RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
LINC00396-201ENST00000411690 DDX54Q8TDD1 881 aaKnown RBP9.31□□□□□ -0.92
LINC00396-201ENST00000411690 DCAF11Q8TEB1 546 aa9.31□□□□□ -0.92
LINC00396-201ENST00000411690 PRIM1P49642 420 aaKnown RBP9.3□□□□□ -0.92
LINC00396-201ENST00000411690 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
LINC00396-201ENST00000411690 FLAD1Q8NFF5 587 aa9.3□□□□□ -0.92
LINC00396-201ENST00000411690 CABP1Q9NZU7 370 aa9.3□□□□□ -0.92
LINC00396-201ENST00000411690 TBC1D12O60347 775 aa9.29□□□□□ -0.92
LINC00396-201ENST00000411690 BCL2L12Q9HB09 334 aa9.29□□□□□ -0.92
LINC00396-201ENST00000411690 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
LINC00396-201ENST00000411690 SLC4A5Q9BY07 1137 aa9.28□□□□□ -0.92
LINC00396-201ENST00000411690 ANKRD36BQ8N2N9 1353 aa9.27□□□□□ -0.93
LINC00396-201ENST00000411690 PIK3C2AO00443 1686 aa9.27□□□□□ -0.93
LINC00396-201ENST00000411690 HMGB2P26583 209 aaKnown RBP9.27□□□□□ -0.93
LINC00396-201ENST00000411690 ARHGAP27Q6ZUM4 889 aa9.27□□□□□ -0.93
LINC00396-201ENST00000411690 WNT2BQ93097 391 aa9.27□□□□□ -0.93
LINC00396-201ENST00000411690 BCS1LQ9Y276 419 aa9.27□□□□□ -0.93
LINC00396-201ENST00000411690 LY75O60449 1722 aa9.27□□□□□ -0.93
LINC00396-201ENST00000411690 CICQ96RK0 1608 aaPredicted RBP9.27□□□□□ -0.93
LINC00396-201ENST00000411690 USP47Q96K76 1375 aa9.26□□□□□ -0.93
LINC00396-201ENST00000411690 SMC1BQ8NDV3 1235 aa9.26□□□□□ -0.93
LINC00396-201ENST00000411690 ZBED2Q9BTP6 218 aa9.26□□□□□ -0.93
LINC00396-201ENST00000411690 RRAGCQ9HB90 399 aa9.26□□□□□ -0.93
LINC00396-201ENST00000411690 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
LINC00396-201ENST00000411690 KDM2BQ8NHM5 1336 aa9.26□□□□□ -0.93
LINC00396-201ENST00000411690 FAM161AQ3B820 660 aa9.25□□□□□ -0.93
LINC00396-201ENST00000411690 ANKRD24Q8TF21 1146 aa9.25□□□□□ -0.93
LINC00396-201ENST00000411690 NSD2O96028 1365 aa9.24□□□□□ -0.93
LINC00396-201ENST00000411690 C9orf131Q5VYM1 1079 aa9.24□□□□□ -0.93
LINC00396-201ENST00000411690 PLEKHG2Q9H7P9 1386 aa9.24□□□□□ -0.93
LINC00396-201ENST00000411690 NFAT5O94916 1531 aa9.23□□□□□ -0.93
LINC00396-201ENST00000411690 FOSBP53539 338 aa9.23□□□□□ -0.93
LINC00396-201ENST00000411690 MRPL50Q8N5N7 158 aaKnown RBP9.23□□□□□ -0.93
LINC00396-201ENST00000411690 TTC21AQ8NDW8 1320 aa9.23□□□□□ -0.93
LINC00396-201ENST00000411690 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
LINC00396-201ENST00000411690 KCPQ6ZWJ8 1503 aa9.22□□□□□ -0.93
LINC00396-201ENST00000411690 FCHSD2O94868 740 aa9.22□□□□□ -0.93
LINC00396-201ENST00000411690 PHF14O94880 888 aa9.22□□□□□ -0.93
LINC00396-201ENST00000411690 PTPREP23469 700 aa9.22□□□□□ -0.93
LINC00396-201ENST00000411690 TGFB2P61812 414 aa9.22□□□□□ -0.93
LINC00396-201ENST00000411690 AK7Q96M32 723 aa9.22□□□□□ -0.93
LINC00396-201ENST00000411690 CENPJQ9HC77 1338 aaPredicted RBP9.22□□□□□ -0.93
LINC00396-201ENST00000411690 DOT1LQ8TEK3 1739 aa9.22□□□□□ -0.93
LINC00396-201ENST00000411690 C10orf71Q711Q0 1435 aa9.22□□□□□ -0.93
LINC00396-201ENST00000411690 C5P01031 1676 aa9.21□□□□□ -0.93
LINC00396-201ENST00000411690 A0A0G2JLW4 131 aa9.21□□□□□ -0.94
LINC00396-201ENST00000411690 GOLGA8CPA6NN73 597 aa9.21□□□□□ -0.94
LINC00396-201ENST00000411690 SMIM5Q71RC9 77 aa9.21□□□□□ -0.94
LINC00396-201ENST00000411690 PRDM10Q9NQV6 1147 aa9.21□□□□□ -0.94
LINC00396-201ENST00000411690 PXDNLA1KZ92 1463 aa9.21□□□□□ -0.94
LINC00396-201ENST00000411690 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
LINC00396-201ENST00000411690 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.2□□□□□ -0.94
LINC00396-201ENST00000411690 AMIGO3Q86WK7 504 aa9.2□□□□□ -0.94
LINC00396-201ENST00000411690 ZCRB1Q8TBF4 217 aaKnown RBP9.2□□□□□ -0.94
LINC00396-201ENST00000411690 FOXN1O15353 648 aa9.19□□□□□ -0.94
LINC00396-201ENST00000411690 MLLT1Q03111 559 aaPredicted RBP9.19□□□□□ -0.94
LINC00396-201ENST00000411690 ADAM33Q9BZ11 813 aa9.19□□□□□ -0.94
LINC00396-201ENST00000411690 RNF181Q9P0P0 153 aa9.19□□□□□ -0.94
LINC00396-201ENST00000411690 NSD3Q9BZ95 1437 aa9.19□□□□□ -0.94
LINC00396-201ENST00000411690 MMP10P09238 476 aa9.18□□□□□ -0.94
LINC00396-201ENST00000411690 DPEP1P16444 411 aa9.18□□□□□ -0.94
LINC00396-201ENST00000411690 SSFA2P28290 1259 aa9.18□□□□□ -0.94
LINC00396-201ENST00000411690 NBPF1Q3BBV0 1214 aa9.18□□□□□ -0.94
LINC00396-201ENST00000411690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
LINC00396-201ENST00000411690 PALLDQ8WX93 1383 aa9.18□□□□□ -0.94
LINC00396-201ENST00000411690 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
LINC00396-201ENST00000411690 N4BP2Q86UW6 1770 aaPredicted RBP9.17□□□□□ -0.94
LINC00396-201ENST00000411690 C4BP0C0L5 1744 aa9.17□□□□□ -0.94
LINC00396-201ENST00000411690 TNRC6CQ9HCJ0 1690 aaKnown RBP9.17□□□□□ -0.94
LINC00396-201ENST00000411690 KTN1Q86UP2 1357 aaKnown RBP9.17□□□□□ -0.94
LINC00396-201ENST00000411690 EVC2Q86UK5 1308 aa9.17□□□□□ -0.94
LINC00396-201ENST00000411690 VEGFAP15692 232 aaPredicted RBP9.17□□□□□ -0.94
LINC00396-201ENST00000411690 CTCFP49711 727 aaPredicted RBP9.17□□□□□ -0.94
LINC00396-201ENST00000411690 ABHD8Q96I13 439 aa9.17□□□□□ -0.94
LINC00396-201ENST00000411690 CRISPLD2Q9H0B8 497 aa9.17□□□□□ -0.94
LINC00396-201ENST00000411690 MKRN1Q9UHC7 482 aaKnown RBP9.17□□□□□ -0.94
LINC00396-201ENST00000411690 USP31Q70CQ4 1352 aa9.16□□□□□ -0.94
LINC00396-201ENST00000411690 ITGBL1O95965 494 aaPredicted RBP9.16□□□□□ -0.94
LINC00396-201ENST00000411690 MPRIPQ6WCQ1 1025 aa9.16□□□□□ -0.94
LINC00396-201ENST00000411690 Q6ZNB5 142 aa9.16□□□□□ -0.94
LINC00396-201ENST00000411690 AIDAQ96BJ3 306 aa9.16□□□□□ -0.94
LINC00396-201ENST00000411690 NBPF3Q9H094 633 aa9.16□□□□□ -0.94
LINC00396-201ENST00000411690 TAF1LQ8IZX4 1826 aa9.16□□□□□ -0.94
LINC00396-201ENST00000411690 LTN1O94822 1766 aa9.16□□□□□ -0.94
LINC00396-201ENST00000411690 PCNTO95613 3336 aa9.16□□□□□ -0.94
LINC00396-201ENST00000411690 PKD1L3Q7Z443 1732 aa9.15□□□□□ -0.94
LINC00396-201ENST00000411690 KIAA1551Q9HCM1 1747 aa9.15□□□□□ -0.94
LINC00396-201ENST00000411690 TOGARAM1Q9Y4F4 1720 aa9.15□□□□□ -0.94
LINC00396-201ENST00000411690 PPP1R15BQ5SWA1 713 aa9.15□□□□□ -0.94
LINC00396-201ENST00000411690 IP6K1Q92551 441 aa9.15□□□□□ -0.94
LINC00396-201ENST00000411690 SMARCC1Q92922 1105 aaPredicted RBP9.15□□□□□ -0.94
LINC00396-201ENST00000411690 CCDC87Q9NVE4 849 aa9.15□□□□□ -0.94
LINC00396-201ENST00000411690 PIM2Q9P1W9 311 aa9.15□□□□□ -0.94
LINC00396-201ENST00000411690 KIF13BQ9NQT8 1826 aa9.15□□□□□ -0.95
LINC00396-201ENST00000411690 GNPATO15228 680 aa9.14□□□□□ -0.95
LINC00396-201ENST00000411690 KCNA3P22001 575 aa9.14□□□□□ -0.95
LINC00396-201ENST00000411690 LBX1P52954 281 aa9.14□□□□□ -0.95
LINC00396-201ENST00000411690 NME9Q86XW9 330 aa9.14□□□□□ -0.95
LINC00396-201ENST00000411690 HS6ST3Q8IZP7 471 aa9.14□□□□□ -0.95
LINC00396-201ENST00000411690 NLGN1Q8N2Q7 840 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms