RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
APOBEC3B-204ENST00000407298 HTRA3P83110 453 aa16.72■□□□□ 0.27
APOBEC3B-204ENST00000407298 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
APOBEC3B-204ENST00000407298 TTLL6Q8N841 843 aa16.72■□□□□ 0.27
APOBEC3B-204ENST00000407298 GLTPD2A6NH11 291 aa16.71■□□□□ 0.27
APOBEC3B-204ENST00000407298 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
APOBEC3B-204ENST00000407298 IL13P35225 146 aa16.71■□□□□ 0.27
APOBEC3B-204ENST00000407298 TNRC6CQ9HCJ0 1690 aaKnown RBP16.71■□□□□ 0.27
APOBEC3B-204ENST00000407298 NFIXQ14938 502 aa16.7■□□□□ 0.26
APOBEC3B-204ENST00000407298 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
APOBEC3B-204ENST00000407298 H0YIN7 160 aa16.69■□□□□ 0.26
APOBEC3B-204ENST00000407298 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
APOBEC3B-204ENST00000407298 SERPINB2P05120 415 aa16.69■□□□□ 0.26
APOBEC3B-204ENST00000407298 CCER1Q8TC90 406 aaPredicted RBP16.69■□□□□ 0.26
APOBEC3B-204ENST00000407298 PDZRN3Q9UPQ7 1066 aa16.69■□□□□ 0.26
APOBEC3B-204ENST00000407298 TJP1Q07157 1748 aa16.69■□□□□ 0.26
APOBEC3B-204ENST00000407298 SBF1O95248 1867 aa16.69■□□□□ 0.26
APOBEC3B-204ENST00000407298 COL15A1P39059 1388 aa16.68■□□□□ 0.26
APOBEC3B-204ENST00000407298 A0A087WZG4 1122 aa16.68■□□□□ 0.26
APOBEC3B-204ENST00000407298 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
APOBEC3B-204ENST00000407298 RASSF7Q02833 373 aa16.68■□□□□ 0.26
APOBEC3B-204ENST00000407298 COL13A1Q5TAT6 717 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3B-204ENST00000407298 DPY19L2Q6NUT2 758 aa16.68■□□□□ 0.26
APOBEC3B-204ENST00000407298 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
APOBEC3B-204ENST00000407298 SCN11AQ9UI33 1791 aa16.68■□□□□ 0.26
APOBEC3B-204ENST00000407298 STARD3NLO95772 234 aa16.67■□□□□ 0.26
APOBEC3B-204ENST00000407298 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
APOBEC3B-204ENST00000407298 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
APOBEC3B-204ENST00000407298 PCNTO95613 3336 aa16.67■□□□□ 0.26
APOBEC3B-204ENST00000407298 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
APOBEC3B-204ENST00000407298 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
APOBEC3B-204ENST00000407298 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
APOBEC3B-204ENST00000407298 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
APOBEC3B-204ENST00000407298 PDE6BP35913 854 aa16.64■□□□□ 0.25
APOBEC3B-204ENST00000407298 TEX13AQ9BXU3 409 aaPredicted RBP16.64■□□□□ 0.25
APOBEC3B-204ENST00000407298 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
APOBEC3B-204ENST00000407298 NPM2Q86SE8 214 aaKnown RBP16.63■□□□□ 0.25
APOBEC3B-204ENST00000407298 BCL2L12Q9HB09 334 aa16.63■□□□□ 0.25
APOBEC3B-204ENST00000407298 MRC1P22897 1456 aa16.62■□□□□ 0.25
APOBEC3B-204ENST00000407298 AFDNP55196 1824 aaKnown RBP16.62■□□□□ 0.25
APOBEC3B-204ENST00000407298 HMOX1P09601 288 aa16.62■□□□□ 0.25
APOBEC3B-204ENST00000407298 PRELPP51888 382 aa16.62■□□□□ 0.25
APOBEC3B-204ENST00000407298 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
APOBEC3B-204ENST00000407298 BRIP1Q9BX63 1249 aa16.62■□□□□ 0.25
APOBEC3B-204ENST00000407298 NRXN2Q9P2S2 1712 aa16.62■□□□□ 0.25
APOBEC3B-204ENST00000407298 EIF5P55010 431 aaKnown RBP16.61■□□□□ 0.25
APOBEC3B-204ENST00000407298 MTHFSDQ2M296 383 aaKnown RBP16.61■□□□□ 0.25
APOBEC3B-204ENST00000407298 BICDL1Q6ZP65 573 aa16.61■□□□□ 0.25
APOBEC3B-204ENST00000407298 NFKBIEO00221 500 aa16.6■□□□□ 0.25
APOBEC3B-204ENST00000407298 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
APOBEC3B-204ENST00000407298 CAPN15O75808 1086 aa16.6■□□□□ 0.25
APOBEC3B-204ENST00000407298 ERFEQ4G0M1 354 aa16.6■□□□□ 0.25
APOBEC3B-204ENST00000407298 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
APOBEC3B-204ENST00000407298 NPHP1O15259 732 aa16.59■□□□□ 0.25
APOBEC3B-204ENST00000407298 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
APOBEC3B-204ENST00000407298 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
APOBEC3B-204ENST00000407298 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
APOBEC3B-204ENST00000407298 C21orf2O43822 256 aa16.58■□□□□ 0.24
APOBEC3B-204ENST00000407298 TEFQ10587 303 aa16.58■□□□□ 0.24
APOBEC3B-204ENST00000407298 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
APOBEC3B-204ENST00000407298 TBC1D9BQ66K14 1250 aa16.58■□□□□ 0.24
APOBEC3B-204ENST00000407298 CNKSR1Q969H4 720 aa16.58■□□□□ 0.24
APOBEC3B-204ENST00000407298 CARMIL3Q8ND23 1372 aa16.57■□□□□ 0.24
APOBEC3B-204ENST00000407298 LTBP3Q9NS15 1303 aa16.57■□□□□ 0.24
APOBEC3B-204ENST00000407298 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
APOBEC3B-204ENST00000407298 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
APOBEC3B-204ENST00000407298 POTECB2RU33 542 aa16.56■□□□□ 0.24
APOBEC3B-204ENST00000407298 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
APOBEC3B-204ENST00000407298 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
APOBEC3B-204ENST00000407298 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
APOBEC3B-204ENST00000407298 TAOK3Q9H2K8 898 aa16.56■□□□□ 0.24
APOBEC3B-204ENST00000407298 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
APOBEC3B-204ENST00000407298 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
APOBEC3B-204ENST00000407298 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 ST5P78524 1137 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 STYK1Q6J9G0 422 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 TIAM2Q8IVF5 1701 aa16.55■□□□□ 0.24
APOBEC3B-204ENST00000407298 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
APOBEC3B-204ENST00000407298 ZNF496Q96IT1 587 aaPredicted RBP16.54■□□□□ 0.24
APOBEC3B-204ENST00000407298 MASTLQ96GX5 879 aa16.53■□□□□ 0.24
APOBEC3B-204ENST00000407298 VIRMAQ69YN4 1812 aaKnown RBP16.53■□□□□ 0.24
APOBEC3B-204ENST00000407298 UBR2Q8IWV8 1755 aa16.52■□□□□ 0.24
APOBEC3B-204ENST00000407298 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
APOBEC3B-204ENST00000407298 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
APOBEC3B-204ENST00000407298 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
APOBEC3B-204ENST00000407298 SRGNP10124 158 aa16.51■□□□□ 0.23
APOBEC3B-204ENST00000407298 PRPF40BQ6NWY9 871 aaKnown RBP16.51■□□□□ 0.23
APOBEC3B-204ENST00000407298 IL17REQ8NFR9 667 aa16.51■□□□□ 0.23
APOBEC3B-204ENST00000407298 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
APOBEC3B-204ENST00000407298 CAMTA2O94983 1202 aa16.5■□□□□ 0.23
APOBEC3B-204ENST00000407298 CC2D1BQ5T0F9 858 aaKnown RBP16.5■□□□□ 0.23
APOBEC3B-204ENST00000407298 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
APOBEC3B-204ENST00000407298 LDHDQ86WU2 507 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms