RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 DBF4Q9UBU7 674 aaPredicted RBP10.47□□□□□ -0.73
HDAC9-207ENST00000413509 ATP10DQ9P241 1426 aa10.47□□□□□ -0.73
HDAC9-207ENST00000413509 PRAMEF22A3QJZ6 481 aa10.46□□□□□ -0.73
HDAC9-207ENST00000413509 HDAC1Q13547 482 aaPredicted RBP10.46□□□□□ -0.73
HDAC9-207ENST00000413509 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
HDAC9-207ENST00000413509 DDX21Q9NR30 783 aaKnown RBP eCLIP10.46□□□□□ -0.73
HDAC9-207ENST00000413509 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
HDAC9-207ENST00000413509 ZNF831Q5JPB2 1677 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 ADCY9O60503 1353 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 IGHDP01880 384 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 CCT4P50991 539 aaKnown RBP10.45□□□□□ -0.74
HDAC9-207ENST00000413509 DDB1Q16531 1140 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 PROSER3Q2NL68 480 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 MARCH10Q8NA82 808 aaPredicted RBP10.45□□□□□ -0.74
HDAC9-207ENST00000413509 PIGBQ92521 554 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 HYPKQ9NX55 129 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 TMOD3Q9NYL9 352 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 USP21Q9UK80 565 aa10.45□□□□□ -0.74
HDAC9-207ENST00000413509 TJP1Q07157 1748 aa10.44□□□□□ -0.74
HDAC9-207ENST00000413509 ONECUT3O60422 494 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-207ENST00000413509 EIF2S2P20042 333 aaKnown RBP10.44□□□□□ -0.74
HDAC9-207ENST00000413509 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
HDAC9-207ENST00000413509 NECTIN2Q92692 538 aa10.44□□□□□ -0.74
HDAC9-207ENST00000413509 PHAXQ9H814 394 aaKnown RBP10.44□□□□□ -0.74
HDAC9-207ENST00000413509 RREB1Q92766 1687 aa10.44□□□□□ -0.74
HDAC9-207ENST00000413509 AFF2P51816 1311 aa10.43□□□□□ -0.74
HDAC9-207ENST00000413509 F6X3S4 739 aa10.43□□□□□ -0.74
HDAC9-207ENST00000413509 FKBP5Q13451 457 aaPredicted RBP10.43□□□□□ -0.74
HDAC9-207ENST00000413509 ATG3Q9NT62 314 aa10.43□□□□□ -0.74
HDAC9-207ENST00000413509 NUP188Q5SRE5 1749 aa10.43□□□□□ -0.74
HDAC9-207ENST00000413509 NHSQ6T4R5 1651 aa10.42□□□□□ -0.74
HDAC9-207ENST00000413509 RWDD1Q9H446 243 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-207ENST00000413509 USP16Q9Y5T5 823 aa10.42□□□□□ -0.74
HDAC9-207ENST00000413509 ARFGEF2Q9Y6D5 1785 aa10.42□□□□□ -0.74
HDAC9-207ENST00000413509 ANXA1P04083 346 aa10.41□□□□□ -0.74
HDAC9-207ENST00000413509 FAM98CQ17RN3 349 aaKnown RBP10.41□□□□□ -0.74
HDAC9-207ENST00000413509 BEND3Q5T5X7 828 aa10.41□□□□□ -0.74
HDAC9-207ENST00000413509 KSR2Q6VAB6 950 aa10.41□□□□□ -0.74
HDAC9-207ENST00000413509 SIRT2Q8IXJ6 389 aa10.41□□□□□ -0.74
HDAC9-207ENST00000413509 SMC5Q8IY18 1101 aa10.41□□□□□ -0.74
HDAC9-207ENST00000413509 DNAAF4Q8WXU2 420 aa10.41□□□□□ -0.74
HDAC9-207ENST00000413509 GJD4Q96KN9 370 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-207ENST00000413509 ASAP1Q9ULH1 1129 aa10.41□□□□□ -0.74
HDAC9-207ENST00000413509 PI4KAP2A4QPH2 592 aa10.4□□□□□ -0.74
HDAC9-207ENST00000413509 NBPF26B4DH59 902 aa10.4□□□□□ -0.74
HDAC9-207ENST00000413509 NBPF14Q5TI25 921 aa10.4□□□□□ -0.74
HDAC9-207ENST00000413509 MEX3CQ5U5Q3 659 aaKnown RBP10.4□□□□□ -0.74
HDAC9-207ENST00000413509 NBPF10Q6P3W6 841 aaKnown RBP10.4□□□□□ -0.74
HDAC9-207ENST00000413509 NBPF15Q8N660 670 aa10.4□□□□□ -0.74
HDAC9-207ENST00000413509 PI4KAP1Q8N8J0 262 aa10.4□□□□□ -0.74
HDAC9-207ENST00000413509 SLC4A9Q96Q91 983 aa10.4□□□□□ -0.74
HDAC9-207ENST00000413509 MEIS3Q99687 375 aa10.4□□□□□ -0.74
HDAC9-207ENST00000413509 TEX13AQ9BXU3 409 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-207ENST00000413509 TRPC5Q9UL62 973 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-207ENST00000413509 CCDC9Q9Y3X0 531 aaKnown RBP10.4□□□□□ -0.74
HDAC9-207ENST00000413509 SBF2Q86WG5 1849 aa10.4□□□□□ -0.75
HDAC9-207ENST00000413509 COL5A3P25940 1745 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-207ENST00000413509 ALDH1L1O75891 902 aa10.39□□□□□ -0.75
HDAC9-207ENST00000413509 PRIM1P49642 420 aaKnown RBP10.39□□□□□ -0.75
HDAC9-207ENST00000413509 ANKRD44Q8N8A2 993 aa10.39□□□□□ -0.75
HDAC9-207ENST00000413509 USP44Q9H0E7 712 aa10.39□□□□□ -0.75
HDAC9-207ENST00000413509 UTYO14607 1347 aa10.38□□□□□ -0.75
HDAC9-207ENST00000413509 DDX58O95786 925 aaKnown RBP10.38□□□□□ -0.75
HDAC9-207ENST00000413509 GNAI3P08754 354 aa10.38□□□□□ -0.75
HDAC9-207ENST00000413509 CEP85Q6P2H3 762 aa10.38□□□□□ -0.75
HDAC9-207ENST00000413509 SLC4A10Q6U841 1118 aa10.38□□□□□ -0.75
HDAC9-207ENST00000413509 RPAP2Q8IXW5 612 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-207ENST00000413509 XAGE3Q8WTP9 111 aa10.38□□□□□ -0.75
HDAC9-207ENST00000413509 SRCIN1Q9C0H9 1055 aa10.38□□□□□ -0.75
HDAC9-207ENST00000413509 MAP3K2Q9Y2U5 619 aa10.38□□□□□ -0.75
HDAC9-207ENST00000413509 KAT6BQ8WYB5 2073 aa10.38□□□□□ -0.75
HDAC9-207ENST00000413509 BTAF1O14981 1849 aa10.37□□□□□ -0.75
HDAC9-207ENST00000413509 PTCD1O75127 700 aaKnown RBP10.37□□□□□ -0.75
HDAC9-207ENST00000413509 COPS6Q7L5N1 327 aa10.37□□□□□ -0.75
HDAC9-207ENST00000413509 LINS1Q8NG48 757 aa10.37□□□□□ -0.75
HDAC9-207ENST00000413509 C1orf115Q9H7X2 142 aa10.37□□□□□ -0.75
HDAC9-207ENST00000413509 COL15A1P39059 1388 aa10.37□□□□□ -0.75
HDAC9-207ENST00000413509 GNAI2P04899 355 aa10.36□□□□□ -0.75
HDAC9-207ENST00000413509 CYP19A1P11511 503 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-207ENST00000413509 DNAJC10Q8IXB1 793 aa10.36□□□□□ -0.75
HDAC9-207ENST00000413509 PLBD2Q8NHP8 589 aa10.36□□□□□ -0.75
HDAC9-207ENST00000413509 GCC1Q96CN9 775 aa10.36□□□□□ -0.75
HDAC9-207ENST00000413509 METTL22Q9BUU2 404 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-207ENST00000413509 LY75O60449 1722 aa10.36□□□□□ -0.75
HDAC9-207ENST00000413509 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
HDAC9-207ENST00000413509 BRWD3Q6RI45 1802 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 STARD3NLO95772 234 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 A1BGP04217 495 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 IGKV5-2P06315 115 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 MYL6BP14649 208 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 NUCB1Q02818 461 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 ANKRD13DQ6ZTN6 518 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 SMARCC1Q92922 1105 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-207ENST00000413509 DCTPP1Q9H773 170 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 TSHZ2Q9NRE2 1034 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 PDZRN3Q9UPQ7 1066 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 EP400Q96L91 3159 aa10.35□□□□□ -0.75
HDAC9-207ENST00000413509 MYH14Q7Z406 1995 aaKnown RBP10.35□□□□□ -0.75
HDAC9-207ENST00000413509 PALLDQ8WX93 1383 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms