.75
SHMT2-202ENST00000414700 BCL11BQ9C0K0 894 aaPredicted RBP19.72■□□□□ 0.75
SHMT2-202ENST00000414700 ABCC4O15439 1325 aa19.72■□□□□ 0.75
SHMT2-202ENST00000414700 SMARCC1Q92922 1105 aaPredicted RBP19.71■□□□□ 0.75
SHMT2-202ENST00000414700 CHMP4AQ9BY43 222 aa19.71■□□□□ 0.75
SHMT2-202ENST00000414700 MYH14Q7Z406 1995 aaKnown RBP19.71■□□□□ 0.75
SHMT2-202ENST00000414700 CYP19A1P11511 503 aaPredicted RBP19.7■□□□□ 0.74
SHMT2-202ENST00000414700 AIMP1Q12904 312 aaKnown RBP19.7■□□□□ 0.74
SHMT2-202ENST00000414700 API5Q9BZZ5 524 aaKnown RBP19.7■□□□□ 0.74
SHMT2-202ENST00000414700 HYPKQ9NX55 129 aa19.7■□□□□ 0.74
SHMT2-202ENST00000414700 NOP58Q9Y2X3 529 aaKnown RBP19.7■□□□□ 0.74
SHMT2-202ENST00000414700 LY75O60449 1722 aa19.69■□□□□ 0.74
SHMT2-202ENST00000414700 TEX13AQ9BXU3 409 aaPredicted RBP19.69■□□□□ 0.74
SHMT2-202ENST00000414700 STARD3NLO95772 234 aa19.68■□□□□ 0.74
SHMT2-202ENST00000414700 MVPQ14764 893 aaKnown RBP19.68■□□□□ 0.74
SHMT2-202ENST00000414700 ITPRIPQ8IWB1 547 aa19.68■□□□□ 0.74
SHMT2-202ENST00000414700 CICQ96RK0 1608 aaPredicted RBP19.68■□□□□ 0.74
SHMT2-202ENST00000414700 COL5A3P25940 1745 aaPredicted RBP19.68■□□□□ 0.74
SHMT2-202ENST00000414700 PI4KAP2A4QPH2 592 aa19.68■□□□□ 0.74
SHMT2-202ENST00000414700 SLC4A10Q6U841 1118 aa19.68■□□□□ 0.74
SHMT2-202ENST00000414700 COPS6Q7L5N1 327 aa19.68■□□□□ 0.74
SHMT2-202ENST00000414700 PI4KAP1Q8N8J0 262 aa19.68■□□□□ 0.74
SHMT2-202ENST00000414700 XAGE3Q8WTP9 111 aa19.68■□□□□ 0.74
SHMT2-202ENST00000414700 ADCY9O60503 1353 aa19.68■□□□□ 0.74
SHMT2-202ENST00000414700 ZBTB1Q9Y2K1 713 aa19.67■□□□□ 0.74
SHMT2-202ENST00000414700 ZNF831Q5JPB2 1677 aa19.67■□□□□ 0.74
SHMT2-202ENST00000414700 MS4A1P11836 297 aa19.66■□□□□ 0.74
SHMT2-202ENST00000414700 ERBB4Q15303 1308 aa19.66■□□□□ 0.74
SHMT2-202ENST00000414700 ZNF330Q9Y3S2 320 aaPredicted RBP19.66■□□□□ 0.74
SHMT2-202ENST00000414700 LINC00116Q8NCU8 138 aa19.65■□□□□ 0.74
SHMT2-202ENST00000414700 TAF1LQ8IZX4 1826 aa19.65■□□□□ 0.74
SHMT2-202ENST00000414700 CRKLP46109 303 aaKnown RBP19.64■□□□□ 0.74
SHMT2-202ENST00000414700 INTS5Q6P9B9 1019 aaKnown RBP19.64■□□□□ 0.73
SHMT2-202ENST00000414700 TTLL7Q6ZT98 887 aa19.64■□□□□ 0.73
SHMT2-202ENST00000414700 CCNL1Q9UK58 526 aaPredicted RBP19.64■□□□□ 0.73
SHMT2-202ENST00000414700 INTS3Q68E01 1043 aaKnown RBP19.63■□□□□ 0.73
SHMT2-202ENST00000414700 MAP3K2Q9Y2U5 619 aa19.63■□□□□ 0.73
SHMT2-202ENST00000414700 KSR2Q6VAB6 950 aa19.63■□□□□ 0.73
SHMT2-202ENST00000414700 DNAAF4Q8WXU2 420 aa19.63■□□□□ 0.73
SHMT2-202ENST00000414700 LRRC4BQ9NT99 713 aa19.63■□□□□ 0.73
SHMT2-202ENST00000414700 TNS1Q9HBL0 1735 aaKnown RBP19.62■□□□□ 0.73
SHMT2-202ENST00000414700 N4BP2Q86UW6 1770 aaPredicted RBP19.62■□□□□ 0.73
SHMT2-202ENST00000414700 ARFGEF2Q9Y6D5 1785 aa19.62■□□□□ 0.73
SHMT2-202ENST00000414700 CCDC87Q9NVE4 849 aa19.62■□□□□ 0.73
SHMT2-202ENST00000414700 RREB1Q92766 1687 aa19.62■□□□□ 0.73
SHMT2-202ENST00000414700 DDX19BQ9UMR2 479 aa19.61■□□□□ 0.73
SHMT2-202ENST00000414700 B4GALNT3Q6L9W6 998 aa19.61■□□□□ 0.73
SHMT2-202ENST00000414700 ANKRD13DQ6ZTN6 518 aa19.61■□□□□ 0.73
SHMT2-202ENST00000414700 ZBTB7BO15156 539 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms