RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 RIC3Q7Z5B4 369 aa11.65□□□□□ -0.54
CCDC196-203ENST00000411796 SLC12A5Q9H2X9 1139 aa11.65□□□□□ -0.54
CCDC196-203ENST00000411796 PANK3Q9H999 370 aa11.65□□□□□ -0.54
CCDC196-203ENST00000411796 KNSTRNQ9Y448 316 aa11.65□□□□□ -0.54
CCDC196-203ENST00000411796 NSD2O96028 1365 aa11.65□□□□□ -0.55
CCDC196-203ENST00000411796 C1orf167Q5SNV9 1468 aa11.64□□□□□ -0.55
CCDC196-203ENST00000411796 NPHP3Q7Z494 1330 aa11.64□□□□□ -0.55
CCDC196-203ENST00000411796 MST1RQ04912 1400 aa11.64□□□□□ -0.55
CCDC196-203ENST00000411796 SPTLC1O15269 473 aa11.64□□□□□ -0.55
CCDC196-203ENST00000411796 FDX1P10109 184 aa11.64□□□□□ -0.55
CCDC196-203ENST00000411796 RSBN1LQ6PCB5 846 aaPredicted RBP11.64□□□□□ -0.55
CCDC196-203ENST00000411796 ACEP12821 1306 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 CGNL1Q0VF96 1302 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 PRR36Q9H6K5 1346 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 KCNC4Q03721 635 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 RALBP1Q15311 655 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 SKIV2LQ15477 1246 aaKnown RBP11.63□□□□□ -0.55
CCDC196-203ENST00000411796 ESCO1Q5FWF5 840 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
CCDC196-203ENST00000411796 TMC1Q8TDI8 760 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 LIMD1Q9UGP4 676 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 PCDHB15Q9Y5E8 787 aa11.63□□□□□ -0.55
CCDC196-203ENST00000411796 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
CCDC196-203ENST00000411796 SH3D19Q5HYK7 790 aa11.62□□□□□ -0.55
CCDC196-203ENST00000411796 NKX2-3Q8TAU0 364 aa11.62□□□□□ -0.55
CCDC196-203ENST00000411796 SBNO1A3KN83 1393 aa11.62□□□□□ -0.55
CCDC196-203ENST00000411796 XIRP1Q702N8 1843 aaKnown RBP11.62□□□□□ -0.55
CCDC196-203ENST00000411796 EDC4Q6P2E9 1401 aaKnown RBP11.61□□□□□ -0.55
CCDC196-203ENST00000411796 SSH2Q76I76 1423 aa11.61□□□□□ -0.55
CCDC196-203ENST00000411796 GJA5P36382 358 aa11.61□□□□□ -0.55
CCDC196-203ENST00000411796 DDX10Q13206 875 aaKnown RBP11.61□□□□□ -0.55
CCDC196-203ENST00000411796 BRICD5Q6PL45 260 aa11.61□□□□□ -0.55
CCDC196-203ENST00000411796 PROCA1Q8NCQ7 364 aaPredicted RBP11.61□□□□□ -0.55
CCDC196-203ENST00000411796 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
CCDC196-203ENST00000411796 USP31Q70CQ4 1352 aa11.6□□□□□ -0.55
CCDC196-203ENST00000411796 RNF19BQ6ZMZ0 732 aa11.6□□□□□ -0.55
CCDC196-203ENST00000411796 SYMPKQ92797 1274 aaKnown RBP11.6□□□□□ -0.55
CCDC196-203ENST00000411796 FMN2Q9NZ56 1722 aa11.6□□□□□ -0.55
CCDC196-203ENST00000411796 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
CCDC196-203ENST00000411796 TLL1O43897 1013 aa11.59□□□□□ -0.55
CCDC196-203ENST00000411796 CLK2P49760 499 aaKnown RBP11.59□□□□□ -0.55
CCDC196-203ENST00000411796 BRINP3Q76B58 766 aa11.59□□□□□ -0.55
CCDC196-203ENST00000411796 LRRC59Q96AG4 307 aaKnown RBP11.59□□□□□ -0.55
CCDC196-203ENST00000411796 CARD14Q9BXL6 1004 aa11.59□□□□□ -0.55
CCDC196-203ENST00000411796 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
CCDC196-203ENST00000411796 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
CCDC196-203ENST00000411796 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
CCDC196-203ENST00000411796 CSPP1Q1MSJ5 1256 aa11.58□□□□□ -0.56
CCDC196-203ENST00000411796 KRT28Q7Z3Y7 464 aa11.58□□□□□ -0.56
CCDC196-203ENST00000411796 ORAI2Q96SN7 254 aa11.58□□□□□ -0.56
CCDC196-203ENST00000411796 TTC21BQ7Z4L5 1316 aa11.58□□□□□ -0.56
CCDC196-203ENST00000411796 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 FYB1O15117 783 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
CCDC196-203ENST00000411796 Q3C1V9 767 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 DIEXFQ68CQ4 756 aaKnown RBP11.57□□□□□ -0.56
CCDC196-203ENST00000411796 ZNF772Q68DY9 489 aaPredicted RBP11.57□□□□□ -0.56
CCDC196-203ENST00000411796 NLRP13Q86W25 1043 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 KCNH5Q8NCM2 988 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 SPSB2Q99619 263 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 USP6P35125 1406 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
CCDC196-203ENST00000411796 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
CCDC196-203ENST00000411796 KIF24Q5T7B8 1368 aa11.56□□□□□ -0.56
CCDC196-203ENST00000411796 ANP32CO43423 234 aa11.56□□□□□ -0.56
CCDC196-203ENST00000411796 FOXO3O43524 673 aa11.56□□□□□ -0.56
CCDC196-203ENST00000411796 RXRBP28702 533 aa11.56□□□□□ -0.56
CCDC196-203ENST00000411796 TUSC1Q2TAM9 212 aa11.56□□□□□ -0.56
CCDC196-203ENST00000411796 KIF1AQ12756 1690 aa11.55□□□□□ -0.56
CCDC196-203ENST00000411796 ROBO1Q9Y6N7 1651 aa11.55□□□□□ -0.56
CCDC196-203ENST00000411796 ARHGEF10O15013 1369 aa11.55□□□□□ -0.56
CCDC196-203ENST00000411796 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
CCDC196-203ENST00000411796 QPCTQ16769 361 aa11.55□□□□□ -0.56
CCDC196-203ENST00000411796 FAM160A2Q8N612 972 aaPredicted RBP11.55□□□□□ -0.56
CCDC196-203ENST00000411796 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
CCDC196-203ENST00000411796 CCER2I3L3R5 266 aa11.54□□□□□ -0.56
CCDC196-203ENST00000411796 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
CCDC196-203ENST00000411796 PMFBP1Q8TBY8 1022 aa11.54□□□□□ -0.56
CCDC196-203ENST00000411796 CABLES1Q8TDN4 633 aa11.54□□□□□ -0.56
CCDC196-203ENST00000411796 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
CCDC196-203ENST00000411796 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC196-203ENST00000411796 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
CCDC196-203ENST00000411796 USP32Q8NFA0 1604 aa11.53□□□□□ -0.56
CCDC196-203ENST00000411796 TOPAZ1Q8N9V7 1692 aa11.53□□□□□ -0.56
CCDC196-203ENST00000411796 LILRB3O75022 631 aa11.53□□□□□ -0.56
CCDC196-203ENST00000411796 ADH1BP00325 375 aa11.53□□□□□ -0.56
CCDC196-203ENST00000411796 ABTB2Q8N961 1025 aa11.53□□□□□ -0.56
CCDC196-203ENST00000411796 COG3Q96JB2 828 aa11.53□□□□□ -0.56
CCDC196-203ENST00000411796 PCMTD1Q96MG8 357 aaPredicted RBP11.53□□□□□ -0.56
CCDC196-203ENST00000411796 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
CCDC196-203ENST00000411796 SPATA31A3Q5VYP0 1347 aa11.53□□□□□ -0.56
CCDC196-203ENST00000411796 JCADQ9P266 1359 aa11.53□□□□□ -0.56
CCDC196-203ENST00000411796 MTMR2Q13614 643 aa11.52□□□□□ -0.57
CCDC196-203ENST00000411796 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
CCDC196-203ENST00000411796 PRPF38BQ5VTL8 546 aaKnown RBP11.52□□□□□ -0.57
CCDC196-203ENST00000411796 INSRP06213 1382 aa11.52□□□□□ -0.57
CCDC196-203ENST00000411796 PHLPP1O60346 1717 aa11.52□□□□□ -0.57
CCDC196-203ENST00000411796 RTL5Q5HYW3 569 aaPredicted RBP11.51□□□□□ -0.57
CCDC196-203ENST00000411796 ZBTB3Q9H5J0 574 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms