RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
CUL1-202ENST00000409469 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
CUL1-202ENST00000409469 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
CUL1-202ENST00000409469 UPF2Q9HAU5 1272 aaKnown RBP12.36□□□□□ -0.43
CUL1-202ENST00000409469 CWF19L2Q2TBE0 894 aaKnown RBP12.36□□□□□ -0.43
CUL1-202ENST00000409469 ZNF790Q6PG37 636 aa12.36□□□□□ -0.43
CUL1-202ENST00000409469 LARP1Q6PKG0 1096 aaKnown RBP12.36□□□□□ -0.43
CUL1-202ENST00000409469 ZNF496Q96IT1 587 aaPredicted RBP12.36□□□□□ -0.43
CUL1-202ENST00000409469 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
CUL1-202ENST00000409469 ADCY9O60503 1353 aa12.36□□□□□ -0.43
CUL1-202ENST00000409469 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
CUL1-202ENST00000409469 CRYBG1Q9Y4K1 1723 aa12.35□□□□□ -0.43
CUL1-202ENST00000409469 IFNL2Q8IZJ0 200 aa12.35□□□□□ -0.43
CUL1-202ENST00000409469 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
CUL1-202ENST00000409469 C22orf23Q9BZE7 217 aa12.35□□□□□ -0.43
CUL1-202ENST00000409469 MAP3K2Q9Y2U5 619 aa12.35□□□□□ -0.43
CUL1-202ENST00000409469 UBTFL1P0CB47 393 aaPredicted RBP12.35□□□□□ -0.43
CUL1-202ENST00000409469 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
CUL1-202ENST00000409469 TBC1D9Q6ZT07 1266 aa12.35□□□□□ -0.43
CUL1-202ENST00000409469 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
CUL1-202ENST00000409469 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
CUL1-202ENST00000409469 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
CUL1-202ENST00000409469 DBF4Q9UBU7 674 aaPredicted RBP12.34□□□□□ -0.43
CUL1-202ENST00000409469 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
CUL1-202ENST00000409469 BEND3Q5T5X7 828 aa12.33□□□□□ -0.44
CUL1-202ENST00000409469 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
CUL1-202ENST00000409469 JARID2Q92833 1246 aaPredicted RBP12.33□□□□□ -0.44
CUL1-202ENST00000409469 CPDO75976 1380 aa12.33□□□□□ -0.44
CUL1-202ENST00000409469 WDR17Q8IZU2 1322 aa12.32□□□□□ -0.44
CUL1-202ENST00000409469 GNAI3P08754 354 aa12.32□□□□□ -0.44
CUL1-202ENST00000409469 PDIA6Q15084 440 aa12.32□□□□□ -0.44
CUL1-202ENST00000409469 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
CUL1-202ENST00000409469 COL5A2P05997 1499 aaPredicted RBP12.32□□□□□ -0.44
CUL1-202ENST00000409469 HMMRO75330 724 aa12.32□□□□□ -0.44
CUL1-202ENST00000409469 CABP4P57796 275 aa12.32□□□□□ -0.44
CUL1-202ENST00000409469 EVA1CP58658 441 aa12.32□□□□□ -0.44
CUL1-202ENST00000409469 HEG1Q9ULI3 1381 aa12.31□□□□□ -0.44
CUL1-202ENST00000409469 HOXB7P09629 217 aa12.31□□□□□ -0.44
CUL1-202ENST00000409469 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
CUL1-202ENST00000409469 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
CUL1-202ENST00000409469 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
CUL1-202ENST00000409469 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
CUL1-202ENST00000409469 ATP8B2P98198 1209 aa12.31□□□□□ -0.44
CUL1-202ENST00000409469 TTC5Q8N0Z6 440 aa12.31□□□□□ -0.44
CUL1-202ENST00000409469 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
CUL1-202ENST00000409469 SIPA1L3O60292 1781 aaPredicted RBP12.31□□□□□ -0.44
CUL1-202ENST00000409469 SOS1Q07889 1333 aaPredicted RBP12.3□□□□□ -0.44
CUL1-202ENST00000409469 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
CUL1-202ENST00000409469 C5P01031 1676 aa12.3□□□□□ -0.44
CUL1-202ENST00000409469 ZBTB22O15209 634 aa12.3□□□□□ -0.44
CUL1-202ENST00000409469 SDSP20132 328 aa12.3□□□□□ -0.44
CUL1-202ENST00000409469 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
CUL1-202ENST00000409469 COPS6Q7L5N1 327 aa12.29□□□□□ -0.44
CUL1-202ENST00000409469 NUTM1Q86Y26 1132 aa12.29□□□□□ -0.44
CUL1-202ENST00000409469 XAGE3Q8WTP9 111 aa12.29□□□□□ -0.44
CUL1-202ENST00000409469 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
CUL1-202ENST00000409469 SCN11AQ9UI33 1791 aa12.29□□□□□ -0.44
CUL1-202ENST00000409469 OVOS2A0A0G2JMS6 1433 aa12.29□□□□□ -0.44
CUL1-202ENST00000409469 SURF6O75683 361 aaKnown RBP12.29□□□□□ -0.44
CUL1-202ENST00000409469 C9orf78Q9NZ63 289 aaPredicted RBP12.29□□□□□ -0.44
CUL1-202ENST00000409469 MAP4K4O95819 1239 aaPredicted RBP12.28□□□□□ -0.44
CUL1-202ENST00000409469 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
CUL1-202ENST00000409469 PA2G4Q9UQ80 394 aaKnown RBP12.28□□□□□ -0.44
CUL1-202ENST00000409469 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
CUL1-202ENST00000409469 IL2RBP14784 551 aa12.28□□□□□ -0.44
CUL1-202ENST00000409469 KSR2Q6VAB6 950 aa12.28□□□□□ -0.44
CUL1-202ENST00000409469 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
CUL1-202ENST00000409469 DDX21Q9NR30 783 aaKnown RBP eCLIP12.28□□□□□ -0.44
CUL1-202ENST00000409469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.444e-7■■■■■ 28.4
CUL1-202ENST00000409469 PDE1AP54750 535 aa12.28□□□□□ -0.44
CUL1-202ENST00000409469 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
CUL1-202ENST00000409469 ARID3AQ99856 593 aa12.28□□□□□ -0.44
CUL1-202ENST00000409469 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.44
CUL1-202ENST00000409469 ADAMTS7Q9UKP4 1686 aa12.27□□□□□ -0.44
CUL1-202ENST00000409469 CDC45O75419 566 aa12.27□□□□□ -0.45
CUL1-202ENST00000409469 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.45
CUL1-202ENST00000409469 IBTKQ9P2D0 1353 aaPredicted RBP12.27□□□□□ -0.45
CUL1-202ENST00000409469 IGKV5-2P06315 115 aa12.27□□□□□ -0.45
CUL1-202ENST00000409469 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.45
CUL1-202ENST00000409469 MYD88Q99836 296 aa12.27□□□□□ -0.45
CUL1-202ENST00000409469 HYPKQ9NX55 129 aa12.27□□□□□ -0.45
CUL1-202ENST00000409469 ABCA3Q99758 1704 aa12.27□□□□□ -0.45
CUL1-202ENST00000409469 ATP5J2-PTCD1G3V325 749 aa12.26□□□□□ -0.45
CUL1-202ENST00000409469 CD2BP2O95400 341 aaKnown RBP12.26□□□□□ -0.45
CUL1-202ENST00000409469 UNC5CLQ8IV45 518 aa12.26□□□□□ -0.45
CUL1-202ENST00000409469 ZNF330Q9Y3S2 320 aaPredicted RBP12.26□□□□□ -0.45
CUL1-202ENST00000409469 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
CUL1-202ENST00000409469 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
CUL1-202ENST00000409469 ADAMTS2O95450 1211 aa12.26□□□□□ -0.45
CUL1-202ENST00000409469 SSH3Q8TE77 659 aa12.26□□□□□ -0.45
CUL1-202ENST00000409469 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
CUL1-202ENST00000409469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.26□□□□□ -0.45
CUL1-202ENST00000409469 SNRPA1P09661 255 aaKnown RBP12.25□□□□□ -0.45
CUL1-202ENST00000409469 RILPL2Q969X0 211 aa12.25□□□□□ -0.45
CUL1-202ENST00000409469 SUCLG2Q96I99 432 aa12.25□□□□□ -0.45
CUL1-202ENST00000409469 KIF2CQ99661 725 aa12.25□□□□□ -0.45
CUL1-202ENST00000409469 KAT6BQ8WYB5 2073 aa12.25□□□□□ -0.45
CUL1-202ENST00000409469 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
CUL1-202ENST00000409469 MX1P20591 662 aa12.25□□□□□ -0.45
CUL1-202ENST00000409469 PIP4K2BP78356 416 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms