RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 LARP1Q6PKG0 1096 aaKnown RBP9.5□□□□□ -0.89
LSM5-203ENST00000409782 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
LSM5-203ENST00000409782 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
LSM5-203ENST00000409782 CFAP74Q9C0B2 1584 aa9.5□□□□□ -0.89
LSM5-203ENST00000409782 CASKIN1Q8WXD9 1431 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 CCDC18Q5T9S5 1454 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 FYCO1Q9BQS8 1478 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 PLEKHD1A6NEE1 506 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 ST8SIA5O15466 376 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 TIMP2P16035 220 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 PHTF2Q8N3S3 785 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 C1orf216Q8TAB5 229 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 KLF16Q9BXK1 252 aaPredicted RBP9.49□□□□□ -0.89
LSM5-203ENST00000409782 MKRN1Q9UHC7 482 aaKnown RBP9.49□□□□□ -0.89
LSM5-203ENST00000409782 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.49□□□□□ -0.89
LSM5-203ENST00000409782 TTC37Q6PGP7 1564 aa9.49□□□□□ -0.89
LSM5-203ENST00000409782 SLFNL1Q499Z3 407 aa9.48□□□□□ -0.89
LSM5-203ENST00000409782 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
LSM5-203ENST00000409782 DNAJC14Q6Y2X3 702 aaPredicted RBP9.48□□□□□ -0.89
LSM5-203ENST00000409782 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
LSM5-203ENST00000409782 KIF14Q15058 1648 aa9.48□□□□□ -0.89
LSM5-203ENST00000409782 ERVH48-1M5A8F1 160 aa9.47□□□□□ -0.89
LSM5-203ENST00000409782 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
LSM5-203ENST00000409782 TROQ12816 1431 aaPredicted RBP9.47□□□□□ -0.89
LSM5-203ENST00000409782 SOWAHDA6NJG2 315 aa9.46□□□□□ -0.9
LSM5-203ENST00000409782 RNF135Q8IUD6 432 aa9.46□□□□□ -0.9
LSM5-203ENST00000409782 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.9
LSM5-203ENST00000409782 IGSF5Q9NSI5 407 aa9.46□□□□□ -0.9
LSM5-203ENST00000409782 CDK11AQ9UQ88 783 aaPredicted RBP9.46□□□□□ -0.9
LSM5-203ENST00000409782 LRRIQ1Q96JM4 1722 aa9.45□□□□□ -0.9
LSM5-203ENST00000409782 RASA1P20936 1047 aa9.45□□□□□ -0.9
LSM5-203ENST00000409782 NCOA4Q13772 614 aa9.45□□□□□ -0.9
LSM5-203ENST00000409782 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
LSM5-203ENST00000409782 PLPP7Q8NBV4 271 aa9.45□□□□□ -0.9
LSM5-203ENST00000409782 ESF1Q9H501 851 aaKnown RBP9.45□□□□□ -0.9
LSM5-203ENST00000409782 SLAIN2Q9P270 581 aa9.45□□□□□ -0.9
LSM5-203ENST00000409782 FANCAO15360 1455 aa9.45□□□□□ -0.9
LSM5-203ENST00000409782 FRMPD1Q5SYB0 1578 aa9.45□□□□□ -0.9
LSM5-203ENST00000409782 LCE2BO14633 110 aa9.44□□□□□ -0.9
LSM5-203ENST00000409782 IGSF3O75054 1194 aa9.44□□□□□ -0.9
LSM5-203ENST00000409782 UPP2O95045 317 aa9.44□□□□□ -0.9
LSM5-203ENST00000409782 TMPRSS4Q9NRS4 437 aa9.44□□□□□ -0.9
LSM5-203ENST00000409782 PCDHB11Q9Y5F2 797 aa9.44□□□□□ -0.9
LSM5-203ENST00000409782 CEP162Q5TB80 1403 aa9.44□□□□□ -0.9
LSM5-203ENST00000409782 MYO5CQ9NQX4 1742 aa9.43□□□□□ -0.9
LSM5-203ENST00000409782 ARHGEF40Q8TER5 1519 aa9.43□□□□□ -0.9
LSM5-203ENST00000409782 ADGRL1O94910 1474 aa9.43□□□□□ -0.9
LSM5-203ENST00000409782 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
LSM5-203ENST00000409782 ATP1A2P50993 1020 aa9.43□□□□□ -0.9
LSM5-203ENST00000409782 EML3Q32P44 896 aa9.43□□□□□ -0.9
LSM5-203ENST00000409782 DEPDC4Q8N2C3 294 aa9.43□□□□□ -0.9
LSM5-203ENST00000409782 ZNF784Q8NCA9 323 aaPredicted RBP9.43□□□□□ -0.9
LSM5-203ENST00000409782 ZMYM4Q5VZL5 1548 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 DENND4BO75064 1496 aaPredicted RBP9.42□□□□□ -0.9
LSM5-203ENST00000409782 PLCH2O75038 1416 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 AKNAQ7Z591 1439 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 UNCXA6NJT0 531 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 SCARF1Q14162 830 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 SIRT1Q96EB6 747 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 ATP13A2Q9NQ11 1180 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 EGFL7Q9UHF1 273 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 RICTORQ6R327 1708 aa9.42□□□□□ -0.9
LSM5-203ENST00000409782 SIX5Q8N196 739 aa9.41□□□□□ -0.9
LSM5-203ENST00000409782 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
LSM5-203ENST00000409782 CYLDQ9NQC7 956 aa9.41□□□□□ -0.9
LSM5-203ENST00000409782 DACH1Q9UI36 760 aa9.41□□□□□ -0.9
LSM5-203ENST00000409782 POGZQ7Z3K3 1410 aa9.4□□□□□ -0.9
LSM5-203ENST00000409782 BMP1P13497 986 aa9.4□□□□□ -0.9
LSM5-203ENST00000409782 MRPL14Q6P1L8 145 aaKnown RBP9.4□□□□□ -0.9
LSM5-203ENST00000409782 Q6ZVU0 165 aa9.4□□□□□ -0.9
LSM5-203ENST00000409782 OGFOD1Q8N543 542 aa9.4□□□□□ -0.9
LSM5-203ENST00000409782 MEIOBQ8N635 442 aa9.4□□□□□ -0.9
LSM5-203ENST00000409782 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
LSM5-203ENST00000409782 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
LSM5-203ENST00000409782 NOD1Q9Y239 953 aa9.4□□□□□ -0.9
LSM5-203ENST00000409782 PREX2Q70Z35 1606 aa9.39□□□□□ -0.91
LSM5-203ENST00000409782 MYCP01106 439 aaPredicted RBP9.39□□□□□ -0.91
LSM5-203ENST00000409782 DPYDQ12882 1025 aa9.39□□□□□ -0.91
LSM5-203ENST00000409782 CBLBQ13191 982 aa9.39□□□□□ -0.91
LSM5-203ENST00000409782 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
LSM5-203ENST00000409782 CCDC85AQ96PX6 553 aaPredicted RBP9.39□□□□□ -0.91
LSM5-203ENST00000409782 SENP2Q9HC62 589 aa9.39□□□□□ -0.91
LSM5-203ENST00000409782 DNAAF2Q9NVR5 837 aaKnown RBP9.39□□□□□ -0.91
LSM5-203ENST00000409782 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
LSM5-203ENST00000409782 LILRA1O75019 489 aa9.38□□□□□ -0.91
LSM5-203ENST00000409782 DKK1O94907 266 aa9.38□□□□□ -0.91
LSM5-203ENST00000409782 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
LSM5-203ENST00000409782 MAGI2Q86UL8 1455 aa9.38□□□□□ -0.91
LSM5-203ENST00000409782 ZFYVE16Q7Z3T8 1539 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 EHBP1L1Q8N3D4 1523 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 RAPGEF3O95398 923 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 BMP2P12643 396 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 CLDN10P78369 228 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 USP4Q13107 963 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 TAS1R3Q7RTX0 852 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
LSM5-203ENST00000409782 KIFC2Q96AC6 838 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms