RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 LDHCP07864 332 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 TTF1Q15361 905 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-208ENST00000410007 SYCP1Q15431 976 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 C20orf194Q5TEA3 1177 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 UBE3BQ7Z3V4 1068 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 SMARCC1Q92922 1105 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-208ENST00000410007 ZNHIT6Q9NWK9 470 aaKnown RBP10.68□□□□□ -0.7
PBRM1-208ENST00000410007 CEP131Q9UPN4 1083 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 TBX22Q9Y458 520 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 ZMYM3Q14202 1370 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 ZNF76P36508 570 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 IQCA1Q86XH1 822 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 ZHX3Q9H4I2 956 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 RDXP35241 583 aaKnown RBP10.67□□□□□ -0.7
PBRM1-208ENST00000410007 EVI5LQ96CN4 794 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 SH2B1Q9NRF2 756 aaPredicted RBP10.67□□□□□ -0.7
PBRM1-208ENST00000410007 MPHOSPH10O00566 681 aaKnown RBP10.67□□□□□ -0.7
PBRM1-208ENST00000410007 RFC4P35249 363 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 CTCFLQ8NI51 663 aaPredicted RBP10.67□□□□□ -0.7
PBRM1-208ENST00000410007 FLT4P35916 1363 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 CDR1P51861 262 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 ACBD3Q9H3P7 528 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 SEC63Q9UGP8 760 aaKnown RBP10.67□□□□□ -0.7
PBRM1-208ENST00000410007 ATP5J2-PTCD1G3V325 749 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 C6orf229H3BNL8 230 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 ZNF213O14771 459 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 SERPINC1P01008 464 aa10.67□□□□□ -0.7
PBRM1-208ENST00000410007 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
PBRM1-208ENST00000410007 ZNF444Q8N0Y2 327 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-208ENST00000410007 RUFY1Q96T51 708 aa10.66□□□□□ -0.7
PBRM1-208ENST00000410007 LUC7LQ9NQ29 371 aaKnown RBP10.66□□□□□ -0.7
PBRM1-208ENST00000410007 BCL11BQ9C0K0 894 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-208ENST00000410007 TRPM2O94759 1503 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
PBRM1-208ENST00000410007 FBLN1P23142 703 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 TNNT3P45378 269 aaPredicted RBP10.65□□□□□ -0.7
PBRM1-208ENST00000410007 EIF4A2Q14240 407 aaKnown RBP10.65□□□□□ -0.7
PBRM1-208ENST00000410007 DDX11Q96FC9 970 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 UPF3BQ9BZI7 483 aaKnown RBP10.65□□□□□ -0.7
PBRM1-208ENST00000410007 NPATQ14207 1427 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 EIF4G3O43432 1585 aaKnown RBP10.65□□□□□ -0.7
PBRM1-208ENST00000410007 DDB1Q16531 1140 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 POLKQ9UBT6 870 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 EIF2AK4Q9P2K8 1649 aaKnown RBP10.65□□□□□ -0.7
PBRM1-208ENST00000410007 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
PBRM1-208ENST00000410007 CCDC152Q4G0S7 254 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 SPTY2D1Q68D10 685 aaPredicted RBP10.65□□□□□ -0.7
PBRM1-208ENST00000410007 CEP57L1Q8IYX8 460 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 CAGE1Q8TC20 777 aa10.65□□□□□ -0.7
PBRM1-208ENST00000410007 POLR3AO14802 1390 aaPredicted RBP10.65□□□□□ -0.71
PBRM1-208ENST00000410007 ALDH1L1O75891 902 aa10.65□□□□□ -0.71
PBRM1-208ENST00000410007 UQCRFS1P1P0C7P4 283 aa10.65□□□□□ -0.71
PBRM1-208ENST00000410007 HMGN5P82970 282 aaKnown RBP10.65□□□□□ -0.71
PBRM1-208ENST00000410007 PPFIBP1Q86W92 1011 aa10.65□□□□□ -0.71
PBRM1-208ENST00000410007 NUP62CLQ9H1M0 184 aa10.65□□□□□ -0.71
PBRM1-208ENST00000410007 CBFA2T2O43439 604 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 RANBP6O60518 1105 aaKnown RBP10.64□□□□□ -0.71
PBRM1-208ENST00000410007 IL2RBP14784 551 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 NBPF6Q5VWK0 638 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 NBPF5PQ86XG9 351 aaPredicted RBP10.64□□□□□ -0.71
PBRM1-208ENST00000410007 NBPF4Q96M43 638 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 BAG3O95817 575 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 ST5P78524 1137 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 TXLNBQ8N3L3 684 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 HSP90AA2PQ14568 343 aaPredicted RBP10.64□□□□□ -0.71
PBRM1-208ENST00000410007 PIBF1Q8WXW3 757 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 PDCL3Q9H2J4 239 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 MYO6Q9UM54 1294 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 PLEKHH1Q9ULM0 1364 aa10.64□□□□□ -0.71
PBRM1-208ENST00000410007 TNIP1Q15025 636 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 XAGE3Q8WTP9 111 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 LRRC59Q96AG4 307 aaKnown RBP10.63□□□□□ -0.71
PBRM1-208ENST00000410007 KCNA6P17658 529 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 BMP2KLQ5H9B9 411 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 CHPF2Q9P2E5 772 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 SLC12A7Q9Y666 1083 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 GOLIM4O00461 696 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 GCP02774 474 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 TEX35Q5T0J7 233 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 TANGO6Q9C0B7 1094 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 ANXA1P04083 346 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 COPS6Q7L5N1 327 aa10.63□□□□□ -0.71
PBRM1-208ENST00000410007 PHAXQ9H814 394 aaKnown RBP10.63□□□□□ -0.71
PBRM1-208ENST00000410007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.713e-10■■■■■ 153.8
PBRM1-208ENST00000410007 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 TTLL5Q6EMB2 1281 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 C8orf76Q96K31 380 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 SCAND2PQ9GZW5 306 aaPredicted RBP10.62□□□□□ -0.71
PBRM1-208ENST00000410007 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 IFIT3O14879 490 aaKnown RBP10.62□□□□□ -0.71
PBRM1-208ENST00000410007 HSP90B2PQ58FF3 399 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 KSR2Q6VAB6 950 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 IL27Q8NEV9 243 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 LIMCH1Q9UPQ0 1083 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 ABCC1P33527 1531 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 MCM4P33991 863 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 ATP10AO60312 1499 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 YTHDC2Q9H6S0 1430 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms