RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 HMOX1P09601 288 aa19.82■□□□□ 0.76
VAMP1-203ENST00000400911 RASSF7Q02833 373 aa19.82■□□□□ 0.76
VAMP1-203ENST00000400911 ZBTB1Q9Y2K1 713 aa19.81■□□□□ 0.76
VAMP1-203ENST00000400911 SERPINB2P05120 415 aa19.8■□□□□ 0.76
VAMP1-203ENST00000400911 MTHFSDQ2M296 383 aaKnown RBP19.8■□□□□ 0.76
VAMP1-203ENST00000400911 AMER1Q5JTC6 1135 aaPredicted RBP19.8■□□□□ 0.76
VAMP1-203ENST00000400911 BCL2L12Q9HB09 334 aa19.8■□□□□ 0.76
VAMP1-203ENST00000400911 LMNB1P20700 586 aa19.79■□□□□ 0.76
VAMP1-203ENST00000400911 PRELPP51888 382 aa19.79■□□□□ 0.76
VAMP1-203ENST00000400911 JMYQ8N9B5 988 aa19.79■□□□□ 0.76
VAMP1-203ENST00000400911 SMC1BQ8NDV3 1235 aa19.79■□□□□ 0.76
VAMP1-203ENST00000400911 TTLL6Q8N841 843 aa19.78■□□□□ 0.76
VAMP1-203ENST00000400911 COL15A1P39059 1388 aa19.78■□□□□ 0.76
VAMP1-203ENST00000400911 TJP1Q07157 1748 aa19.77■□□□□ 0.76
VAMP1-203ENST00000400911 CANXP27824 592 aaKnown RBP19.77■□□□□ 0.76
VAMP1-203ENST00000400911 COL13A1Q5TAT6 717 aaPredicted RBP19.77■□□□□ 0.76
VAMP1-203ENST00000400911 C2CD5Q86YS7 1000 aa19.77■□□□□ 0.76
VAMP1-203ENST00000400911 VSIG10Q8N0Z9 540 aa19.77■□□□□ 0.76
VAMP1-203ENST00000400911 BRCA1P38398 1863 aaKnown RBP19.77■□□□□ 0.76
VAMP1-203ENST00000400911 GLTPD2A6NH11 291 aa19.76■□□□□ 0.75
VAMP1-203ENST00000400911 BICDL1Q6ZP65 573 aa19.76■□□□□ 0.75
VAMP1-203ENST00000400911 ZC3H4Q9UPT8 1303 aaKnown RBP19.76■□□□□ 0.75
VAMP1-203ENST00000400911 H0YIN7 160 aa19.75■□□□□ 0.75
VAMP1-203ENST00000400911 VEGFAP15692 232 aaPredicted RBP19.75■□□□□ 0.75
VAMP1-203ENST00000400911 STARD3NLO95772 234 aa19.74■□□□□ 0.75
VAMP1-203ENST00000400911 ADAMTS7Q9UKP4 1686 aa19.74■□□□□ 0.75
VAMP1-203ENST00000400911 NFKBIEO00221 500 aa19.73■□□□□ 0.75
VAMP1-203ENST00000400911 DIAPH1O60610 1272 aaKnown RBP19.73■□□□□ 0.75
VAMP1-203ENST00000400911 EIF5P55010 431 aaKnown RBP19.73■□□□□ 0.75
VAMP1-203ENST00000400911 ARFGEF1Q9Y6D6 1849 aa19.73■□□□□ 0.75
VAMP1-203ENST00000400911 MRC1P22897 1456 aa19.73■□□□□ 0.75
VAMP1-203ENST00000400911 CARMIL3Q8ND23 1372 aa19.72■□□□□ 0.75
VAMP1-203ENST00000400911 TTC5Q8N0Z6 440 aa19.72■□□□□ 0.75
VAMP1-203ENST00000400911 A0A087WZG4 1122 aa19.71■□□□□ 0.75
VAMP1-203ENST00000400911 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
VAMP1-203ENST00000400911 TBC1D9BQ66K14 1250 aa19.71■□□□□ 0.75
VAMP1-203ENST00000400911 ZNF622Q969S3 477 aaKnown RBP eCLIP19.71■□□□□ 0.75
VAMP1-203ENST00000400911 WDR90Q96KV7 1748 aa19.71■□□□□ 0.75
VAMP1-203ENST00000400911 CCDC24Q8N4L8 307 aa19.7■□□□□ 0.74
VAMP1-203ENST00000400911 ZNF496Q96IT1 587 aaPredicted RBP19.7■□□□□ 0.74
VAMP1-203ENST00000400911 ZNF219Q9P2Y4 722 aaPredicted RBP19.69■□□□□ 0.74
VAMP1-203ENST00000400911 TBC1D2BQ9UPU7 963 aa19.69■□□□□ 0.74
VAMP1-203ENST00000400911 ZNF330Q9Y3S2 320 aaPredicted RBP19.69■□□□□ 0.74
VAMP1-203ENST00000400911 KIF7Q2M1P5 1343 aa19.69■□□□□ 0.74
VAMP1-203ENST00000400911 SCN11AQ9UI33 1791 aa19.68■□□□□ 0.74
VAMP1-203ENST00000400911 POTECB2RU33 542 aa19.68■□□□□ 0.74
VAMP1-203ENST00000400911 PER1O15534 1290 aaPredicted RBP19.68■□□□□ 0.74
VAMP1-203ENST00000400911 C21orf2O43822 256 aa19.68■□□□□ 0.74
VAMP1-203ENST00000400911 IL17REQ8NFR9 667 aa19.68■□□□□ 0.74
VAMP1-203ENST00000400911 BRIP1Q9BX63 1249 aa19.68■□□□□ 0.74
VAMP1-203ENST00000400911 CAPN15O75808 1086 aa19.67■□□□□ 0.74
VAMP1-203ENST00000400911 PDE6BP35913 854 aa19.67■□□□□ 0.74
VAMP1-203ENST00000400911 DPY19L2Q6NUT2 758 aa19.67■□□□□ 0.74
VAMP1-203ENST00000400911 ZNF790Q6PG37 636 aa19.67■□□□□ 0.74
VAMP1-203ENST00000400911 TEFQ10587 303 aa19.66■□□□□ 0.74
VAMP1-203ENST00000400911 ERFEQ4G0M1 354 aa19.66■□□□□ 0.74
VAMP1-203ENST00000400911 PRR5LQ6MZQ0 368 aa19.66■□□□□ 0.74
VAMP1-203ENST00000400911 TNS4Q8IZW8 715 aa19.66■□□□□ 0.74
VAMP1-203ENST00000400911 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
VAMP1-203ENST00000400911 TEX13AQ9BXU3 409 aaPredicted RBP19.66■□□□□ 0.74
VAMP1-203ENST00000400911 GNAT3A8MTJ3 354 aa19.65■□□□□ 0.74
VAMP1-203ENST00000400911 U2SURPO15042 1029 aaKnown RBP19.65■□□□□ 0.74
VAMP1-203ENST00000400911 A1BGP04217 495 aa19.65■□□□□ 0.74
VAMP1-203ENST00000400911 CNGB1Q14028 1251 aaPredicted RBP19.65■□□□□ 0.74
VAMP1-203ENST00000400911 PDZRN3Q9UPQ7 1066 aa19.65■□□□□ 0.74
VAMP1-203ENST00000400911 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
VAMP1-203ENST00000400911 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.73
VAMP1-203ENST00000400911 TNRC6CQ9HCJ0 1690 aaKnown RBP19.64■□□□□ 0.73
VAMP1-203ENST00000400911 NRXN2Q9P2S2 1712 aa19.63■□□□□ 0.73
VAMP1-203ENST00000400911 GAS2L2Q8NHY3 880 aa19.63■□□□□ 0.73
VAMP1-203ENST00000400911 SETDB2Q96T68 719 aa19.63■□□□□ 0.73
VAMP1-203ENST00000400911 CAMTA2O94983 1202 aa19.62■□□□□ 0.73
VAMP1-203ENST00000400911 HSPA1AP0DMV8 641 aaKnown RBP19.62■□□□□ 0.73
VAMP1-203ENST00000400911 HSPA1BP0DMV9 641 aaKnown RBP19.62■□□□□ 0.73
VAMP1-203ENST00000400911 FMNL2Q96PY5 1086 aa19.62■□□□□ 0.73
VAMP1-203ENST00000400911 SBF1O95248 1867 aa19.61■□□□□ 0.73
VAMP1-203ENST00000400911 NPHP1O15259 732 aa19.61■□□□□ 0.73
VAMP1-203ENST00000400911 KCNQ3O43525 872 aa19.61■□□□□ 0.73
VAMP1-203ENST00000400911 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
VAMP1-203ENST00000400911 CNBD1Q8NA66 436 aa19.61■□□□□ 0.73
VAMP1-203ENST00000400911 TAOK3Q9H2K8 898 aa19.6■□□□□ 0.73
VAMP1-203ENST00000400911 AFDNP55196 1824 aaKnown RBP19.6■□□□□ 0.73
VAMP1-203ENST00000400911 BTBD11A6QL63 1104 aa19.59■□□□□ 0.73
VAMP1-203ENST00000400911 DDNO94850 711 aaPredicted RBP19.59■□□□□ 0.73
VAMP1-203ENST00000400911 SRGNP10124 158 aa19.59■□□□□ 0.73
VAMP1-203ENST00000400911 ST5P78524 1137 aa19.59■□□□□ 0.73
VAMP1-203ENST00000400911 CNKSR1Q969H4 720 aa19.59■□□□□ 0.73
VAMP1-203ENST00000400911 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.72
VAMP1-203ENST00000400911 STYK1Q6J9G0 422 aa19.58■□□□□ 0.72
VAMP1-203ENST00000400911 PRPF40BQ6NWY9 871 aaKnown RBP19.58■□□□□ 0.72
VAMP1-203ENST00000400911 DZIP3Q86Y13 1208 aaKnown RBP19.58■□□□□ 0.72
VAMP1-203ENST00000400911 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.72
VAMP1-203ENST00000400911 LTBP3Q9NS15 1303 aa19.57■□□□□ 0.72
VAMP1-203ENST00000400911 POTEIP0CG38 1075 aa19.57■□□□□ 0.72
VAMP1-203ENST00000400911 POTEJP0CG39 1038 aa19.57■□□□□ 0.72
VAMP1-203ENST00000400911 CHADLQ6NUI6 762 aa19.57■□□□□ 0.72
VAMP1-203ENST00000400911 MASTLQ96GX5 879 aa19.57■□□□□ 0.72
VAMP1-203ENST00000400911 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
VAMP1-203ENST00000400911 CEMIPQ8WUJ3 1361 aa19.56■□□□□ 0.72
VAMP1-203ENST00000400911 COL3A1P02461 1466 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms