RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 SCN11AQ9UI33 1791 aa29.2■■■□□ 2.26
RHBDD3-204ENST00000414672 NFIXQ14938 502 aa29.19■■■□□ 2.26
RHBDD3-204ENST00000414672 KCPQ6ZWJ8 1503 aa29.19■■■□□ 2.26
RHBDD3-204ENST00000414672 MTHFSDQ2M296 383 aaKnown RBP29.18■■■□□ 2.26
RHBDD3-204ENST00000414672 ZBTB1Q9Y2K1 713 aa29.18■■■□□ 2.26
RHBDD3-204ENST00000414672 COL15A1P39059 1388 aa29.17■■■□□ 2.26
RHBDD3-204ENST00000414672 FSTL1Q12841 308 aa29.17■■■□□ 2.26
RHBDD3-204ENST00000414672 DIAPH1O60610 1272 aaKnown RBP29.16■■■□□ 2.26
RHBDD3-204ENST00000414672 CANXP27824 592 aaKnown RBP29.16■■■□□ 2.26
RHBDD3-204ENST00000414672 SERPINB2P05120 415 aa29.15■■■□□ 2.26
RHBDD3-204ENST00000414672 HTRA3P83110 453 aa29.14■■■□□ 2.26
RHBDD3-204ENST00000414672 RASSF7Q02833 373 aa29.14■■■□□ 2.26
RHBDD3-204ENST00000414672 CC2D1BQ5T0F9 858 aaKnown RBP29.13■■■□□ 2.25
RHBDD3-204ENST00000414672 TTC5Q8N0Z6 440 aa29.13■■■□□ 2.25
RHBDD3-204ENST00000414672 VSIG10Q8N0Z9 540 aa29.13■■■□□ 2.25
RHBDD3-204ENST00000414672 ADAMTS7Q9UKP4 1686 aa29.12■■■□□ 2.25
RHBDD3-204ENST00000414672 MRC1P22897 1456 aa29.12■■■□□ 2.25
RHBDD3-204ENST00000414672 BICDL1Q6ZP65 573 aa29.12■■■□□ 2.25
RHBDD3-204ENST00000414672 BCL2L12Q9HB09 334 aa29.12■■■□□ 2.25
RHBDD3-204ENST00000414672 KIF7Q2M1P5 1343 aa29.12■■■□□ 2.25
RHBDD3-204ENST00000414672 STARD3NLO95772 234 aa29.11■■■□□ 2.25
RHBDD3-204ENST00000414672 C2CD5Q86YS7 1000 aa29.11■■■□□ 2.25
RHBDD3-204ENST00000414672 TTLL6Q8N841 843 aa29.11■■■□□ 2.25
RHBDD3-204ENST00000414672 H0YIN7 160 aa29.09■■■□□ 2.25
RHBDD3-204ENST00000414672 LMNB1P20700 586 aa29.09■■■□□ 2.25
RHBDD3-204ENST00000414672 CNGB1Q14028 1251 aaPredicted RBP29.09■■■□□ 2.25
RHBDD3-204ENST00000414672 SMC1BQ8NDV3 1235 aa29.08■■■□□ 2.25
RHBDD3-204ENST00000414672 KLRG1Q96E93 195 aa29.08■■■□□ 2.25
RHBDD3-204ENST00000414672 A0A087WZG4 1122 aa29.07■■■□□ 2.24
RHBDD3-204ENST00000414672 ZNF330Q9Y3S2 320 aaPredicted RBP29.07■■■□□ 2.24
RHBDD3-204ENST00000414672 ZC3H4Q9UPT8 1303 aaKnown RBP29.06■■■□□ 2.24
RHBDD3-204ENST00000414672 U2SURPO15042 1029 aaKnown RBP29.06■■■□□ 2.24
RHBDD3-204ENST00000414672 TEFQ10587 303 aa29.06■■■□□ 2.24
RHBDD3-204ENST00000414672 WDR90Q96KV7 1748 aa29.06■■■□□ 2.24
RHBDD3-204ENST00000414672 PER1O15534 1290 aaPredicted RBP29.04■■■□□ 2.24
RHBDD3-204ENST00000414672 EIF5P55010 431 aaKnown RBP29.04■■■□□ 2.24
RHBDD3-204ENST00000414672 GLTPD2A6NH11 291 aa29.03■■■□□ 2.24
RHBDD3-204ENST00000414672 SBF1O95248 1867 aa29.03■■■□□ 2.24
RHBDD3-204ENST00000414672 AFDNP55196 1824 aaKnown RBP29.03■■■□□ 2.24
RHBDD3-204ENST00000414672 GNAT3A8MTJ3 354 aa29.02■■■□□ 2.24
RHBDD3-204ENST00000414672 VEGFAP15692 232 aaPredicted RBP29.02■■■□□ 2.24
RHBDD3-204ENST00000414672 PRELPP51888 382 aa29.02■■■□□ 2.24
RHBDD3-204ENST00000414672 ZNF622Q969S3 477 aaKnown RBP eCLIP29.02■■■□□ 2.24
RHBDD3-204ENST00000414672 ZNF496Q96IT1 587 aaPredicted RBP29.02■■■□□ 2.24
RHBDD3-204ENST00000414672 TEX13AQ9BXU3 409 aaPredicted RBP29.02■■■□□ 2.24
RHBDD3-204ENST00000414672 CARMIL3Q8ND23 1372 aa29.01■■■□□ 2.24
RHBDD3-204ENST00000414672 TBC1D9BQ66K14 1250 aa29.01■■■□□ 2.23
RHBDD3-204ENST00000414672 NPM2Q86SE8 214 aaKnown RBP29.01■■■□□ 2.23
RHBDD3-204ENST00000414672 GAS2L2Q8NHY3 880 aa29.01■■■□□ 2.23
RHBDD3-204ENST00000414672 ZNF219Q9P2Y4 722 aaPredicted RBP29.01■■■□□ 2.23
RHBDD3-204ENST00000414672 TBC1D2BQ9UPU7 963 aa29.01■■■□□ 2.23
RHBDD3-204ENST00000414672 TNRC6CQ9HCJ0 1690 aaKnown RBP29.01■■■□□ 2.23
RHBDD3-204ENST00000414672 ZNF790Q6PG37 636 aa29■■■□□ 2.23
RHBDD3-204ENST00000414672 IL17REQ8NFR9 667 aa29■■■□□ 2.23
RHBDD3-204ENST00000414672 PDE6BP35913 854 aa28.99■■■□□ 2.23
RHBDD3-204ENST00000414672 JMYQ8N9B5 988 aa28.99■■■□□ 2.23
RHBDD3-204ENST00000414672 NRXN2Q9P2S2 1712 aa28.99■■■□□ 2.23
RHBDD3-204ENST00000414672 NPHP1O15259 732 aa28.98■■■□□ 2.23
RHBDD3-204ENST00000414672 CCDC24Q8N4L8 307 aa28.98■■■□□ 2.23
RHBDD3-204ENST00000414672 HEG1Q9ULI3 1381 aa28.98■■■□□ 2.23
RHBDD3-204ENST00000414672 VIRMAQ69YN4 1812 aaKnown RBP28.97■■■□□ 2.23
RHBDD3-204ENST00000414672 NFKBIEO00221 500 aa28.97■■■□□ 2.23
RHBDD3-204ENST00000414672 BRIP1Q9BX63 1249 aa28.97■■■□□ 2.23
RHBDD3-204ENST00000414672 DPY19L2Q6NUT2 758 aa28.96■■■□□ 2.23
RHBDD3-204ENST00000414672 FMNL2Q96PY5 1086 aa28.96■■■□□ 2.23
RHBDD3-204ENST00000414672 PDZRN3Q9UPQ7 1066 aa28.96■■■□□ 2.23
RHBDD3-204ENST00000414672 C21orf2O43822 256 aa28.95■■■□□ 2.22
RHBDD3-204ENST00000414672 UBR2Q8IWV8 1755 aa28.94■■■□□ 2.22
RHBDD3-204ENST00000414672 IL6STP40189 918 aaPredicted RBP28.94■■■□□ 2.22
RHBDD3-204ENST00000414672 PRR5LQ6MZQ0 368 aa28.94■■■□□ 2.22
RHBDD3-204ENST00000414672 SETDB2Q96T68 719 aa28.94■■■□□ 2.22
RHBDD3-204ENST00000414672 A1BGP04217 495 aa28.93■■■□□ 2.22
RHBDD3-204ENST00000414672 DLEC1Q9Y238 1755 aa28.93■■■□□ 2.22
RHBDD3-204ENST00000414672 ERFEQ4G0M1 354 aa28.92■■■□□ 2.22
RHBDD3-204ENST00000414672 COL13A1Q5TAT6 717 aaPredicted RBP28.92■■■□□ 2.22
RHBDD3-204ENST00000414672 CNBD1Q8NA66 436 aa28.91■■■□□ 2.22
RHBDD3-204ENST00000414672 BTBD11A6QL63 1104 aa28.9■■■□□ 2.22
RHBDD3-204ENST00000414672 COL3A1P02461 1466 aaPredicted RBP28.89■■■□□ 2.22
RHBDD3-204ENST00000414672 ST5P78524 1137 aa28.88■■■□□ 2.21
RHBDD3-204ENST00000414672 KCNQ3O43525 872 aa28.87■■■□□ 2.21
RHBDD3-204ENST00000414672 CAMTA2O94983 1202 aa28.87■■■□□ 2.21
RHBDD3-204ENST00000414672 PRKAR2BP31323 418 aa28.87■■■□□ 2.21
RHBDD3-204ENST00000414672 DZIP3Q86Y13 1208 aaKnown RBP28.87■■■□□ 2.21
RHBDD3-204ENST00000414672 CNKSR1Q969H4 720 aa28.87■■■□□ 2.21
RHBDD3-204ENST00000414672 PHACTR3Q96KR7 559 aa28.87■■■□□ 2.21
RHBDD3-204ENST00000414672 CFAP53Q96M91 514 aa28.87■■■□□ 2.21
RHBDD3-204ENST00000414672 NPC1L1Q9UHC9 1359 aa28.87■■■□□ 2.21
RHBDD3-204ENST00000414672 POTECB2RU33 542 aa28.86■■■□□ 2.21
RHBDD3-204ENST00000414672 TAOK3Q9H2K8 898 aa28.86■■■□□ 2.21
RHBDD3-204ENST00000414672 TIAM2Q8IVF5 1701 aa28.86■■■□□ 2.21
RHBDD3-204ENST00000414672 PIP4K2AP48426 406 aaPredicted RBP28.84■■■□□ 2.21
RHBDD3-204ENST00000414672 STYK1Q6J9G0 422 aa28.84■■■□□ 2.21
RHBDD3-204ENST00000414672 CCDC88AQ3V6T2 1871 aa28.84■■■□□ 2.21
RHBDD3-204ENST00000414672 CEMIPQ8WUJ3 1361 aa28.84■■■□□ 2.21
RHBDD3-204ENST00000414672 PRPF40BQ6NWY9 871 aaKnown RBP28.83■■■□□ 2.21
RHBDD3-204ENST00000414672 USP16Q9Y5T5 823 aa28.83■■■□□ 2.21
RHBDD3-204ENST00000414672 SCN7AQ01118 1682 aa28.83■■■□□ 2.21
RHBDD3-204ENST00000414672 ANKRD31Q8N7Z5 1873 aa28.83■■■□□ 2.2
RHBDD3-204ENST00000414672 CAPN15O75808 1086 aa28.82■■■□□ 2.2
RHBDD3-204ENST00000414672 SRGNP10124 158 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms