RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 IL1RAPL2Q9NP60 686 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 FEZ1Q99689 392 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 SMARCA5O60264 1052 aaPredicted RBP16.67■□□□□ 0.26
TNRC18-203ENST00000399537 CCDC175P0C221 793 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 PPM1EQ8WY54 764 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 FERMT2Q96AC1 680 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 TMX1Q9H3N1 280 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 GRIPAP1Q4V328 841 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 TAOK3Q9H2K8 898 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 SLFN5Q08AF3 891 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 CABP1Q9NZU7 370 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 ABCF2Q9UG63 623 aa16.67■□□□□ 0.26
TNRC18-203ENST00000399537 CTR9Q6PD62 1173 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 SKAP1Q86WV1 359 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 C8orf76Q96K31 380 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 EHMT1Q9H9B1 1298 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
TNRC18-203ENST00000399537 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 POLR3GO15318 223 aaPredicted RBP16.66■□□□□ 0.26
TNRC18-203ENST00000399537 PSMD1Q99460 953 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 ZHX1Q9UKY1 873 aaPredicted RBP16.66■□□□□ 0.26
TNRC18-203ENST00000399537 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 GIGYF2Q6Y7W6 1299 aaKnown RBP16.66■□□□□ 0.26
TNRC18-203ENST00000399537 A0A087WZG4 1122 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
TNRC18-203ENST00000399537 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
TNRC18-203ENST00000399537 SCAND2PQ9GZW5 306 aaPredicted RBP16.66■□□□□ 0.26
TNRC18-203ENST00000399537 YEATS4O95619 227 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 PPP4R3BQ5MIZ7 849 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 GOLGA8BA8MQT2 603 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 RAB34Q9BZG1 259 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
TNRC18-203ENST00000399537 SPATA24Q86W54 205 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 FAM107BQ9H098 131 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 AKAP2Q9Y2D5 859 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 USO1O60763 962 aaKnown RBP16.65■□□□□ 0.26
TNRC18-203ENST00000399537 TBC1D2Q9BYX2 928 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 NAPBQ9H115 298 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 PRDM11Q9NQV5 511 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 STX1AQ16623 288 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 CALCOCO1Q9P1Z2 691 aa16.65■□□□□ 0.26
TNRC18-203ENST00000399537 EXOC6BQ9Y2D4 811 aa16.64■□□□□ 0.25
TNRC18-203ENST00000399537 SSRP1Q08945 709 aaKnown RBP16.64■□□□□ 0.25
TNRC18-203ENST00000399537 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
TNRC18-203ENST00000399537 RAB11FIP3O75154 756 aa16.64■□□□□ 0.25
TNRC18-203ENST00000399537 ZFP91Q96JP5 570 aaPredicted RBP16.64■□□□□ 0.25
TNRC18-203ENST00000399537 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
TNRC18-203ENST00000399537 CAVIN4Q5BKX8 364 aa16.64■□□□□ 0.25
TNRC18-203ENST00000399537 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.25
TNRC18-203ENST00000399537 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
TNRC18-203ENST00000399537 HLTFQ14527 1009 aaKnown RBP eCLIP16.64■□□□□ 0.253e-8■□□□□ 8.1
TNRC18-203ENST00000399537 CKAP2LQ8IYA6 745 aa16.64■□□□□ 0.25
TNRC18-203ENST00000399537 IQGAP2Q13576 1575 aa16.64■□□□□ 0.25
TNRC18-203ENST00000399537 ZPR1O75312 459 aa16.64■□□□□ 0.25
TNRC18-203ENST00000399537 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
TNRC18-203ENST00000399537 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
TNRC18-203ENST00000399537 STARD3NLO95772 234 aa16.63■□□□□ 0.25
TNRC18-203ENST00000399537 MAATS1Q7Z4T9 603 aa16.63■□□□□ 0.25
TNRC18-203ENST00000399537 ITSN2Q9NZM3 1697 aa16.63■□□□□ 0.25
TNRC18-203ENST00000399537 USP25Q9UHP3 1055 aa16.63■□□□□ 0.25
TNRC18-203ENST00000399537 TDRD12Q587J7 1177 aaKnown RBP16.63■□□□□ 0.25
TNRC18-203ENST00000399537 RANBP6O60518 1105 aaKnown RBP16.62■□□□□ 0.25
TNRC18-203ENST00000399537 URI1O94763 535 aaPredicted RBP16.62■□□□□ 0.25
TNRC18-203ENST00000399537 PAFAH1B1P43034 410 aa16.62■□□□□ 0.25
TNRC18-203ENST00000399537 PUS7Q96PZ0 661 aaKnown RBP16.62■□□□□ 0.25
TNRC18-203ENST00000399537 LIG1P18858 919 aa16.62■□□□□ 0.25
TNRC18-203ENST00000399537 KIF1BPQ96EK5 621 aa16.62■□□□□ 0.25
TNRC18-203ENST00000399537 TRERF1Q96PN7 1200 aa16.62■□□□□ 0.25
TNRC18-203ENST00000399537 CTAGE5O15320 804 aa16.62■□□□□ 0.25
TNRC18-203ENST00000399537 MCM5P33992 734 aa16.62■□□□□ 0.25
TNRC18-203ENST00000399537 TMPOP42166 694 aaKnown RBP16.62■□□□□ 0.25
TNRC18-203ENST00000399537 BBXQ8WY36 941 aaPredicted RBP16.62■□□□□ 0.25
TNRC18-203ENST00000399537 FAM114A1Q8IWE2 563 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 FERP16591 822 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 CETN1Q12798 172 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 NFE2L2Q16236 605 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 SSH1Q8WYL5 1049 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 NAA15Q9BXJ9 866 aaKnown RBP16.61■□□□□ 0.25
TNRC18-203ENST00000399537 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
TNRC18-203ENST00000399537 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 CCDC194A0A1B0GVG4 234 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 FSD2A1L4K1 749 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 DRC1Q96MC2 740 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 SLC5A1P13866 664 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 TSNARE1Q96NA8 513 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 MTIF2P46199 727 aaKnown RBP16.61■□□□□ 0.25
TNRC18-203ENST00000399537 MIS18AQ9NYP9 233 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
TNRC18-203ENST00000399537 CEP112Q8N8E3 955 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 DYNC1I1O14576 645 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms