RNA–Protein interactions for RNA: ENST00000412738.5

RBM39-207, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-207ENST00000412738 ZNF496Q96IT1 587 aaPredicted RBP18.3■□□□□ 0.52
RBM39-207ENST00000412738 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
RBM39-207ENST00000412738 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
RBM39-207ENST00000412738 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
RBM39-207ENST00000412738 NARFQ9UHQ1 456 aa18.29■□□□□ 0.52
RBM39-207ENST00000412738 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
RBM39-207ENST00000412738 RALBP1Q15311 655 aa18.28■□□□□ 0.52
RBM39-207ENST00000412738 MCM10Q7L590 875 aa18.28■□□□□ 0.52
RBM39-207ENST00000412738 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
RBM39-207ENST00000412738 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.52
RBM39-207ENST00000412738 A0A087WZG4 1122 aa18.27■□□□□ 0.52
RBM39-207ENST00000412738 A0A0G2JLW4 131 aa18.27■□□□□ 0.52
RBM39-207ENST00000412738 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
RBM39-207ENST00000412738 ZNF330Q9Y3S2 320 aaPredicted RBP18.27■□□□□ 0.52
RBM39-207ENST00000412738 PXDNLA1KZ92 1463 aa18.26■□□□□ 0.51
RBM39-207ENST00000412738 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
RBM39-207ENST00000412738 BCS1LQ9Y276 419 aa18.26■□□□□ 0.51
RBM39-207ENST00000412738 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
RBM39-207ENST00000412738 DPEP1P16444 411 aa18.25■□□□□ 0.51
RBM39-207ENST00000412738 TM4SF1P30408 202 aa18.25■□□□□ 0.51
RBM39-207ENST00000412738 DDR1Q08345 913 aa18.25■□□□□ 0.51
RBM39-207ENST00000412738 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
RBM39-207ENST00000412738 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
RBM39-207ENST00000412738 POLRMTO00411 1230 aaKnown RBP18.24■□□□□ 0.51
RBM39-207ENST00000412738 KCNQ3O43525 872 aa18.24■□□□□ 0.51
RBM39-207ENST00000412738 EIF5P55010 431 aaKnown RBP18.24■□□□□ 0.51
RBM39-207ENST00000412738 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
RBM39-207ENST00000412738 NFIXQ14938 502 aa18.22■□□□□ 0.51
RBM39-207ENST00000412738 TAF7Q15545 349 aaPredicted RBP18.22■□□□□ 0.51
RBM39-207ENST00000412738 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
RBM39-207ENST00000412738 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
RBM39-207ENST00000412738 A1BGP04217 495 aa18.21■□□□□ 0.51
RBM39-207ENST00000412738 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
RBM39-207ENST00000412738 BICDL1Q6ZP65 573 aa18.21■□□□□ 0.51
RBM39-207ENST00000412738 SERPINB2P05120 415 aa18.2■□□□□ 0.5
RBM39-207ENST00000412738 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
RBM39-207ENST00000412738 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
RBM39-207ENST00000412738 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
RBM39-207ENST00000412738 NFE2L2Q16236 605 aa18.19■□□□□ 0.5
RBM39-207ENST00000412738 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
RBM39-207ENST00000412738 ARHGAP27Q6ZUM4 889 aa18.19■□□□□ 0.5
RBM39-207ENST00000412738 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
RBM39-207ENST00000412738 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
RBM39-207ENST00000412738 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
RBM39-207ENST00000412738 ATP10DQ9P241 1426 aa18.18■□□□□ 0.5
RBM39-207ENST00000412738 KCNA3P22001 575 aa18.18■□□□□ 0.5
RBM39-207ENST00000412738 GPBP1L1Q9HC44 474 aaPredicted RBP18.18■□□□□ 0.5
RBM39-207ENST00000412738 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
RBM39-207ENST00000412738 NPHP1O15259 732 aa18.17■□□□□ 0.5
RBM39-207ENST00000412738 CHRNA5P30532 468 aa18.17■□□□□ 0.5
RBM39-207ENST00000412738 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
RBM39-207ENST00000412738 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
RBM39-207ENST00000412738 C1QTNF8P60827 252 aa18.16■□□□□ 0.5
RBM39-207ENST00000412738 TBC1D9BQ66K14 1250 aa18.16■□□□□ 0.5
RBM39-207ENST00000412738 DZIP3Q86Y13 1208 aaKnown RBP18.16■□□□□ 0.5
RBM39-207ENST00000412738 ZNF526Q8TF50 670 aaPredicted RBP18.16■□□□□ 0.5
RBM39-207ENST00000412738 DLG5Q8TDM6 1919 aa18.15■□□□□ 0.5
RBM39-207ENST00000412738 PIP4K2AP48426 406 aaPredicted RBP18.15■□□□□ 0.5
RBM39-207ENST00000412738 SETDB2Q96T68 719 aa18.15■□□□□ 0.5
RBM39-207ENST00000412738 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.5
RBM39-207ENST00000412738 BRCA1P38398 1863 aaKnown RBP18.14■□□□□ 0.49
RBM39-207ENST00000412738 CARMIL3Q8ND23 1372 aa18.14■□□□□ 0.49
RBM39-207ENST00000412738 SCN7AQ01118 1682 aa18.13■□□□□ 0.49
RBM39-207ENST00000412738 H0YIN7 160 aa18.13■□□□□ 0.49
RBM39-207ENST00000412738 CAMTA2O94983 1202 aa18.13■□□□□ 0.49
RBM39-207ENST00000412738 RIPK4P57078 832 aa18.13■□□□□ 0.49
RBM39-207ENST00000412738 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
RBM39-207ENST00000412738 THUMPD2Q9BTF0 503 aaKnown RBP18.13■□□□□ 0.49
RBM39-207ENST00000412738 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
RBM39-207ENST00000412738 ADCY9O60503 1353 aa18.13■□□□□ 0.49
RBM39-207ENST00000412738 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
RBM39-207ENST00000412738 LMOD3Q0VAK6 560 aa18.12■□□□□ 0.49
RBM39-207ENST00000412738 C2CD5Q86YS7 1000 aa18.12■□□□□ 0.49
RBM39-207ENST00000412738 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
RBM39-207ENST00000412738 PDE6BP35913 854 aa18.11■□□□□ 0.49
RBM39-207ENST00000412738 PDZRN3Q9UPQ7 1066 aa18.11■□□□□ 0.49
RBM39-207ENST00000412738 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
RBM39-207ENST00000412738 ST5P78524 1137 aa18.1■□□□□ 0.49
RBM39-207ENST00000412738 CLEC4GQ6UXB4 293 aa18.1■□□□□ 0.49
RBM39-207ENST00000412738 TTLL6Q8N841 843 aa18.1■□□□□ 0.49
RBM39-207ENST00000412738 CNBD1Q8NA66 436 aa18.1■□□□□ 0.49
RBM39-207ENST00000412738 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
RBM39-207ENST00000412738 EIF4A1P60842 406 aaKnown RBP18.09■□□□□ 0.49
RBM39-207ENST00000412738 PRR5LQ6MZQ0 368 aa18.09■□□□□ 0.49
RBM39-207ENST00000412738 BRIP1Q9BX63 1249 aa18.09■□□□□ 0.49
RBM39-207ENST00000412738 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
RBM39-207ENST00000412738 NBPF26B4DH59 902 aa18.08■□□□□ 0.48
RBM39-207ENST00000412738 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
RBM39-207ENST00000412738 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
RBM39-207ENST00000412738 C9orf131Q5VYM1 1079 aa18.08■□□□□ 0.48
RBM39-207ENST00000412738 NBPF10Q6P3W6 841 aaKnown RBP18.08■□□□□ 0.48
RBM39-207ENST00000412738 CCDC146Q8IYE0 955 aa18.08■□□□□ 0.48
RBM39-207ENST00000412738 NBPF15Q8N660 670 aa18.08■□□□□ 0.48
RBM39-207ENST00000412738 ZNF622Q969S3 477 aaKnown RBP eCLIP18.08■□□□□ 0.482e-9■□□□□ 11.1
RBM39-207ENST00000412738 KDM3BQ7LBC6 1761 aa18.08■□□□□ 0.48
RBM39-207ENST00000412738 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
RBM39-207ENST00000412738 BCORQ6W2J9 1755 aa18.07■□□□□ 0.48
RBM39-207ENST00000412738 NBPF5PQ86XG9 351 aaPredicted RBP18.07■□□□□ 0.48
RBM39-207ENST00000412738 CCDC24Q8N4L8 307 aa18.07■□□□□ 0.48
RBM39-207ENST00000412738 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms