RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 AOX1Q06278 1338 aa18.43■□□□□ 0.54
LYSMD4-204ENST00000409796 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
LYSMD4-204ENST00000409796 USHBP1Q8N6Y0 703 aa18.43■□□□□ 0.54
LYSMD4-204ENST00000409796 IL17RAQ96F46 866 aa18.42■□□□□ 0.54
LYSMD4-204ENST00000409796 INTS4Q96HW7 963 aaKnown RBP18.42■□□□□ 0.54
LYSMD4-204ENST00000409796 SYCE3A1L190 88 aa18.41■□□□□ 0.54
LYSMD4-204ENST00000409796 LRSAM1Q6UWE0 723 aa18.41■□□□□ 0.54
LYSMD4-204ENST00000409796 PPP1R42Q7Z4L9 355 aa18.41■□□□□ 0.54
LYSMD4-204ENST00000409796 MAP4K4O95819 1239 aaPredicted RBP18.41■□□□□ 0.54
LYSMD4-204ENST00000409796 ABTB2Q8N961 1025 aa18.41■□□□□ 0.54
LYSMD4-204ENST00000409796 SURF6O75683 361 aaKnown RBP18.4■□□□□ 0.54
LYSMD4-204ENST00000409796 USP54Q70EL1 1684 aa18.4■□□□□ 0.54
LYSMD4-204ENST00000409796 POLA2Q14181 598 aa18.4■□□□□ 0.54
LYSMD4-204ENST00000409796 PDLIM2Q96JY6 352 aa18.4■□□□□ 0.54
LYSMD4-204ENST00000409796 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
LYSMD4-204ENST00000409796 LMTK3Q96Q04 1460 aa18.4■□□□□ 0.54
LYSMD4-204ENST00000409796 MBD3O95983 291 aa18.39■□□□□ 0.54
LYSMD4-204ENST00000409796 RAB11FIP3O75154 756 aa18.39■□□□□ 0.53
LYSMD4-204ENST00000409796 SETD1BQ9UPS6 1966 aaKnown RBP18.39■□□□□ 0.53
LYSMD4-204ENST00000409796 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
LYSMD4-204ENST00000409796 MSNP26038 577 aaKnown RBP18.38■□□□□ 0.53
LYSMD4-204ENST00000409796 HSPA4P34932 840 aa18.38■□□□□ 0.53
LYSMD4-204ENST00000409796 PI4K2BQ8TCG2 481 aa18.38■□□□□ 0.53
LYSMD4-204ENST00000409796 RHPN1Q8TCX5 695 aa18.38■□□□□ 0.53
LYSMD4-204ENST00000409796 LTN1O94822 1766 aa18.38■□□□□ 0.53
LYSMD4-204ENST00000409796 TPM2P07951 284 aa18.37■□□□□ 0.53
LYSMD4-204ENST00000409796 TCHHQ07283 1943 aa18.37■□□□□ 0.53
LYSMD4-204ENST00000409796 SRGAP3O43295 1099 aa18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 NBPF7P0C2Y1 421 aaPredicted RBP18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 KCNA6P17658 529 aa18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 HS1BP3Q53T59 392 aa18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 C14orf37Q86TY3 774 aa18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 PDCL3Q9H2J4 239 aa18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 LGR6Q9HBX8 967 aa18.36■□□□□ 0.53
LYSMD4-204ENST00000409796 KIF1BPQ96EK5 621 aa18.35■□□□□ 0.53
LYSMD4-204ENST00000409796 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
LYSMD4-204ENST00000409796 RAD50Q92878 1312 aa18.35■□□□□ 0.53
LYSMD4-204ENST00000409796 SGSM2O43147 1006 aa18.35■□□□□ 0.53
LYSMD4-204ENST00000409796 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 GDPD2Q9HCC8 539 aa18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 KCNQ3O43525 872 aa18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 OFD1O75665 1012 aa18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 DNAAF4Q8WXU2 420 aa18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 NOL7Q9UMY1 257 aaKnown RBP18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
LYSMD4-204ENST00000409796 PI4KAP2A4QPH2 592 aa18.33■□□□□ 0.53
LYSMD4-204ENST00000409796 PLEKHG5O94827 1062 aa18.33■□□□□ 0.53
LYSMD4-204ENST00000409796 KIAA1211Q6ZU35 1233 aa18.33■□□□□ 0.53
LYSMD4-204ENST00000409796 PI4KAP1Q8N8J0 262 aa18.33■□□□□ 0.53
LYSMD4-204ENST00000409796 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.52
LYSMD4-204ENST00000409796 GADD45BO75293 160 aaPredicted RBP18.33■□□□□ 0.52
LYSMD4-204ENST00000409796 ANXA1P04083 346 aa18.33■□□□□ 0.52
LYSMD4-204ENST00000409796 NBPF6Q5VWK0 638 aa18.33■□□□□ 0.52
LYSMD4-204ENST00000409796 RNF214Q8ND24 703 aa18.33■□□□□ 0.52
LYSMD4-204ENST00000409796 NBPF4Q96M43 638 aa18.33■□□□□ 0.52
LYSMD4-204ENST00000409796 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.52
LYSMD4-204ENST00000409796 CNTROBQ8N137 903 aa18.32■□□□□ 0.52
LYSMD4-204ENST00000409796 IP6K1Q92551 441 aa18.32■□□□□ 0.52
LYSMD4-204ENST00000409796 RPAP1Q9BWH6 1393 aaPredicted RBP18.32■□□□□ 0.52
LYSMD4-204ENST00000409796 RGPD2P0DJD1 1756 aa18.31■□□□□ 0.52
LYSMD4-204ENST00000409796 USP48Q86UV5 1035 aa18.31■□□□□ 0.52
LYSMD4-204ENST00000409796 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
LYSMD4-204ENST00000409796 CRYBG1Q9Y4K1 1723 aa18.31■□□□□ 0.52
LYSMD4-204ENST00000409796 TTC14Q96N46 770 aa18.31■□□□□ 0.52
LYSMD4-204ENST00000409796 HOXB7P09629 217 aa18.3■□□□□ 0.52
LYSMD4-204ENST00000409796 TSPY26PQ9H489 355 aa18.3■□□□□ 0.52
LYSMD4-204ENST00000409796 CWC27Q6UX04 472 aaKnown RBP18.3■□□□□ 0.52
LYSMD4-204ENST00000409796 LARP6Q9BRS8 491 aaKnown RBP18.3■□□□□ 0.52
LYSMD4-204ENST00000409796 AK2P54819 239 aa18.29■□□□□ 0.52
LYSMD4-204ENST00000409796 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.29■□□□□ 0.52
LYSMD4-204ENST00000409796 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
LYSMD4-204ENST00000409796 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
LYSMD4-204ENST00000409796 ADCY9O60503 1353 aa18.29■□□□□ 0.52
LYSMD4-204ENST00000409796 FER1L4A9Z1Z3 1794 aa18.29■□□□□ 0.52
LYSMD4-204ENST00000409796 ZNF500O60304 480 aaPredicted RBP18.29■□□□□ 0.52
LYSMD4-204ENST00000409796 SPG7Q9UQ90 795 aa18.29■□□□□ 0.52
LYSMD4-204ENST00000409796 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
LYSMD4-204ENST00000409796 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
LYSMD4-204ENST00000409796 NFAT5O94916 1531 aa18.28■□□□□ 0.52
LYSMD4-204ENST00000409796 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
LYSMD4-204ENST00000409796 RUFY3Q7L099 469 aa18.28■□□□□ 0.52
LYSMD4-204ENST00000409796 ZKSCAN5Q9Y2L8 839 aa18.28■□□□□ 0.52
LYSMD4-204ENST00000409796 USP42Q9H9J4 1324 aaKnown RBP18.28■□□□□ 0.52
LYSMD4-204ENST00000409796 LMO7Q8WWI1 1683 aa18.27■□□□□ 0.52
LYSMD4-204ENST00000409796 HSPA2P54652 639 aa18.27■□□□□ 0.52
LYSMD4-204ENST00000409796 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
LYSMD4-204ENST00000409796 TEFQ10587 303 aa18.27■□□□□ 0.52
LYSMD4-204ENST00000409796 CPA1P15085 419 aa18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 XPCQ01831 940 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 CCDC39Q9UFE4 941 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms