RNA–Protein interactions for RNA: ENST00000401813.7

FAAP20-205, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-205ENST00000401813 SOX12O15370 315 aa23.04■■□□□ 1.28
FAAP20-205ENST00000401813 SMAP1Q8IYB5 467 aaPredicted RBP23.04■■□□□ 1.28
FAAP20-205ENST00000401813 NUTM1Q86Y26 1132 aa23.03■■□□□ 1.28
FAAP20-205ENST00000401813 C17orf53Q8N3J3 647 aaPredicted RBP23.03■■□□□ 1.28
FAAP20-205ENST00000401813 UBE2HP62256 183 aa23.03■■□□□ 1.28
FAAP20-205ENST00000401813 TECPR2O15040 1411 aa23.02■■□□□ 1.28
FAAP20-205ENST00000401813 ACEP12821 1306 aa23.02■■□□□ 1.28
FAAP20-205ENST00000401813 MAP4K4O95819 1239 aaPredicted RBP23.02■■□□□ 1.28
FAAP20-205ENST00000401813 NECTIN2Q92692 538 aa23.02■■□□□ 1.28
FAAP20-205ENST00000401813 TTC14Q96N46 770 aa23.02■■□□□ 1.28
FAAP20-205ENST00000401813 CCDC94Q9BW85 323 aaPredicted RBP23.02■■□□□ 1.28
FAAP20-205ENST00000401813 SNX14Q9Y5W7 946 aa23.02■■□□□ 1.28
FAAP20-205ENST00000401813 CCDC30Q5VVM6 783 aa23.02■■□□□ 1.27
FAAP20-205ENST00000401813 RAD50Q92878 1312 aa23.01■■□□□ 1.27
FAAP20-205ENST00000401813 HMGN5P82970 282 aaKnown RBP23.01■■□□□ 1.27
FAAP20-205ENST00000401813 TSC1Q92574 1164 aa23.01■■□□□ 1.27
FAAP20-205ENST00000401813 STX6O43752 255 aa23.01■■□□□ 1.27
FAAP20-205ENST00000401813 SYT1P21579 422 aa23.01■■□□□ 1.27
FAAP20-205ENST00000401813 AK2P54819 239 aa23.01■■□□□ 1.27
FAAP20-205ENST00000401813 KDM4AO75164 1064 aa23■■□□□ 1.27
FAAP20-205ENST00000401813 LARP6Q9BRS8 491 aaKnown RBP23■■□□□ 1.27
FAAP20-205ENST00000401813 FAM208AQ9UK61 1670 aaKnown RBP23■■□□□ 1.27
FAAP20-205ENST00000401813 NALCNQ8IZF0 1738 aa23■■□□□ 1.27
FAAP20-205ENST00000401813 SGSM2O43147 1006 aa23■■□□□ 1.27
FAAP20-205ENST00000401813 GTF2F1P35269 517 aaKnown RBP eCLIP23■■□□□ 1.27
FAAP20-205ENST00000401813 ZNF710Q8N1W2 664 aa23■■□□□ 1.27
FAAP20-205ENST00000401813 USP44Q9H0E7 712 aa23■■□□□ 1.27
FAAP20-205ENST00000401813 SPTLC3Q9NUV7 552 aa23■■□□□ 1.27
FAAP20-205ENST00000401813 USP31Q70CQ4 1352 aa22.99■■□□□ 1.27
FAAP20-205ENST00000401813 SOS1Q07889 1333 aaPredicted RBP22.99■■□□□ 1.27
FAAP20-205ENST00000401813 F13A1P00488 732 aa22.99■■□□□ 1.27
FAAP20-205ENST00000401813 RUFY3Q7L099 469 aa22.99■■□□□ 1.27
FAAP20-205ENST00000401813 FIBPO43427 364 aa22.98■■□□□ 1.27
FAAP20-205ENST00000401813 RASEFQ8IZ41 740 aa22.98■■□□□ 1.27
FAAP20-205ENST00000401813 PI4K2BQ8TCG2 481 aa22.98■■□□□ 1.27
FAAP20-205ENST00000401813 SSH3Q8TE77 659 aa22.98■■□□□ 1.27
FAAP20-205ENST00000401813 LSG1Q9H089 658 aaKnown RBP22.98■■□□□ 1.27
FAAP20-205ENST00000401813 LIMCH1Q9UPQ0 1083 aa22.98■■□□□ 1.27
FAAP20-205ENST00000401813 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.98■■□□□ 1.27
FAAP20-205ENST00000401813 UBTFL1P0CB47 393 aaPredicted RBP22.98■■□□□ 1.27
FAAP20-205ENST00000401813 FUCA2Q9BTY2 467 aa22.98■■□□□ 1.27
FAAP20-205ENST00000401813 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
FAAP20-205ENST00000401813 NUTM2FA1L443 756 aa22.97■■□□□ 1.27
FAAP20-205ENST00000401813 SMC3Q9UQE7 1217 aa22.97■■□□□ 1.27
FAAP20-205ENST00000401813 USP6P35125 1406 aa22.97■■□□□ 1.27
FAAP20-205ENST00000401813 GIMAP6Q6P9H5 292 aa22.96■■□□□ 1.27
FAAP20-205ENST00000401813 KDRP35968 1356 aa22.96■■□□□ 1.27
FAAP20-205ENST00000401813 RAB11FIP3O75154 756 aa22.96■■□□□ 1.27
FAAP20-205ENST00000401813 PLEKHG3A1L390 1219 aa22.95■■□□□ 1.26
FAAP20-205ENST00000401813 SURF6O75683 361 aaKnown RBP22.95■■□□□ 1.26
FAAP20-205ENST00000401813 PRDM10Q9NQV6 1147 aa22.95■■□□□ 1.26
FAAP20-205ENST00000401813 ATP6V1DQ9Y5K8 247 aa22.95■■□□□ 1.26
FAAP20-205ENST00000401813 ROBO2Q9HCK4 1378 aa22.95■■□□□ 1.26
FAAP20-205ENST00000401813 AP5Z1O43299 807 aa22.94■■□□□ 1.26
FAAP20-205ENST00000401813 PLCB2Q00722 1185 aa22.94■■□□□ 1.26
FAAP20-205ENST00000401813 PPP1R42Q7Z4L9 355 aa22.94■■□□□ 1.26
FAAP20-205ENST00000401813 RHPN1Q8TCX5 695 aa22.94■■□□□ 1.26
FAAP20-205ENST00000401813 FMN2Q9NZ56 1722 aa22.94■■□□□ 1.26
FAAP20-205ENST00000401813 N4BP2Q86UW6 1770 aaPredicted RBP22.94■■□□□ 1.26
FAAP20-205ENST00000401813 EYA1Q99502 592 aa22.93■■□□□ 1.26
FAAP20-205ENST00000401813 PXDNLA1KZ92 1463 aa22.93■■□□□ 1.26
FAAP20-205ENST00000401813 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
FAAP20-205ENST00000401813 TOPAZ1Q8N9V7 1692 aa22.93■■□□□ 1.26
FAAP20-205ENST00000401813 LARGE1O95461 756 aa22.93■■□□□ 1.26
FAAP20-205ENST00000401813 CPA1P15085 419 aa22.93■■□□□ 1.26
FAAP20-205ENST00000401813 POLA2Q14181 598 aa22.92■■□□□ 1.26
FAAP20-205ENST00000401813 CNTROBQ8N137 903 aa22.92■■□□□ 1.26
FAAP20-205ENST00000401813 KIF3AQ9Y496 699 aa22.92■■□□□ 1.26
FAAP20-205ENST00000401813 FAM177BA6PVY3 158 aa22.92■■□□□ 1.26
FAAP20-205ENST00000401813 LRRC37A3O60309 1634 aa22.92■■□□□ 1.26
FAAP20-205ENST00000401813 IGSF1Q8N6C5 1336 aa22.91■■□□□ 1.26
FAAP20-205ENST00000401813 HTATSF1O43719 755 aaKnown RBP22.91■■□□□ 1.26
FAAP20-205ENST00000401813 DNM1Q05193 864 aaKnown RBP22.91■■□□□ 1.26
FAAP20-205ENST00000401813 SPG7Q9UQ90 795 aa22.91■■□□□ 1.26
FAAP20-205ENST00000401813 FLT4P35916 1363 aa22.91■■□□□ 1.26
FAAP20-205ENST00000401813 CWC27Q6UX04 472 aaKnown RBP22.91■■□□□ 1.26
FAAP20-205ENST00000401813 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
FAAP20-205ENST00000401813 KCNF1Q9H3M0 494 aa22.91■■□□□ 1.26
FAAP20-205ENST00000401813 SBNO1A3KN83 1393 aa22.91■■□□□ 1.26
FAAP20-205ENST00000401813 CASTP20810 708 aaKnown RBP22.9■■□□□ 1.26
FAAP20-205ENST00000401813 GJB2P29033 226 aa22.9■■□□□ 1.26
FAAP20-205ENST00000401813 KIAA1524Q8TCG1 905 aa22.9■■□□□ 1.26
FAAP20-205ENST00000401813 HYPKQ9NX55 129 aa22.9■■□□□ 1.26
FAAP20-205ENST00000401813 MTMR6Q9Y217 621 aa22.9■■□□□ 1.26
FAAP20-205ENST00000401813 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.9■■□□□ 1.26
FAAP20-205ENST00000401813 DTNBO60941 627 aa22.9■■□□□ 1.26
FAAP20-205ENST00000401813 CCDC83Q8IWF9 413 aa22.9■■□□□ 1.26
FAAP20-205ENST00000401813 PYCARDQ9ULZ3 195 aa22.9■■□□□ 1.26
FAAP20-205ENST00000401813 TNRQ92752 1358 aa22.9■■□□□ 1.26
FAAP20-205ENST00000401813 GNAT3A8MTJ3 354 aa22.89■■□□□ 1.26
FAAP20-205ENST00000401813 KIF1BPQ96EK5 621 aa22.89■■□□□ 1.25
FAAP20-205ENST00000401813 HDGFP51858 240 aaKnown RBP22.88■■□□□ 1.25
FAAP20-205ENST00000401813 PHAXQ9H814 394 aaKnown RBP22.88■■□□□ 1.25
FAAP20-205ENST00000401813 BCL2L12Q9HB09 334 aa22.88■■□□□ 1.25
FAAP20-205ENST00000401813 CACNA1FO60840 1977 aa22.88■■□□□ 1.25
FAAP20-205ENST00000401813 SRGAP3O43295 1099 aa22.88■■□□□ 1.25
FAAP20-205ENST00000401813 AMPHP49418 695 aa22.87■■□□□ 1.25
FAAP20-205ENST00000401813 TPM3P06753 285 aa22.86■■□□□ 1.25
FAAP20-205ENST00000401813 SPC24Q8NBT2 197 aa22.86■■□□□ 1.25
FAAP20-205ENST00000401813 IL17REQ8NFR9 667 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms