RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 NACAP1Q9BZK3 213 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 TMOD3Q9NYL9 352 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 ANKIB1Q9P2G1 1089 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 PI4KAP2A4QPH2 592 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 RAB11FIP3O75154 756 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 AEBP1Q8IUX7 1158 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 PI4KAP1Q8N8J0 262 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 CROCC2H7BZ55 1655 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 A2MP01023 1474 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 PRAG1Q86YV5 1406 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 PTPRCP08575 1304 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 PPFIA3O75145 1194 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 USP5P45974 858 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 CCAR1Q8IX12 1150 aaKnown RBP3.83□□□□□ -1.8
KNL1-202ENST00000399668 UBAC1Q9BSL1 405 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 TBC1D2Q9BYX2 928 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 PCDHB15Q9Y5E8 787 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 ASXL2Q76L83 1435 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 SAMD9Q5K651 1589 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 PIP4K2AP48426 406 aaPredicted RBP3.83□□□□□ -1.8
KNL1-202ENST00000399668 ISM2Q6H9L7 571 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 FILIP1Q7Z7B0 1213 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 ACEP12821 1306 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 A0A087WZG4 1122 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 MX1P20591 662 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 IFIT5Q13325 482 aaKnown RBP3.83□□□□□ -1.8
KNL1-202ENST00000399668 UBE3BQ7Z3V4 1068 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 JMYQ8N9B5 988 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 DENND4BO75064 1496 aaPredicted RBP3.83□□□□□ -1.8
KNL1-202ENST00000399668 ZPR1O75312 459 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 IMMTQ16891 758 aaKnown RBP3.83□□□□□ -1.8
KNL1-202ENST00000399668 TMEM132AQ24JP5 1023 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 HYPKQ9NX55 129 aa3.83□□□□□ -1.8
KNL1-202ENST00000399668 NUP214P35658 2090 aaPredicted RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 KRT18P05783 430 aaKnown RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 IFIT1P09914 478 aaKnown RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 FLIIQ13045 1269 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 KLHL10Q6JEL2 608 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 TFIP11Q9UBB9 837 aaKnown RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 PPIP5K1Q6PFW1 1433 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 IGHMBP2P38935 993 aaKnown RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 CHRNA2Q15822 529 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 KRT28Q7Z3Y7 464 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 RPAP2Q8IXW5 612 aaPredicted RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 SMARCE1Q969G3 411 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 NAPBQ9H115 298 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 RAI14Q9P0K7 980 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 PREX2Q70Z35 1606 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 AMOTQ4VCS5 1084 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 ZSCAN25Q6NSZ9 544 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 AIDAQ96BJ3 306 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 NUP62CLQ9H1M0 184 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 MBIPQ9NS73 344 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 ZNF652Q9Y2D9 606 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 KRT32Q14532 448 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 C16orf71Q8IYS4 520 aaPredicted RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 MEIS3Q99687 375 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 CHPF2Q9P2E5 772 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 ZNF518AQ6AHZ1 1483 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 TARBP1Q13395 1621 aaKnown RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 BAZ2AQ9UIF9 1905 aaKnown RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 ZNF213O14771 459 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 SSBP05455 408 aaKnown RBP eCLIP3.82□□□□□ -1.8
KNL1-202ENST00000399668 STIM1Q13586 685 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 PRPF40BQ6NWY9 871 aaKnown RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 PPP1R42Q7Z4L9 355 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 MKNK2Q9HBH9 465 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 DBF4Q9UBU7 674 aaPredicted RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 ZRANB1Q9UGI0 708 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 DHX29Q7Z478 1369 aaKnown RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 ABCC11Q96J66 1382 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 CEP170Q5SW79 1584 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 GOLIM4O00461 696 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 SETQ01105 290 aaPredicted RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 HSP90B2PQ58FF3 399 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 PPFIBP1Q86W92 1011 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 AK7Q96M32 723 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 DEF6Q9H4E7 631 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 ARGLU1Q9NWB6 273 aaPredicted RBP3.82□□□□□ -1.8
KNL1-202ENST00000399668 CTNNA3Q9UI47 895 aa3.82□□□□□ -1.8
KNL1-202ENST00000399668 HAND2P61296 217 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 DHX8Q14562 1220 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 MAP3K11Q16584 847 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 KNL1Q8NG31 2342 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 ATG2BQ96BY7 2078 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 RANBP6O60518 1105 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 DNAAF4Q8WXU2 420 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 TANGO6Q9C0B7 1094 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 ZBTB3Q9H5J0 574 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 AKAP2Q9Y2D5 859 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 KDM5CP41229 1560 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 ASCC3Q8N3C0 2202 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 TRPM1Q7Z4N2 1603 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 UQCRHLA0A096LP55 91 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 UQCRHP07919 91 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 CAVIN4Q5BKX8 364 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 C14orf93Q9H972 538 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 ZNHIT6Q9NWK9 470 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 WDR7Q9Y4E6 1490 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 ESPNB1AK53 854 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms