RNA–Protein interactions for RNA: ENST00000414331.5

PTPA-209, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-209ENST00000414331 USPL1Q5W0Q7 1092 aa21.02■□□□□ 0.96
PTPA-209ENST00000414331 BCS1LQ9Y276 419 aa21.02■□□□□ 0.96
PTPA-209ENST00000414331 ARFGEF1Q9Y6D6 1849 aa21.01■□□□□ 0.95
PTPA-209ENST00000414331 CEMIPQ8WUJ3 1361 aa21.01■□□□□ 0.95
PTPA-209ENST00000414331 HEG1Q9ULI3 1381 aa21.01■□□□□ 0.95
PTPA-209ENST00000414331 C1QTNF8P60827 252 aa21.01■□□□□ 0.95
PTPA-209ENST00000414331 DDR1Q08345 913 aa21.01■□□□□ 0.95
PTPA-209ENST00000414331 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
PTPA-209ENST00000414331 PHACTR3Q96KR7 559 aa21.01■□□□□ 0.95
PTPA-209ENST00000414331 AFDNP55196 1824 aaKnown RBP21■□□□□ 0.95
PTPA-209ENST00000414331 DPEP1P16444 411 aa21■□□□□ 0.95
PTPA-209ENST00000414331 NARFQ9UHQ1 456 aa21■□□□□ 0.95
PTPA-209ENST00000414331 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
PTPA-209ENST00000414331 CANXP27824 592 aaKnown RBP20.99■□□□□ 0.95
PTPA-209ENST00000414331 RTF1Q92541 710 aaKnown RBP20.99■□□□□ 0.95
PTPA-209ENST00000414331 ZNF496Q96IT1 587 aaPredicted RBP20.99■□□□□ 0.95
PTPA-209ENST00000414331 TEX13AQ9BXU3 409 aaPredicted RBP20.99■□□□□ 0.95
PTPA-209ENST00000414331 POLRMTO00411 1230 aaKnown RBP20.98■□□□□ 0.95
PTPA-209ENST00000414331 FCHSD2O94868 740 aa20.98■□□□□ 0.95
PTPA-209ENST00000414331 FMNL2Q96PY5 1086 aa20.98■□□□□ 0.95
PTPA-209ENST00000414331 A0A087WZG4 1122 aa20.97■□□□□ 0.95
PTPA-209ENST00000414331 BTBD11A6QL63 1104 aa20.97■□□□□ 0.95
PTPA-209ENST00000414331 GPBP1L1Q9HC44 474 aaPredicted RBP20.97■□□□□ 0.95
PTPA-209ENST00000414331 NRXN2Q9P2S2 1712 aa20.97■□□□□ 0.95
PTPA-209ENST00000414331 NEFMP07197 916 aa20.96■□□□□ 0.95
PTPA-209ENST00000414331 TM4SF1P30408 202 aa20.96■□□□□ 0.95
PTPA-209ENST00000414331 SENP3-EIF4A1A0A087X0R7 540 aa20.95■□□□□ 0.94
PTPA-209ENST00000414331 ZNF526Q8TF50 670 aaPredicted RBP20.95■□□□□ 0.94
PTPA-209ENST00000414331 PIM2Q9P1W9 311 aa20.95■□□□□ 0.94
PTPA-209ENST00000414331 ZNF330Q9Y3S2 320 aaPredicted RBP20.95■□□□□ 0.94
PTPA-209ENST00000414331 NFIXQ14938 502 aa20.94■□□□□ 0.94
PTPA-209ENST00000414331 NPM2Q86SE8 214 aaKnown RBP20.94■□□□□ 0.94
PTPA-209ENST00000414331 DLEC1Q9Y238 1755 aa20.94■□□□□ 0.94
PTPA-209ENST00000414331 EIF5P55010 431 aaKnown RBP20.93■□□□□ 0.94
PTPA-209ENST00000414331 ARHGAP27Q6ZUM4 889 aa20.93■□□□□ 0.94
PTPA-209ENST00000414331 DLG5Q8TDM6 1919 aa20.93■□□□□ 0.94
PTPA-209ENST00000414331 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
PTPA-209ENST00000414331 DALRD3Q5D0E6 543 aaKnown RBP20.92■□□□□ 0.94
PTPA-209ENST00000414331 MCM10Q7L590 875 aa20.92■□□□□ 0.94
PTPA-209ENST00000414331 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
PTPA-209ENST00000414331 KCNA3P22001 575 aa20.91■□□□□ 0.94
PTPA-209ENST00000414331 CHRNA5P30532 468 aa20.91■□□□□ 0.94
PTPA-209ENST00000414331 IL6STP40189 918 aaPredicted RBP20.91■□□□□ 0.94
PTPA-209ENST00000414331 BCL2L12Q9HB09 334 aa20.91■□□□□ 0.94
PTPA-209ENST00000414331 SERPINB2P05120 415 aa20.9■□□□□ 0.94
PTPA-209ENST00000414331 LAMB4A4D0S4 1761 aa20.9■□□□□ 0.94
PTPA-209ENST00000414331 KCNQ3O43525 872 aa20.89■□□□□ 0.93
PTPA-209ENST00000414331 BICDL1Q6ZP65 573 aa20.89■□□□□ 0.93
PTPA-209ENST00000414331 DCTN1Q14203 1278 aa20.88■□□□□ 0.93
PTPA-209ENST00000414331 A1BGP04217 495 aa20.87■□□□□ 0.93
PTPA-209ENST00000414331 TBC1D2BQ9UPU7 963 aa20.87■□□□□ 0.93
PTPA-209ENST00000414331 CARMIL3Q8ND23 1372 aa20.86■□□□□ 0.93
PTPA-209ENST00000414331 MAPK8IP3Q9UPT6 1336 aa20.86■□□□□ 0.93
PTPA-209ENST00000414331 SNRPA1P09661 255 aaKnown RBP20.86■□□□□ 0.93
PTPA-209ENST00000414331 KDM3BQ7LBC6 1761 aa20.86■□□□□ 0.93
PTPA-209ENST00000414331 ANKRD31Q8N7Z5 1873 aa20.86■□□□□ 0.93
PTPA-209ENST00000414331 TBC1D9BQ66K14 1250 aa20.85■□□□□ 0.93
PTPA-209ENST00000414331 PNNQ9H307 717 aaKnown RBP20.85■□□□□ 0.93
PTPA-209ENST00000414331 DZIP3Q86Y13 1208 aaKnown RBP20.84■□□□□ 0.93
PTPA-209ENST00000414331 NPHP1O15259 732 aa20.83■□□□□ 0.93
PTPA-209ENST00000414331 TAF7Q15545 349 aaPredicted RBP20.83■□□□□ 0.93
PTPA-209ENST00000414331 C9orf131Q5VYM1 1079 aa20.83■□□□□ 0.93
PTPA-209ENST00000414331 C2CD5Q86YS7 1000 aa20.83■□□□□ 0.93
PTPA-209ENST00000414331 USP16Q9Y5T5 823 aa20.83■□□□□ 0.93
PTPA-209ENST00000414331 COL11A2P13942 1736 aaPredicted RBP20.83■□□□□ 0.92
PTPA-209ENST00000414331 SBF1O95248 1867 aa20.83■□□□□ 0.92
PTPA-209ENST00000414331 PRAMEF22A3QJZ6 481 aa20.82■□□□□ 0.92
PTPA-209ENST00000414331 H0YIN7 160 aa20.82■□□□□ 0.92
PTPA-209ENST00000414331 CAMTA2O94983 1202 aa20.82■□□□□ 0.92
PTPA-209ENST00000414331 RALBP1Q15311 655 aa20.82■□□□□ 0.92
PTPA-209ENST00000414331 NFE2L2Q16236 605 aa20.82■□□□□ 0.92
PTPA-209ENST00000414331 PNISRQ8TF01 805 aaKnown RBP20.82■□□□□ 0.92
PTPA-209ENST00000414331 PIP4K2AP48426 406 aaPredicted RBP20.81■□□□□ 0.92
PTPA-209ENST00000414331 PLEKHF1Q96S99 279 aa20.81■□□□□ 0.92
PTPA-209ENST00000414331 SETDB2Q96T68 719 aa20.81■□□□□ 0.92
PTPA-209ENST00000414331 RNF181Q9P0P0 153 aa20.81■□□□□ 0.92
PTPA-209ENST00000414331 PDE6BP35913 854 aa20.8■□□□□ 0.92
PTPA-209ENST00000414331 TTLL6Q8N841 843 aa20.8■□□□□ 0.92
PTPA-209ENST00000414331 CNBD1Q8NA66 436 aa20.8■□□□□ 0.92
PTPA-209ENST00000414331 PDZRN3Q9UPQ7 1066 aa20.8■□□□□ 0.92
PTPA-209ENST00000414331 ZNF652Q9Y2D9 606 aa20.8■□□□□ 0.92
PTPA-209ENST00000414331 ST5P78524 1137 aa20.79■□□□□ 0.92
PTPA-209ENST00000414331 PRR5LQ6MZQ0 368 aa20.79■□□□□ 0.92
PTPA-209ENST00000414331 BRIP1Q9BX63 1249 aa20.79■□□□□ 0.92
PTPA-209ENST00000414331 CACNA1SQ13698 1873 aa20.79■□□□□ 0.92
PTPA-209ENST00000414331 KIF3CO14782 793 aa20.78■□□□□ 0.92
PTPA-209ENST00000414331 TIAM2Q8IVF5 1701 aa20.78■□□□□ 0.92
PTPA-209ENST00000414331 TNRC6CQ9HCJ0 1690 aaKnown RBP20.77■□□□□ 0.92
PTPA-209ENST00000414331 MIS18AQ9NYP9 233 aa20.77■□□□□ 0.92
PTPA-209ENST00000414331 RASSF7Q02833 373 aa20.76■□□□□ 0.91
PTPA-209ENST00000414331 DDX10Q13206 875 aaKnown RBP20.76■□□□□ 0.91
PTPA-209ENST00000414331 CLEC4GQ6UXB4 293 aa20.76■□□□□ 0.91
PTPA-209ENST00000414331 ZNF622Q969S3 477 aaKnown RBP eCLIP20.76■□□□□ 0.91
PTPA-209ENST00000414331 ARFGEF2Q9Y6D5 1785 aa20.76■□□□□ 0.91
PTPA-209ENST00000414331 KDM2BQ8NHM5 1336 aa20.76■□□□□ 0.91
PTPA-209ENST00000414331 MYBBP1AQ9BQG0 1328 aaKnown RBP20.76■□□□□ 0.91
PTPA-209ENST00000414331 CCDC88AQ3V6T2 1871 aa20.75■□□□□ 0.91
PTPA-209ENST00000414331 CCDC24Q8N4L8 307 aa20.75■□□□□ 0.91
PTPA-209ENST00000414331 THUMPD2Q9BTF0 503 aaKnown RBP20.75■□□□□ 0.91
PTPA-209ENST00000414331 NBPF26B4DH59 902 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms