RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SYMPKQ92797 1274 aaKnown RBP6.93□□□□□ -1.3
VPS41-205ENST00000414632 PBXIP1Q96AQ6 731 aa6.93□□□□□ -1.3
VPS41-205ENST00000414632 LRP6O75581 1613 aa6.93□□□□□ -1.3
VPS41-205ENST00000414632 RALGAPBQ86X10 1494 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 CFHP08603 1231 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 ATP6V1AP38606 617 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 SAMD7Q7Z3H4 446 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 PMFBP1Q8TBY8 1022 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 EPS8L1Q8TE68 723 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 MARVELD3Q96A59 401 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 SIRT1Q96EB6 747 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 PPP1R12CQ9BZL4 782 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 ALG2Q9H553 416 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 PRR36Q9H6K5 1346 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 ABCA3Q99758 1704 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 TRPM3Q9HCF6 1732 aaPredicted RBP6.92□□□□□ -1.3
VPS41-205ENST00000414632 MARF1Q9Y4F3 1742 aaKnown RBP6.92□□□□□ -1.3
VPS41-205ENST00000414632 JCADQ9P266 1359 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 ATP7BP35670 1465 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 PXDNQ92626 1479 aa6.92□□□□□ -1.3
VPS41-205ENST00000414632 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.91□□□□□ -1.3
VPS41-205ENST00000414632 WASLO00401 505 aaPredicted RBP6.91□□□□□ -1.3
VPS41-205ENST00000414632 FOXO3O43524 673 aa6.91□□□□□ -1.3
VPS41-205ENST00000414632 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
VPS41-205ENST00000414632 POTEEQ6S8J3 1075 aa6.91□□□□□ -1.3
VPS41-205ENST00000414632 PRR7Q8TB68 274 aa6.91□□□□□ -1.3
VPS41-205ENST00000414632 AXIN2Q9Y2T1 843 aa6.91□□□□□ -1.3
VPS41-205ENST00000414632 CENPJQ9HC77 1338 aaPredicted RBP6.91□□□□□ -1.3
VPS41-205ENST00000414632 COL22A1Q8NFW1 1626 aaPredicted RBP6.9□□□□□ -1.3
VPS41-205ENST00000414632 SRPK2P78362 688 aaKnown RBP6.9□□□□□ -1.3
VPS41-205ENST00000414632 VARS2Q5ST30 1063 aaKnown RBP6.9□□□□□ -1.3
VPS41-205ENST00000414632 CDAN1Q8IWY9 1227 aa6.9□□□□□ -1.3
VPS41-205ENST00000414632 CDK19Q9BWU1 502 aa6.9□□□□□ -1.3
VPS41-205ENST00000414632 CARD11Q9BXL7 1154 aa6.9□□□□□ -1.3
VPS41-205ENST00000414632 VPS9D1Q9Y2B5 631 aa6.9□□□□□ -1.3
VPS41-205ENST00000414632 ERBB3P21860 1342 aa6.9□□□□□ -1.3
VPS41-205ENST00000414632 PNPLA6Q8IY17 1366 aa6.9□□□□□ -1.31
VPS41-205ENST00000414632 ALS2Q96Q42 1657 aa6.9□□□□□ -1.31
VPS41-205ENST00000414632 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
VPS41-205ENST00000414632 NR6A1Q15406 480 aa6.89□□□□□ -1.31
VPS41-205ENST00000414632 GZF1Q9H116 711 aaPredicted RBP6.89□□□□□ -1.31
VPS41-205ENST00000414632 SOS2Q07890 1332 aaPredicted RBP6.89□□□□□ -1.31
VPS41-205ENST00000414632 NPHP3Q7Z494 1330 aa6.89□□□□□ -1.31
VPS41-205ENST00000414632 ANKARQ7Z5J8 1434 aa6.89□□□□□ -1.31
VPS41-205ENST00000414632 CRYBG1Q9Y4K1 1723 aa6.89□□□□□ -1.31
VPS41-205ENST00000414632 AKAP12Q02952 1782 aa6.89□□□□□ -1.31
VPS41-205ENST00000414632 EIF3AQ14152 1382 aaKnown RBP6.88□□□□□ -1.31
VPS41-205ENST00000414632 GPRASP1Q5JY77 1395 aa6.88□□□□□ -1.31
VPS41-205ENST00000414632 PALM3A6NDB9 673 aaPredicted RBP6.88□□□□□ -1.31
VPS41-205ENST00000414632 RNF40O75150 1001 aa6.88□□□□□ -1.31
VPS41-205ENST00000414632 LMOD1P29536 600 aaPredicted RBP6.88□□□□□ -1.31
VPS41-205ENST00000414632 MEX3CQ5U5Q3 659 aaKnown RBP6.88□□□□□ -1.31
VPS41-205ENST00000414632 KRT28Q7Z3Y7 464 aa6.88□□□□□ -1.31
VPS41-205ENST00000414632 LAPTM4BQ86VI4 370 aa6.88□□□□□ -1.31
VPS41-205ENST00000414632 LRRC59Q96AG4 307 aaKnown RBP6.88□□□□□ -1.31
VPS41-205ENST00000414632 NUDT16Q96DE0 195 aaKnown RBP6.88□□□□□ -1.31
VPS41-205ENST00000414632 TFIP11Q9UBB9 837 aaKnown RBP6.88□□□□□ -1.31
VPS41-205ENST00000414632 PHRF1Q9P1Y6 1649 aaKnown RBP6.87□□□□□ -1.31
VPS41-205ENST00000414632 PPIP5K1Q6PFW1 1433 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 FAM205CA6NFA0 338 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 ADAMTS2O95450 1211 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 CSB-PGBD3P0DP91 1061 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 SOX11P35716 441 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 PSME1Q06323 249 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 KMT5BQ4FZB7 885 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 RETREG3Q86VR2 466 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 NGDNQ8NEJ9 315 aaKnown RBP6.87□□□□□ -1.31
VPS41-205ENST00000414632 PLCH1Q4KWH8 1693 aa6.87□□□□□ -1.31
VPS41-205ENST00000414632 TNS3Q68CZ2 1445 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 SPATA31A6Q5VVP1 1343 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 CLSPNQ9HAW4 1339 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 PBX2P40425 430 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 SEMA3FQ13275 785 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 PUS10Q3MIT2 529 aaKnown RBP6.86□□□□□ -1.31
VPS41-205ENST00000414632 MORN1Q5T089 497 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 TMCO4Q5TGY1 634 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 PNMA1Q8ND90 353 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 ZFRQ96KR1 1074 aaKnown RBP6.86□□□□□ -1.31
VPS41-205ENST00000414632 C8orf37Q96NL8 207 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 NBPF3Q9H094 633 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 RGS17Q9UGC6 210 aaPredicted RBP6.86□□□□□ -1.31
VPS41-205ENST00000414632 SLC27A5Q9Y2P5 690 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 MON2Q7Z3U7 1717 aa6.86□□□□□ -1.31
VPS41-205ENST00000414632 USP47Q96K76 1375 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 ACEP12821 1306 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 SPATA31A3Q5VYP0 1347 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 PIK3C2AO00443 1686 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 Q3C1V9 767 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 CDCA8Q53HL2 280 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 DESI1Q6ICB0 168 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 UCN2Q96RP3 112 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 USTQ9Y2C2 406 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 NRKQ7Z2Y5 1582 aa6.85□□□□□ -1.31
VPS41-205ENST00000414632 EVC2Q86UK5 1308 aa6.84□□□□□ -1.31
VPS41-205ENST00000414632 ST20-MTHFSA0A0A6YYL1 179 aa6.84□□□□□ -1.31
VPS41-205ENST00000414632 BHMG1C9JSJ3 638 aaPredicted RBP6.84□□□□□ -1.31
VPS41-205ENST00000414632 ACTN4O43707 911 aaKnown RBP6.84□□□□□ -1.31
VPS41-205ENST00000414632 POTEAQ6S8J7 498 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms