RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 ZSCAN12O43309 604 aa12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 GNL1P36915 607 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 JMYQ8N9B5 988 aa12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 MAATS1Q7Z4T9 603 aa12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 SLF2Q8IX21 1173 aa12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 FKBP4Q02790 459 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 SPA17Q15506 151 aa12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 DDX46Q7L014 1031 aaKnown RBP12.96□□□□□ -0.34
CACNA1C-206ENST00000399595 KCNH5Q8NCM2 988 aa12.96□□□□□ -0.34
CACNA1C-206ENST00000399595 MCM2P49736 904 aa12.96□□□□□ -0.34
CACNA1C-206ENST00000399595 DACT3Q96B18 629 aaPredicted RBP12.96□□□□□ -0.34
CACNA1C-206ENST00000399595 TSNARE1Q96NA8 513 aa12.96□□□□□ -0.34
CACNA1C-206ENST00000399595 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
CACNA1C-206ENST00000399595 RSPH14Q9UHP6 348 aa12.96□□□□□ -0.34
CACNA1C-206ENST00000399595 FEZ2Q9UHY8 353 aaPredicted RBP12.96□□□□□ -0.34
CACNA1C-206ENST00000399595 HOOK3Q86VS8 718 aa12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 KIF4BQ2VIQ3 1234 aa12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 MIPOL1Q8TD10 442 aa12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 MSH6P52701 1360 aa12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 SEPT8Q92599 483 aa12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 CUL5Q93034 780 aa12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 PUF60Q9UHX1 559 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
CACNA1C-206ENST00000399595 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 PPP1R9BQ96SB3 815 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 V9GYY5 206 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 POTEJP0CG39 1038 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 IMMTQ16891 758 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 CEP120Q8N960 986 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 MMRN2Q9H8L6 949 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 HYPKQ9NX55 129 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 CFAP100Q494V2 611 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 TCHPQ9BT92 498 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 NDC80O14777 642 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
CACNA1C-206ENST00000399595 WDR33Q9C0J8 1336 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 SPECC1Q5M775 1068 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 LRRC43Q8N309 656 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 SWAP70Q9UH65 585 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 CEBPAP49715 358 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 CAMK4Q16566 473 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 SYCE3A1L190 88 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 PRPF4BQ13523 1007 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 PPP4R4Q6NUP7 873 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 EHMT1Q9H9B1 1298 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 CABP5Q9NP86 173 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 KRT85P78386 507 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 OGFOD1Q8N543 542 aa12.93□□□□□ -0.34
CACNA1C-206ENST00000399595 IVLP07476 585 aa12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 SEPT14Q6ZU15 432 aa12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 ACSBG1Q96GR2 724 aa12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 K7ELQ4 463 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 HSF2BPO75031 334 aa12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 CETN2P41208 172 aa12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 CEP112Q8N8E3 955 aa12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 SEC63Q9UGP8 760 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-206ENST00000399595 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 UBAC1Q9BSL1 405 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 TRMT1Q9NXH9 659 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 CCDC63Q8NA47 563 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 HLTFQ14527 1009 aaKnown RBP eCLIP12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 PANK1Q8TE04 598 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 BMP2KQ9NSY1 1161 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 FOXO3O43524 673 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 SULT6B1Q6IMI4 303 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 LCA5Q86VQ0 697 aa12.91□□□□□ -0.34
CACNA1C-206ENST00000399595 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 IKBKGQ9Y6K9 419 aa12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 APAF1O14727 1248 aa12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 KIF5BP33176 963 aa12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 RSRC1Q96IZ7 334 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 SCAPERQ9BY12 1400 aa12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 A0A087WZG4 1122 aa12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 ZFYP08048 801 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 GBP6Q6ZN66 633 aa12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 C16orf45Q96MC5 204 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-206ENST00000399595 GNAI3P08754 354 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms