RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 TSHZ3Q63HK5 1081 aa13.87□□□□□ -0.19
C4orf3-201ENST00000399075 DDX49Q9Y6V7 483 aaKnown RBP13.87□□□□□ -0.19
C4orf3-201ENST00000399075 CUL4AQ13619 759 aa13.87□□□□□ -0.19
C4orf3-201ENST00000399075 PLEKHO1Q53GL0 409 aaPredicted RBP13.86□□□□□ -0.19
C4orf3-201ENST00000399075 BEND3Q5T5X7 828 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 PPP1R42Q7Z4L9 355 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 TRIM6-TRIM34B2RNG4 842 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 NEK4P51957 841 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 PSME1Q06323 249 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 ZGPATQ8N5A5 531 aaKnown RBP13.86□□□□□ -0.19
C4orf3-201ENST00000399075 DNAAF4Q8WXU2 420 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 LGR6Q9HBX8 967 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 ZNF445P59923 1031 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 HSP90AB4PQ58FF6 505 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 INTS4Q96HW7 963 aaKnown RBP13.86□□□□□ -0.19
C4orf3-201ENST00000399075 TMX3Q96JJ7 454 aa13.86□□□□□ -0.19
C4orf3-201ENST00000399075 ADAMTS7Q9UKP4 1686 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 TAF7LQ5H9L4 462 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 MCTP1Q6DN14 999 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 RILPL2Q969X0 211 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 CHPF2Q9P2E5 772 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 ZDHHC9Q9Y397 364 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
C4orf3-201ENST00000399075 TEFQ10587 303 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 PKP1Q13835 747 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 ZNF530Q6P9A1 599 aaPredicted RBP13.85□□□□□ -0.19
C4orf3-201ENST00000399075 RHPN1Q8TCX5 695 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 SIPA1L3O60292 1781 aaPredicted RBP13.85□□□□□ -0.19
C4orf3-201ENST00000399075 HEG1Q9ULI3 1381 aa13.85□□□□□ -0.19
C4orf3-201ENST00000399075 MTX1Q13505 466 aa13.84□□□□□ -0.19
C4orf3-201ENST00000399075 ESCO1Q5FWF5 840 aa13.84□□□□□ -0.19
C4orf3-201ENST00000399075 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
C4orf3-201ENST00000399075 ADCY9O60503 1353 aa13.84□□□□□ -0.19
C4orf3-201ENST00000399075 TRPM3Q9HCF6 1732 aaPredicted RBP13.84□□□□□ -0.19
C4orf3-201ENST00000399075 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
C4orf3-201ENST00000399075 PI4K2BQ8TCG2 481 aa13.84□□□□□ -0.19
C4orf3-201ENST00000399075 BTBD11A6QL63 1104 aa13.83□□□□□ -0.19
C4orf3-201ENST00000399075 EIF2S2P20042 333 aaKnown RBP13.83□□□□□ -0.19
C4orf3-201ENST00000399075 CLCN1P35523 988 aa13.83□□□□□ -0.19
C4orf3-201ENST00000399075 ARHGEF25Q86VW2 580 aa13.83□□□□□ -0.19
C4orf3-201ENST00000399075 UNC5CLQ8IV45 518 aa13.83□□□□□ -0.19
C4orf3-201ENST00000399075 PALD1Q9ULE6 856 aa13.83□□□□□ -0.19
C4orf3-201ENST00000399075 PXDNQ92626 1479 aa13.83□□□□□ -0.2
C4orf3-201ENST00000399075 MST1RQ04912 1400 aa13.83□□□□□ -0.2
C4orf3-201ENST00000399075 PI4KAP2A4QPH2 592 aa13.83□□□□□ -0.2
C4orf3-201ENST00000399075 SRGAP3O43295 1099 aa13.83□□□□□ -0.2
C4orf3-201ENST00000399075 PI4KAP1Q8N8J0 262 aa13.83□□□□□ -0.2
C4orf3-201ENST00000399075 DBF4Q9UBU7 674 aaPredicted RBP13.83□□□□□ -0.2
C4orf3-201ENST00000399075 RNMTO43148 476 aaKnown RBP13.83□□□□□ -0.2
C4orf3-201ENST00000399075 ALDH1L1O75891 902 aa13.83□□□□□ -0.2
C4orf3-201ENST00000399075 IL1RAPL2Q9NP60 686 aa13.83□□□□□ -0.2
C4orf3-201ENST00000399075 KIF1AQ12756 1690 aa13.82□□□□□ -0.2
C4orf3-201ENST00000399075 NBPF7P0C2Y1 421 aaPredicted RBP13.82□□□□□ -0.2
C4orf3-201ENST00000399075 HSPA4P34932 840 aa13.82□□□□□ -0.2
C4orf3-201ENST00000399075 HDAC5Q9UQL6 1122 aa13.82□□□□□ -0.2
C4orf3-201ENST00000399075 ADAMTSL3P82987 1691 aa13.82□□□□□ -0.2
C4orf3-201ENST00000399075 NPHP4O75161 1426 aaPredicted RBP13.82□□□□□ -0.2
C4orf3-201ENST00000399075 TTC41PQ6P2S7 1318 aa13.82□□□□□ -0.2
C4orf3-201ENST00000399075 BRD1O95696 1058 aa13.81□□□□□ -0.2
C4orf3-201ENST00000399075 GCP02774 474 aa13.81□□□□□ -0.2
C4orf3-201ENST00000399075 SETD1BQ9UPS6 1966 aaKnown RBP13.81□□□□□ -0.2
C4orf3-201ENST00000399075 RAD50Q92878 1312 aa13.81□□□□□ -0.2
C4orf3-201ENST00000399075 KCNQ3O43525 872 aa13.81□□□□□ -0.2
C4orf3-201ENST00000399075 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
C4orf3-201ENST00000399075 NUTM1Q86Y26 1132 aa13.81□□□□□ -0.2
C4orf3-201ENST00000399075 DHX37Q8IY37 1157 aaKnown RBP13.81□□□□□ -0.2
C4orf3-201ENST00000399075 SGSM2O43147 1006 aa13.8□□□□□ -0.2
C4orf3-201ENST00000399075 CCDC173Q0VFZ6 552 aa13.8□□□□□ -0.2
C4orf3-201ENST00000399075 CNTROBQ8N137 903 aa13.8□□□□□ -0.2
C4orf3-201ENST00000399075 LRRC59Q96AG4 307 aaKnown RBP13.8□□□□□ -0.2
C4orf3-201ENST00000399075 PPP1R9BQ96SB3 815 aa13.8□□□□□ -0.2
C4orf3-201ENST00000399075 GIGYF1O75420 1035 aaPredicted RBP13.8□□□□□ -0.2
C4orf3-201ENST00000399075 NASPP49321 788 aaPredicted RBP13.8□□□□□ -0.2
C4orf3-201ENST00000399075 ZSCAN23Q3MJ62 389 aa13.8□□□□□ -0.2
C4orf3-201ENST00000399075 MPRIPQ6WCQ1 1025 aa13.8□□□□□ -0.2
C4orf3-201ENST00000399075 KSR2Q6VAB6 950 aa13.79□□□□□ -0.2
C4orf3-201ENST00000399075 ANKRD24Q8TF21 1146 aa13.79□□□□□ -0.2
C4orf3-201ENST00000399075 GLRX3O76003 335 aaKnown RBP13.78□□□□□ -0.2
C4orf3-201ENST00000399075 MBD3O95983 291 aa13.78□□□□□ -0.2
C4orf3-201ENST00000399075 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
C4orf3-201ENST00000399075 IL25Q9H293 177 aa13.78□□□□□ -0.2
C4orf3-201ENST00000399075 ABCC6O95255 1503 aa13.78□□□□□ -0.2
C4orf3-201ENST00000399075 ESPNB1AK53 854 aa13.78□□□□□ -0.2
C4orf3-201ENST00000399075 PRPF40AO75400 957 aaKnown RBP13.78□□□□□ -0.2
C4orf3-201ENST00000399075 ERC1Q8IUD2 1116 aa13.78□□□□□ -0.2
C4orf3-201ENST00000399075 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
C4orf3-201ENST00000399075 TRIM44Q96DX7 344 aaPredicted RBP13.78□□□□□ -0.2
C4orf3-201ENST00000399075 HYPKQ9NX55 129 aa13.78□□□□□ -0.2
C4orf3-201ENST00000399075 NAP1L2Q9ULW6 460 aaPredicted RBP13.78□□□□□ -0.2
C4orf3-201ENST00000399075 GPT2Q8TD30 523 aa13.77□□□□□ -0.2
C4orf3-201ENST00000399075 NAP1L5Q96NT1 182 aaPredicted RBP13.77□□□□□ -0.2
C4orf3-201ENST00000399075 LSG1Q9H089 658 aaKnown RBP13.77□□□□□ -0.2
C4orf3-201ENST00000399075 UTYO14607 1347 aa13.77□□□□□ -0.2
C4orf3-201ENST00000399075 ANP32BQ92688 251 aaKnown RBP13.77□□□□□ -0.21
C4orf3-201ENST00000399075 RBM33Q96EV2 1170 aaKnown RBP13.77□□□□□ -0.21
C4orf3-201ENST00000399075 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.21
C4orf3-201ENST00000399075 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
C4orf3-201ENST00000399075 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms