RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 FAM200BP0CF97 657 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 CCNHP51946 323 aaPredicted RBP6.19□□□□□ -1.42
HERC4-205ENST00000412272 OGFOD1Q8N543 542 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 DIAPH3Q9NSV4 1193 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 SUGT1Q9Y2Z0 365 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 PLIN1O60240 522 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 IGHDP01880 384 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 TSNAXIP1Q2TAA8 658 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 CCDC178Q5BJE1 867 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 IQUBQ8NA54 791 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 PLEKHG4BQ96PX9 1271 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 PZPP20742 1482 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 RBM12BQ8IXT5 1001 aaKnown RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 EFCAB13Q8IY85 973 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 ELOA2Q8IYF1 753 aaPredicted RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 CDCA7LQ96GN5 454 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 CWC15Q9P013 229 aaKnown RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 CFAP74Q9C0B2 1584 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 COL17A1Q9UMD9 1497 aaPredicted RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 ICA1Q05084 483 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 RABEP1Q15276 862 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 KMT5BQ4FZB7 885 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 NOM1Q5C9Z4 860 aaKnown RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 CCDC186Q7Z3E2 898 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 MPHOSPH9Q99550 1183 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 PPME1Q9Y570 386 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 PLB1Q6P1J6 1458 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 IPO5O00410 1097 aaKnown RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 ZSCAN9O15535 394 aaPredicted RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 TPM1P09493 284 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 PDCD2Q16342 344 aaPredicted RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 CDC37L1Q7L3B6 337 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 TBC1D5Q92609 795 aa6.18□□□□□ -1.42
HERC4-205ENST00000412272 PRDM15P57071 1507 aaPredicted RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 EIF4G3O43432 1585 aaKnown RBP6.18□□□□□ -1.42
HERC4-205ENST00000412272 CDKL5O76039 1030 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 PYGLP06737 847 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 FBXO18Q8NFZ0 1043 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 STAG1Q8WVM7 1258 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 ATAD2BQ9ULI0 1458 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 RTN2O75298 545 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 NAT2P11245 290 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 HHATQ5VTY9 493 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 C16orf87Q6PH81 154 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 TEX11Q8IYF3 940 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 C17orf53Q8N3J3 647 aaPredicted RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 PMFBP1Q8TBY8 1022 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 MICAL1Q8TDZ2 1067 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 SNRNP27Q8WVK2 155 aaKnown RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 IRF2BPLQ9H1B7 796 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 SLC27A2O14975 620 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 U2SURPO15042 1029 aaKnown RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 CYP2E1P05181 493 aaPredicted RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 FMNL3Q8IVF7 1028 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 HSCBQ8IWL3 235 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 RPUSD2Q8IZ73 545 aaKnown RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 TDRD7Q8NHU6 1098 aaKnown RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 ZSCAN16Q9H4T2 348 aaPredicted RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 LRRFIP2Q9Y608 721 aaKnown RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 SGSM2O43147 1006 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 MARCH6O60337 910 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 CCDC30Q5VVM6 783 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 LEKR1Q6ZMV7 388 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 PPM1EQ8WY54 764 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 SRRTQ9BXP5 876 aaKnown RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 RBM27Q9P2N5 1060 aaKnown RBP6.17□□□□□ -1.42
HERC4-205ENST00000412272 TRAK1Q9UPV9 953 aa6.17□□□□□ -1.42
HERC4-205ENST00000412272 RNF17Q9BXT8 1623 aaKnown RBP6.16□□□□□ -1.42
HERC4-205ENST00000412272 PER1O15534 1290 aaPredicted RBP6.16□□□□□ -1.42
HERC4-205ENST00000412272 SPRYD3Q8NCJ5 442 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 ZNF397Q8NF99 534 aaPredicted RBP6.16□□□□□ -1.42
HERC4-205ENST00000412272 KCNN1Q92952 543 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 ARHGEF10LQ9HCE6 1279 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 PTPRCP08575 1304 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 PIK3C2GO75747 1445 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 EXOC5O00471 708 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 SNUPNO95149 360 aaKnown RBP6.16□□□□□ -1.42
HERC4-205ENST00000412272 KIF4AO95239 1232 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 PYGBP11216 843 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 SLFN5Q08AF3 891 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 NAA30Q147X3 362 aaPredicted RBP6.16□□□□□ -1.42
HERC4-205ENST00000412272 ZSCAN23Q3MJ62 389 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 BAG1Q99933 345 aaPredicted RBP6.16□□□□□ -1.42
HERC4-205ENST00000412272 ARID3CA6NKF2 412 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 FMNL1O95466 1100 aaPredicted RBP6.16□□□□□ -1.42
HERC4-205ENST00000412272 SLC7A5Q01650 507 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 SNX1Q13596 522 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 LRSAM1Q6UWE0 723 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 LRRC31Q6UY01 552 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 GOLGA5Q8TBA6 731 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 C17orf50Q8WW18 174 aa6.16□□□□□ -1.42
HERC4-205ENST00000412272 PTPRGP23470 1445 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 ARL10Q8N8L6 244 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 CRACR2AQ9BSW2 395 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 RWDD1Q9H446 243 aaPredicted RBP6.15□□□□□ -1.42
HERC4-205ENST00000412272 ADGRL2O95490 1459 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 GPRASP1Q5JY77 1395 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 EIF3CLB5ME19 914 aaKnown RBP6.15□□□□□ -1.42
HERC4-205ENST00000412272 GCFC2P16383 781 aaKnown RBP6.15□□□□□ -1.42
HERC4-205ENST00000412272 TRPC1P48995 793 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms