RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 MRC1P22897 1456 aa16.7■□□□□ 0.26
NDEL1-203ENST00000402554 CASZ1Q86V15 1759 aa16.7■□□□□ 0.26
NDEL1-203ENST00000402554 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
NDEL1-203ENST00000402554 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
NDEL1-203ENST00000402554 ATF7IPQ6VMQ6 1270 aa16.69■□□□□ 0.26
NDEL1-203ENST00000402554 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
NDEL1-203ENST00000402554 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
NDEL1-203ENST00000402554 ATG3Q9NT62 314 aa16.69■□□□□ 0.26
NDEL1-203ENST00000402554 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
NDEL1-203ENST00000402554 SIPA1L3O60292 1781 aaPredicted RBP16.69■□□□□ 0.26
NDEL1-203ENST00000402554 NFATC2IPQ8NCF5 419 aa16.69■□□□□ 0.26
NDEL1-203ENST00000402554 PDGFDQ9GZP0 370 aaPredicted RBP16.69■□□□□ 0.26
NDEL1-203ENST00000402554 ELL2O00472 640 aaPredicted RBP16.68■□□□□ 0.26
NDEL1-203ENST00000402554 TRIM27P14373 513 aa16.68■□□□□ 0.26
NDEL1-203ENST00000402554 MVPQ14764 893 aaKnown RBP16.68■□□□□ 0.26
NDEL1-203ENST00000402554 SLC27A3Q5K4L6 730 aa16.68■□□□□ 0.26
NDEL1-203ENST00000402554 STK32BQ9NY57 414 aa16.68■□□□□ 0.26
NDEL1-203ENST00000402554 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
NDEL1-203ENST00000402554 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
NDEL1-203ENST00000402554 SLC15A2Q16348 729 aa16.67■□□□□ 0.26
NDEL1-203ENST00000402554 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
NDEL1-203ENST00000402554 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
NDEL1-203ENST00000402554 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
NDEL1-203ENST00000402554 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
NDEL1-203ENST00000402554 TJP1Q07157 1748 aa16.65■□□□□ 0.26
NDEL1-203ENST00000402554 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
NDEL1-203ENST00000402554 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
NDEL1-203ENST00000402554 SIK1P57059 783 aa16.65■□□□□ 0.26
NDEL1-203ENST00000402554 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
NDEL1-203ENST00000402554 RBM42Q9BTD8 480 aaKnown RBP16.65■□□□□ 0.26
NDEL1-203ENST00000402554 TSPYL4Q9UJ04 414 aa16.65■□□□□ 0.26
NDEL1-203ENST00000402554 COL5A3P25940 1745 aaPredicted RBP16.64■□□□□ 0.25
NDEL1-203ENST00000402554 SLC39A6Q13433 755 aa16.64■□□□□ 0.25
NDEL1-203ENST00000402554 ITPK1Q13572 414 aa16.64■□□□□ 0.25
NDEL1-203ENST00000402554 ARHGAP45Q92619 1136 aa16.64■□□□□ 0.25
NDEL1-203ENST00000402554 SLC4A9Q96Q91 983 aa16.64■□□□□ 0.25
NDEL1-203ENST00000402554 LINC00116Q8NCU8 138 aa16.63■□□□□ 0.25
NDEL1-203ENST00000402554 MIS18AQ9NYP9 233 aa16.63■□□□□ 0.25
NDEL1-203ENST00000402554 UBR2Q8IWV8 1755 aa16.63■□□□□ 0.25
NDEL1-203ENST00000402554 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
NDEL1-203ENST00000402554 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
NDEL1-203ENST00000402554 RBM19Q9Y4C8 960 aaKnown RBP16.63■□□□□ 0.25
NDEL1-203ENST00000402554 LRP5O75197 1615 aa16.63■□□□□ 0.25
NDEL1-203ENST00000402554 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
NDEL1-203ENST00000402554 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
NDEL1-203ENST00000402554 ATP6V1AP38606 617 aa16.62■□□□□ 0.25
NDEL1-203ENST00000402554 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
NDEL1-203ENST00000402554 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
NDEL1-203ENST00000402554 BABAM1Q9NWV8 329 aa16.62■□□□□ 0.25
NDEL1-203ENST00000402554 UBR3Q6ZT12 1888 aa16.62■□□□□ 0.25
NDEL1-203ENST00000402554 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
NDEL1-203ENST00000402554 CEMIPQ8WUJ3 1361 aa16.61■□□□□ 0.25
NDEL1-203ENST00000402554 KRT24Q2M2I5 525 aa16.61■□□□□ 0.25
NDEL1-203ENST00000402554 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
NDEL1-203ENST00000402554 TEFQ10587 303 aa16.61■□□□□ 0.25
NDEL1-203ENST00000402554 AMIGO3Q86WK7 504 aa16.61■□□□□ 0.25
NDEL1-203ENST00000402554 TFCP2L1Q9NZI6 479 aa16.61■□□□□ 0.25
NDEL1-203ENST00000402554 PNPLA7Q6ZV29 1317 aa16.6■□□□□ 0.25
NDEL1-203ENST00000402554 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
NDEL1-203ENST00000402554 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
NDEL1-203ENST00000402554 IGHDP01880 384 aa16.59■□□□□ 0.25
NDEL1-203ENST00000402554 PCDHB15Q9Y5E8 787 aa16.59■□□□□ 0.25
NDEL1-203ENST00000402554 CICQ96RK0 1608 aaPredicted RBP16.59■□□□□ 0.25
NDEL1-203ENST00000402554 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
NDEL1-203ENST00000402554 MYH14Q7Z406 1995 aaKnown RBP16.58■□□□□ 0.24
NDEL1-203ENST00000402554 KCNQ3O43525 872 aa16.57■□□□□ 0.24
NDEL1-203ENST00000402554 PHF14O94880 888 aa16.57■□□□□ 0.24
NDEL1-203ENST00000402554 AK7Q96M32 723 aa16.57■□□□□ 0.24
NDEL1-203ENST00000402554 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
NDEL1-203ENST00000402554 ABCC4O15439 1325 aa16.56■□□□□ 0.24
NDEL1-203ENST00000402554 CHMP4BQ9H444 224 aaKnown RBP16.56■□□□□ 0.24
NDEL1-203ENST00000402554 RWDD1Q9H446 243 aaPredicted RBP16.56■□□□□ 0.24
NDEL1-203ENST00000402554 SOS1Q07889 1333 aaPredicted RBP16.55■□□□□ 0.24
NDEL1-203ENST00000402554 KDM3BQ7LBC6 1761 aa16.55■□□□□ 0.24
NDEL1-203ENST00000402554 MSH5O43196 834 aa16.55■□□□□ 0.24
NDEL1-203ENST00000402554 COL23A1Q86Y22 540 aaPredicted RBP16.55■□□□□ 0.24
NDEL1-203ENST00000402554 BTBD11A6QL63 1104 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 GNPATO15228 680 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 TTC5Q8N0Z6 440 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 ZBTB40Q9NUA8 1239 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 C4AP0C0L4 1744 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 PTPRCP08575 1304 aa16.54■□□□□ 0.24
NDEL1-203ENST00000402554 ZNF496Q96IT1 587 aaPredicted RBP16.53■□□□□ 0.24
NDEL1-203ENST00000402554 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
NDEL1-203ENST00000402554 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
NDEL1-203ENST00000402554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.23
NDEL1-203ENST00000402554 MSL1Q68DK7 614 aa16.52■□□□□ 0.23
NDEL1-203ENST00000402554 STK31Q9BXU1 1019 aa16.52■□□□□ 0.23
NDEL1-203ENST00000402554 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
NDEL1-203ENST00000402554 CRKLP46109 303 aaKnown RBP16.51■□□□□ 0.23
NDEL1-203ENST00000402554 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
NDEL1-203ENST00000402554 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
NDEL1-203ENST00000402554 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
NDEL1-203ENST00000402554 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
NDEL1-203ENST00000402554 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
NDEL1-203ENST00000402554 MTFR1LQ9H019 292 aa16.5■□□□□ 0.23
NDEL1-203ENST00000402554 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms