RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IL1RAPL2Q9NP60 686 aa18.74■□□□□ 0.59
SCAMP4-202ENST00000409472 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
SCAMP4-202ENST00000409472 SNX21Q969T3 373 aa18.73■□□□□ 0.59
SCAMP4-202ENST00000409472 NPHP3Q7Z494 1330 aa18.73■□□□□ 0.59
SCAMP4-202ENST00000409472 RAPGEF4Q8WZA2 1011 aa18.72■□□□□ 0.59
SCAMP4-202ENST00000409472 OSBPL3Q9H4L5 887 aa18.72■□□□□ 0.59
SCAMP4-202ENST00000409472 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
SCAMP4-202ENST00000409472 CADPS2Q86UW7 1296 aa18.71■□□□□ 0.59
SCAMP4-202ENST00000409472 CSB-PGBD3P0DP91 1061 aa18.71■□□□□ 0.59
SCAMP4-202ENST00000409472 MX1P20591 662 aa18.71■□□□□ 0.59
SCAMP4-202ENST00000409472 DDIT3P35638 169 aa18.71■□□□□ 0.59
SCAMP4-202ENST00000409472 SSH3Q8TE77 659 aa18.71■□□□□ 0.59
SCAMP4-202ENST00000409472 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
SCAMP4-202ENST00000409472 DBF4Q9UBU7 674 aaPredicted RBP18.71■□□□□ 0.59
SCAMP4-202ENST00000409472 MAP3K2Q9Y2U5 619 aa18.7■□□□□ 0.58
SCAMP4-202ENST00000409472 SPATA31A3Q5VYP0 1347 aa18.7■□□□□ 0.58
SCAMP4-202ENST00000409472 PHKG2P15735 406 aa18.7■□□□□ 0.58
SCAMP4-202ENST00000409472 CWF19L2Q2TBE0 894 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-202ENST00000409472 LMTK3Q96Q04 1460 aa18.7■□□□□ 0.58
SCAMP4-202ENST00000409472 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
SCAMP4-202ENST00000409472 STRCQ7RTU9 1775 aa18.69■□□□□ 0.58
SCAMP4-202ENST00000409472 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
SCAMP4-202ENST00000409472 POLA2Q14181 598 aa18.69■□□□□ 0.58
SCAMP4-202ENST00000409472 BRINP3Q76B58 766 aa18.69■□□□□ 0.58
SCAMP4-202ENST00000409472 NUTM1Q86Y26 1132 aa18.69■□□□□ 0.58
SCAMP4-202ENST00000409472 NFATC2IPQ8NCF5 419 aa18.69■□□□□ 0.58
SCAMP4-202ENST00000409472 HSP90AB1P08238 724 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-202ENST00000409472 CYP27B1O15528 508 aa18.68■□□□□ 0.58
SCAMP4-202ENST00000409472 SURF6O75683 361 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-202ENST00000409472 PDIA6Q15084 440 aa18.68■□□□□ 0.58
SCAMP4-202ENST00000409472 CHMP5Q9NZZ3 219 aa18.68■□□□□ 0.58
SCAMP4-202ENST00000409472 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
SCAMP4-202ENST00000409472 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-202ENST00000409472 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
SCAMP4-202ENST00000409472 SLC52A2Q9HAB3 445 aa18.67■□□□□ 0.58
SCAMP4-202ENST00000409472 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
SCAMP4-202ENST00000409472 PKD1L3Q7Z443 1732 aa18.67■□□□□ 0.58
SCAMP4-202ENST00000409472 K7ELQ4 463 aaPredicted RBP18.66■□□□□ 0.58
SCAMP4-202ENST00000409472 IL25Q9H293 177 aa18.65■□□□□ 0.58
SCAMP4-202ENST00000409472 ZNF335Q9H4Z2 1342 aaPredicted RBP18.65■□□□□ 0.58
SCAMP4-202ENST00000409472 KSR2Q6VAB6 950 aa18.64■□□□□ 0.58
SCAMP4-202ENST00000409472 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.58
SCAMP4-202ENST00000409472 GLI3P10071 1580 aa18.64■□□□□ 0.57
SCAMP4-202ENST00000409472 MAP4K4O95819 1239 aaPredicted RBP18.64■□□□□ 0.57
SCAMP4-202ENST00000409472 MYL6BP14649 208 aa18.64■□□□□ 0.57
SCAMP4-202ENST00000409472 RHPN1Q8TCX5 695 aa18.64■□□□□ 0.57
SCAMP4-202ENST00000409472 RILPL2Q969X0 211 aa18.64■□□□□ 0.57
SCAMP4-202ENST00000409472 ZMYND15Q9H091 742 aa18.64■□□□□ 0.57
SCAMP4-202ENST00000409472 TRIM6-TRIM34B2RNG4 842 aa18.63■□□□□ 0.57
SCAMP4-202ENST00000409472 ERC2O15083 957 aa18.63■□□□□ 0.57
SCAMP4-202ENST00000409472 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
SCAMP4-202ENST00000409472 STAP2Q9UGK3 403 aa18.63■□□□□ 0.57
SCAMP4-202ENST00000409472 SPG7Q9UQ90 795 aa18.63■□□□□ 0.57
SCAMP4-202ENST00000409472 MRC1P22897 1456 aa18.63■□□□□ 0.57
SCAMP4-202ENST00000409472 MCM4P33991 863 aa18.62■□□□□ 0.57
SCAMP4-202ENST00000409472 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
SCAMP4-202ENST00000409472 DDX21Q9NR30 783 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCAMP4-202ENST00000409472 PA2G4Q9UQ80 394 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-202ENST00000409472 CPDO75976 1380 aa18.62■□□□□ 0.57
SCAMP4-202ENST00000409472 ABCC6O95255 1503 aa18.62■□□□□ 0.57
SCAMP4-202ENST00000409472 AK9Q5TCS8 1911 aa18.62■□□□□ 0.57
SCAMP4-202ENST00000409472 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
SCAMP4-202ENST00000409472 KAZALD1Q96I82 304 aa18.61■□□□□ 0.57
SCAMP4-202ENST00000409472 RABEP1Q15276 862 aa18.61■□□□□ 0.57
SCAMP4-202ENST00000409472 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
SCAMP4-202ENST00000409472 ESYT1Q9BSJ8 1104 aa18.61■□□□□ 0.57
SCAMP4-202ENST00000409472 HYPKQ9NX55 129 aa18.61■□□□□ 0.57
SCAMP4-202ENST00000409472 C9orf78Q9NZ63 289 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-202ENST00000409472 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
SCAMP4-202ENST00000409472 CHMLP26374 656 aa18.6■□□□□ 0.57
SCAMP4-202ENST00000409472 USP16Q9Y5T5 823 aa18.6■□□□□ 0.57
SCAMP4-202ENST00000409472 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.6■□□□□ 0.57
SCAMP4-202ENST00000409472 REC8O95072 547 aa18.6■□□□□ 0.57
SCAMP4-202ENST00000409472 HSP90AA1P07900 732 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-202ENST00000409472 SUCLG2Q96I99 432 aa18.6■□□□□ 0.57
SCAMP4-202ENST00000409472 PALD1Q9ULE6 856 aa18.6■□□□□ 0.57
SCAMP4-202ENST00000409472 ABCA3Q99758 1704 aa18.59■□□□□ 0.57
SCAMP4-202ENST00000409472 XAGE3Q8WTP9 111 aa18.59■□□□□ 0.57
SCAMP4-202ENST00000409472 TNPO1Q92973 898 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-202ENST00000409472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.59■□□□□ 0.57
SCAMP4-202ENST00000409472 ALDH1L1O75891 902 aa18.59■□□□□ 0.57
SCAMP4-202ENST00000409472 CHMP4AQ9BY43 222 aa18.59■□□□□ 0.57
SCAMP4-202ENST00000409472 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
SCAMP4-202ENST00000409472 RAB11FIP3O75154 756 aa18.58■□□□□ 0.56
SCAMP4-202ENST00000409472 MTX1Q13505 466 aa18.58■□□□□ 0.56
SCAMP4-202ENST00000409472 LRP10Q7Z4F1 713 aa18.58■□□□□ 0.56
SCAMP4-202ENST00000409472 KIF1BPQ96EK5 621 aa18.58■□□□□ 0.56
SCAMP4-202ENST00000409472 LINS1Q8NG48 757 aa18.57■□□□□ 0.56
SCAMP4-202ENST00000409472 DCAF5Q96JK2 942 aa18.57■□□□□ 0.56
SCAMP4-202ENST00000409472 GRM8O00222 908 aa18.57■□□□□ 0.56
SCAMP4-202ENST00000409472 COPS6Q7L5N1 327 aa18.57■□□□□ 0.56
SCAMP4-202ENST00000409472 BICC1Q9H694 974 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-202ENST00000409472 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 PARP4Q9UKK3 1724 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 COL5A2P05997 1499 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 OS9Q13438 667 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 RAB3GAP1Q15042 981 aa18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 RIC3Q7Z5B4 369 aa18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 ANO2Q9NQ90 1003 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms