RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
TFF3-202ENST00000398431 MRC1P22897 1456 aa16.35■□□□□ 0.21
TFF3-202ENST00000398431 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
TFF3-202ENST00000398431 DIAPH1O60610 1272 aaKnown RBP16.34■□□□□ 0.21
TFF3-202ENST00000398431 ZPR1O75312 459 aa16.34■□□□□ 0.21
TFF3-202ENST00000398431 NFIXQ14938 502 aa16.34■□□□□ 0.21
TFF3-202ENST00000398431 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
TFF3-202ENST00000398431 VSIG10Q8N0Z9 540 aa16.33■□□□□ 0.2
TFF3-202ENST00000398431 SBF1O95248 1867 aa16.32■□□□□ 0.2
TFF3-202ENST00000398431 APLP1P51693 650 aa16.32■□□□□ 0.2
TFF3-202ENST00000398431 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
TFF3-202ENST00000398431 IL17REQ8NFR9 667 aa16.31■□□□□ 0.2
TFF3-202ENST00000398431 COL15A1P39059 1388 aa16.3■□□□□ 0.2
TFF3-202ENST00000398431 SERPINB2P05120 415 aa16.3■□□□□ 0.2
TFF3-202ENST00000398431 PRELPP51888 382 aa16.3■□□□□ 0.2
TFF3-202ENST00000398431 EIF5P55010 431 aaKnown RBP16.3■□□□□ 0.2
TFF3-202ENST00000398431 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
TFF3-202ENST00000398431 NRXN2Q9P2S2 1712 aa16.3■□□□□ 0.2
TFF3-202ENST00000398431 CANXP27824 592 aaKnown RBP16.29■□□□□ 0.2
TFF3-202ENST00000398431 RBM46Q8TBY0 533 aaKnown RBP16.29■□□□□ 0.2
TFF3-202ENST00000398431 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
TFF3-202ENST00000398431 RRAGCQ9HB90 399 aa16.28■□□□□ 0.2
TFF3-202ENST00000398431 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
TFF3-202ENST00000398431 COL3A1P02461 1466 aaPredicted RBP16.28■□□□□ 0.2
TFF3-202ENST00000398431 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
TFF3-202ENST00000398431 RASSF7Q02833 373 aa16.26■□□□□ 0.19
TFF3-202ENST00000398431 ZNF790Q6PG37 636 aa16.26■□□□□ 0.19
TFF3-202ENST00000398431 KDM2BQ8NHM5 1336 aa16.25■□□□□ 0.19
TFF3-202ENST00000398431 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
TFF3-202ENST00000398431 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
TFF3-202ENST00000398431 STARD3NLO95772 234 aa16.25■□□□□ 0.19
TFF3-202ENST00000398431 HTRA3P83110 453 aa16.25■□□□□ 0.19
TFF3-202ENST00000398431 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
TFF3-202ENST00000398431 CARMIL3Q8ND23 1372 aa16.25■□□□□ 0.19
TFF3-202ENST00000398431 HEG1Q9ULI3 1381 aa16.25■□□□□ 0.19
TFF3-202ENST00000398431 KCNQ3O43525 872 aa16.24■□□□□ 0.19
TFF3-202ENST00000398431 FSTL1Q12841 308 aa16.24■□□□□ 0.19
TFF3-202ENST00000398431 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
TFF3-202ENST00000398431 BICDL1Q6ZP65 573 aa16.24■□□□□ 0.19
TFF3-202ENST00000398431 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
TFF3-202ENST00000398431 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
TFF3-202ENST00000398431 TTLL6Q8N841 843 aa16.24■□□□□ 0.19
TFF3-202ENST00000398431 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
TFF3-202ENST00000398431 C16orf71Q8IYS4 520 aaPredicted RBP16.23■□□□□ 0.19
TFF3-202ENST00000398431 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
TFF3-202ENST00000398431 TBC1D2BQ9UPU7 963 aa16.23■□□□□ 0.19
TFF3-202ENST00000398431 DLEC1Q9Y238 1755 aa16.23■□□□□ 0.19
TFF3-202ENST00000398431 A0A087WZG4 1122 aa16.22■□□□□ 0.19
TFF3-202ENST00000398431 H0YIN7 160 aa16.22■□□□□ 0.19
TFF3-202ENST00000398431 NFKBIEO00221 500 aa16.22■□□□□ 0.19
TFF3-202ENST00000398431 A1BGP04217 495 aa16.22■□□□□ 0.19
TFF3-202ENST00000398431 LMNB1P20700 586 aa16.22■□□□□ 0.19
TFF3-202ENST00000398431 TEFQ10587 303 aa16.22■□□□□ 0.19
TFF3-202ENST00000398431 TEX13AQ9BXU3 409 aaPredicted RBP16.22■□□□□ 0.19
TFF3-202ENST00000398431 SIPA1L3O60292 1781 aaPredicted RBP16.22■□□□□ 0.19
TFF3-202ENST00000398431 CEMIPQ8WUJ3 1361 aa16.22■□□□□ 0.19
TFF3-202ENST00000398431 CCDC88AQ3V6T2 1871 aa16.21■□□□□ 0.19
TFF3-202ENST00000398431 GLTPD2A6NH11 291 aa16.21■□□□□ 0.19
TFF3-202ENST00000398431 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
TFF3-202ENST00000398431 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
TFF3-202ENST00000398431 WDR90Q96KV7 1748 aa16.21■□□□□ 0.19
TFF3-202ENST00000398431 ZC3H4Q9UPT8 1303 aaKnown RBP16.2■□□□□ 0.18
TFF3-202ENST00000398431 ANKRD31Q8N7Z5 1873 aa16.2■□□□□ 0.18
TFF3-202ENST00000398431 POTECB2RU33 542 aa16.2■□□□□ 0.18
TFF3-202ENST00000398431 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
TFF3-202ENST00000398431 BRIP1Q9BX63 1249 aa16.2■□□□□ 0.18
TFF3-202ENST00000398431 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
TFF3-202ENST00000398431 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
TFF3-202ENST00000398431 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
TFF3-202ENST00000398431 JMYQ8N9B5 988 aa16.19■□□□□ 0.18
TFF3-202ENST00000398431 KLRG1Q96E93 195 aa16.19■□□□□ 0.18
TFF3-202ENST00000398431 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
TFF3-202ENST00000398431 TNRC6CQ9HCJ0 1690 aaKnown RBP16.18■□□□□ 0.18
TFF3-202ENST00000398431 VEGFAP15692 232 aaPredicted RBP16.18■□□□□ 0.18
TFF3-202ENST00000398431 PRKAR2BP31323 418 aa16.18■□□□□ 0.18
TFF3-202ENST00000398431 PRAMEF22A3QJZ6 481 aa16.17■□□□□ 0.18
TFF3-202ENST00000398431 BTBD11A6QL63 1104 aa16.17■□□□□ 0.18
TFF3-202ENST00000398431 PDE6BP35913 854 aa16.17■□□□□ 0.18
TFF3-202ENST00000398431 SMC1BQ8NDV3 1235 aa16.17■□□□□ 0.18
TFF3-202ENST00000398431 ZNF622Q969S3 477 aaKnown RBP eCLIP16.17■□□□□ 0.18
TFF3-202ENST00000398431 PDZRN3Q9UPQ7 1066 aa16.17■□□□□ 0.18
TFF3-202ENST00000398431 ZNF330Q9Y3S2 320 aaPredicted RBP16.17■□□□□ 0.18
TFF3-202ENST00000398431 C21orf2O43822 256 aa16.16■□□□□ 0.18
TFF3-202ENST00000398431 SCN7AQ01118 1682 aa16.15■□□□□ 0.18
TFF3-202ENST00000398431 PIP4K2AP48426 406 aaPredicted RBP16.15■□□□□ 0.18
TFF3-202ENST00000398431 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
TFF3-202ENST00000398431 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
TFF3-202ENST00000398431 FER1L6Q2WGJ9 1857 aa16.14■□□□□ 0.17
TFF3-202ENST00000398431 DZIP3Q86Y13 1208 aaKnown RBP16.14■□□□□ 0.17
TFF3-202ENST00000398431 COL11A2P13942 1736 aaPredicted RBP16.14■□□□□ 0.17
TFF3-202ENST00000398431 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
TFF3-202ENST00000398431 SRGNP10124 158 aa16.13■□□□□ 0.17
TFF3-202ENST00000398431 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
TFF3-202ENST00000398431 MCM10Q7L590 875 aa16.13■□□□□ 0.17
TFF3-202ENST00000398431 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
TFF3-202ENST00000398431 DICER1Q9UPY3 1922 aaKnown RBP16.12■□□□□ 0.17
TFF3-202ENST00000398431 NBPF26B4DH59 902 aa16.12■□□□□ 0.17
TFF3-202ENST00000398431 DCTN1Q14203 1278 aa16.12■□□□□ 0.17
TFF3-202ENST00000398431 STYK1Q6J9G0 422 aa16.12■□□□□ 0.17
TFF3-202ENST00000398431 NBPF10Q6P3W6 841 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms