RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PIK3R5Q8WYR1 880 aa5.28□□□□□ -1.56
PTPN13-202ENST00000411767 SKILP12757 684 aa5.28□□□□□ -1.56
PTPN13-202ENST00000411767 CCDC65Q8IXS2 484 aa5.28□□□□□ -1.56
PTPN13-202ENST00000411767 JMYQ8N9B5 988 aa5.28□□□□□ -1.56
PTPN13-202ENST00000411767 AFAP1L1Q8TED9 768 aa5.28□□□□□ -1.56
PTPN13-202ENST00000411767 SIL1Q9H173 461 aa5.28□□□□□ -1.56
PTPN13-202ENST00000411767 BMP2KQ9NSY1 1161 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-202ENST00000411767 TCERG1LQ5VWI1 586 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 SLC4A10Q6U841 1118 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 EP400NLQ6ZTU2 488 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 PNISRQ8TF01 805 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 SPATA32Q96LK8 384 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC114Q96M63 670 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 SYNCQ9H7C4 482 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 PFDN4Q9NQP4 134 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 TPX2Q9ULW0 747 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 HNRNPCL2B2RXH8 293 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 TRAF5O00463 557 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 HNRNPCL1O60812 293 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 PPP6R3Q5H9R7 873 aaPredicted RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 IQCA1Q86XH1 822 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 CFAP36Q96G28 342 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 XAB2Q9HCS7 855 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 ZKSCAN5Q9Y2L8 839 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 A0A0B4J269 797 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 MTRF1O75570 445 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 GBP1P32455 592 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 LMAN1P49257 510 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 TUBB3Q13509 450 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC125Q86Z20 511 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 FAM8A1Q9UBU6 413 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 KRT8P05787 483 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 SART3Q15020 963 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 MRPS26Q9BYN8 205 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 A0A1W2PRG0 241 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 SMIM24O75264 130 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 LONP1P36776 959 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 LACTBP83111 547 aaPredicted RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 TSNAXIP1Q2TAA8 658 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 THOC7Q6I9Y2 204 aaKnown RBP5.27□□□□□ -1.57
PTPN13-202ENST00000411767 VPS37DQ86XT2 251 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 SPDL1Q96EA4 605 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 SPAG5Q96R06 1193 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 PPP1R12CQ9BZL4 782 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 GOPCQ9HD26 462 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 ZNF131P52739 623 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 PLVAPQ9BX97 442 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 TEKT2Q9UIF3 430 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 ATAD2Q6PL18 1390 aa5.27□□□□□ -1.57
PTPN13-202ENST00000411767 REC8O95072 547 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 HARSP12081 509 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 CKAP4Q07065 602 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 RALYLQ86SE5 291 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 SCOCQ9UIL1 159 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 ZFXP17010 805 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 NONOQ15233 471 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 TEX9Q8N6V9 391 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC77Q9BR77 488 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 HDAC9Q9UKV0 1011 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 AMOTQ4VCS5 1084 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 TAOK1Q7L7X3 1001 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 LCA5Q86VQ0 697 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 TANGO6Q9C0B7 1094 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 MRPL46Q9H2W6 279 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 KINO60870 393 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 XPCQ01831 940 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 LNPKQ9C0E8 428 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 EFCC1Q9HA90 598 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 NFKBIL1Q9UBC1 381 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 CAPN9O14815 690 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 ATP11AP98196 1134 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 NAA25Q14CX7 972 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 LETM2Q2VYF4 491 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 GLE1Q53GS7 698 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 CFAP157Q5JU67 520 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 GKAP1Q5VSY0 366 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 HEATR3Q7Z4Q2 680 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC124Q96CT7 223 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 POGKQ9P215 609 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 ERICH4A6NGS2 130 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 LZTS3O60299 673 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 WBP4O75554 376 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 GAS8O95995 478 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 TTC16Q8NEE8 873 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 ZNF396Q96N95 335 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 SLC4A1P02730 911 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 NOP14P78316 857 aaKnown RBP5.26□□□□□ -1.57
PTPN13-202ENST00000411767 RILPL1Q5EBL4 403 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 SPECC1Q5M775 1068 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 HAUS2Q9NVX0 235 aa5.26□□□□□ -1.57
PTPN13-202ENST00000411767 MAN1A2O60476 641 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 ATP6V1AP38606 617 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 SPTY2D1Q68D10 685 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CPLX4Q7Z7G2 160 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CEP57Q86XR8 500 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 TRIM56Q9BRZ2 755 aaKnown RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 MMRN2Q9H8L6 949 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 ZNF330Q9Y3S2 320 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CRCPO75575 148 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms