RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
NIF3L1-202ENST00000409020 CYP19A1P11511 503 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-202ENST00000409020 RFC4P35249 363 aa12.89□□□□□ -0.35
NIF3L1-202ENST00000409020 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
NIF3L1-202ENST00000409020 KCNQ3O43525 872 aa12.88□□□□□ -0.35
NIF3L1-202ENST00000409020 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
NIF3L1-202ENST00000409020 SIPA1L3O60292 1781 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-202ENST00000409020 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
NIF3L1-202ENST00000409020 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
NIF3L1-202ENST00000409020 MCM10Q7L590 875 aa12.87□□□□□ -0.35
NIF3L1-202ENST00000409020 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
NIF3L1-202ENST00000409020 CCDC87Q9NVE4 849 aa12.87□□□□□ -0.35
NIF3L1-202ENST00000409020 TEFQ10587 303 aa12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 ZNF784Q8NCA9 323 aaPredicted RBP12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 SOS1Q07889 1333 aaPredicted RBP12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 NEFLP07196 543 aa12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 DDR1Q08345 913 aa12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
NIF3L1-202ENST00000409020 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
NIF3L1-202ENST00000409020 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
NIF3L1-202ENST00000409020 FCHSD2O94868 740 aa12.85□□□□□ -0.35
NIF3L1-202ENST00000409020 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
NIF3L1-202ENST00000409020 TSHZ2Q9NRE2 1034 aa12.85□□□□□ -0.35
NIF3L1-202ENST00000409020 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
NIF3L1-202ENST00000409020 CANXP27824 592 aaKnown RBP12.84□□□□□ -0.35
NIF3L1-202ENST00000409020 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
NIF3L1-202ENST00000409020 TTC5Q8N0Z6 440 aa12.84□□□□□ -0.35
NIF3L1-202ENST00000409020 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
NIF3L1-202ENST00000409020 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
NIF3L1-202ENST00000409020 BTBD11A6QL63 1104 aa12.83□□□□□ -0.35
NIF3L1-202ENST00000409020 VSIG10Q8N0Z9 540 aa12.83□□□□□ -0.35
NIF3L1-202ENST00000409020 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.35
NIF3L1-202ENST00000409020 COL15A1P39059 1388 aa12.83□□□□□ -0.36
NIF3L1-202ENST00000409020 CHD4Q14839 1912 aa12.83□□□□□ -0.36
NIF3L1-202ENST00000409020 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
NIF3L1-202ENST00000409020 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
NIF3L1-202ENST00000409020 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-202ENST00000409020 KIF13BQ9NQT8 1826 aa12.82□□□□□ -0.36
NIF3L1-202ENST00000409020 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-202ENST00000409020 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
NIF3L1-202ENST00000409020 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
NIF3L1-202ENST00000409020 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
NIF3L1-202ENST00000409020 A1BGP04217 495 aa12.81□□□□□ -0.36
NIF3L1-202ENST00000409020 DPEP1P16444 411 aa12.81□□□□□ -0.36
NIF3L1-202ENST00000409020 GRIN3BO60391 1043 aa12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 TM4SF1P30408 202 aa12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 FMNL2Q96PY5 1086 aa12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 ZPR1O75312 459 aa12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 STARD3NLO95772 234 aa12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 KCNA3P22001 575 aa12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 NFIXQ14938 502 aa12.8□□□□□ -0.36
NIF3L1-202ENST00000409020 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
NIF3L1-202ENST00000409020 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
NIF3L1-202ENST00000409020 CHRNA5P30532 468 aa12.78□□□□□ -0.36
NIF3L1-202ENST00000409020 RALBP1Q15311 655 aa12.78□□□□□ -0.36
NIF3L1-202ENST00000409020 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
NIF3L1-202ENST00000409020 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-202ENST00000409020 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
NIF3L1-202ENST00000409020 TGFB2P61812 414 aa12.77□□□□□ -0.36
NIF3L1-202ENST00000409020 BCS1LQ9Y276 419 aa12.77□□□□□ -0.36
NIF3L1-202ENST00000409020 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.37
NIF3L1-202ENST00000409020 PCNTO95613 3336 aa12.77□□□□□ -0.37
NIF3L1-202ENST00000409020 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
NIF3L1-202ENST00000409020 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
NIF3L1-202ENST00000409020 SCN7AQ01118 1682 aa12.76□□□□□ -0.37
NIF3L1-202ENST00000409020 HTATSF1O43719 755 aaKnown RBP12.76□□□□□ -0.37
NIF3L1-202ENST00000409020 TBC1D9BQ66K14 1250 aa12.76□□□□□ -0.37
NIF3L1-202ENST00000409020 ATP10DQ9P241 1426 aa12.76□□□□□ -0.37
NIF3L1-202ENST00000409020 BRCA1P38398 1863 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 IL6STP40189 918 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 CCDC146Q8IYE0 955 aa12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 TEX13AQ9BXU3 409 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 ADCY9O60503 1353 aa12.75□□□□□ -0.37
NIF3L1-202ENST00000409020 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
NIF3L1-202ENST00000409020 NBPF26B4DH59 902 aa12.74□□□□□ -0.37
NIF3L1-202ENST00000409020 CAMTA2O94983 1202 aa12.74□□□□□ -0.37
NIF3L1-202ENST00000409020 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
NIF3L1-202ENST00000409020 NBPF10Q6P3W6 841 aaKnown RBP12.74□□□□□ -0.37
NIF3L1-202ENST00000409020 NBPF15Q8N660 670 aa12.74□□□□□ -0.37
NIF3L1-202ENST00000409020 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
NIF3L1-202ENST00000409020 MAPK8IP3Q9UPT6 1336 aa12.74□□□□□ -0.37
NIF3L1-202ENST00000409020 SERPINB2P05120 415 aa12.73□□□□□ -0.37
NIF3L1-202ENST00000409020 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
NIF3L1-202ENST00000409020 KDM3BQ7LBC6 1761 aa12.73□□□□□ -0.37
NIF3L1-202ENST00000409020 A0A087WZG4 1122 aa12.73□□□□□ -0.37
NIF3L1-202ENST00000409020 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-202ENST00000409020 NEFMP07197 916 aa12.71□□□□□ -0.37
NIF3L1-202ENST00000409020 RIPK4P57078 832 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms