RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 TMX3Q96JJ7 454 aa12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 CRB1P82279 1406 aa12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 CHMLP26374 656 aa12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.38
CPSF1P1-201ENST00000397477 KIF1BPQ96EK5 621 aa12.65□□□□□ -0.38
CPSF1P1-201ENST00000397477 GPATCH3Q96I76 525 aa12.65□□□□□ -0.38
CPSF1P1-201ENST00000397477 CCDC85AQ96PX6 553 aaPredicted RBP12.65□□□□□ -0.38
CPSF1P1-201ENST00000397477 STRN4Q9NRL3 753 aa12.65□□□□□ -0.38
CPSF1P1-201ENST00000397477 HTATSF1O43719 755 aaKnown RBP12.65□□□□□ -0.38
CPSF1P1-201ENST00000397477 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
CPSF1P1-201ENST00000397477 MYD88Q99836 296 aa12.65□□□□□ -0.38
CPSF1P1-201ENST00000397477 SOS1Q07889 1333 aaPredicted RBP12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 AXIN2Q9Y2T1 843 aa12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 RNMTO43148 476 aaKnown RBP12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 HSPA2P54652 639 aa12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 KIF20BQ96Q89 1820 aa12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 FOSBP53539 338 aa12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 GAS2L3Q86XJ1 694 aa12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 FSD1Q9BTV5 496 aa12.64□□□□□ -0.39
CPSF1P1-201ENST00000397477 VPS37CA5D8V6 355 aaPredicted RBP12.63□□□□□ -0.39
CPSF1P1-201ENST00000397477 NEUROD6Q96NK8 337 aa12.63□□□□□ -0.39
CPSF1P1-201ENST00000397477 DNAJC2Q99543 621 aaKnown RBP12.63□□□□□ -0.39
CPSF1P1-201ENST00000397477 PRPF40BQ6NWY9 871 aaKnown RBP12.63□□□□□ -0.39
CPSF1P1-201ENST00000397477 CEP170BQ9Y4F5 1589 aaPredicted RBP12.63□□□□□ -0.39
CPSF1P1-201ENST00000397477 NDUFB9Q9Y6M9 179 aa12.63□□□□□ -0.39
CPSF1P1-201ENST00000397477 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
CPSF1P1-201ENST00000397477 TECPR2O15040 1411 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 COPS6Q7L5N1 327 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 HSP90AB4PQ58FF6 505 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 CHMP4AQ9BY43 222 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 SYCE3A1L190 88 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 STK3Q13188 491 aa12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 RRAGDQ9NQL2 400 aaPredicted RBP12.62□□□□□ -0.39
CPSF1P1-201ENST00000397477 FIBPO43427 364 aa12.61□□□□□ -0.39
CPSF1P1-201ENST00000397477 CABP4P57796 275 aa12.61□□□□□ -0.39
CPSF1P1-201ENST00000397477 PPFIA3O75145 1194 aa12.61□□□□□ -0.39
CPSF1P1-201ENST00000397477 SMC3Q9UQE7 1217 aa12.61□□□□□ -0.39
CPSF1P1-201ENST00000397477 PTMSP20962 102 aa12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 TOM1L2Q6ZVM7 507 aa12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 BEND3Q5T5X7 828 aa12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 UBE3BQ7Z3V4 1068 aa12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 CCDC83Q8IWF9 413 aa12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 IL25Q9H293 177 aa12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 BICC1Q9H694 974 aaKnown RBP12.6□□□□□ -0.39
CPSF1P1-201ENST00000397477 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 HSP90B1P14625 803 aaKnown RBP12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 EVA1CP58658 441 aa12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 KSR2Q6VAB6 950 aa12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 FAM43AQ8N2R8 423 aa12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 SYTL4Q96C24 671 aaPredicted RBP12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 EDC3Q96F86 508 aaKnown RBP12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 RGS12O14924 1447 aa12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 ZKSCAN1P17029 563 aaPredicted RBP12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 GIGYF1O75420 1035 aaPredicted RBP12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 GLRX3O76003 335 aaKnown RBP12.59□□□□□ -0.39
CPSF1P1-201ENST00000397477 MSNP26038 577 aaKnown RBP12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 NECAB1Q8N987 351 aa12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 SUCLG2Q96I99 432 aa12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 GRM8O00222 908 aa12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 ARHGEF25Q86VW2 580 aa12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 SSH3Q8TE77 659 aa12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 ECHDC1Q9NTX5 307 aa12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 IBTKQ9P2D0 1353 aaPredicted RBP12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 ZBTB3Q9H5J0 574 aa12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
CPSF1P1-201ENST00000397477 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
CPSF1P1-201ENST00000397477 UBE2Q2Q8WVN8 375 aa12.57□□□□□ -0.4
CPSF1P1-201ENST00000397477 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
CPSF1P1-201ENST00000397477 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
CPSF1P1-201ENST00000397477 HYPKQ9NX55 129 aa12.57□□□□□ -0.4
CPSF1P1-201ENST00000397477 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
CPSF1P1-201ENST00000397477 KDRP35968 1356 aa12.57□□□□□ -0.4
CPSF1P1-201ENST00000397477 A0A087WZG4 1122 aa12.57□□□□□ -0.4
CPSF1P1-201ENST00000397477 ZNF790Q6PG37 636 aa12.56□□□□□ -0.4
CPSF1P1-201ENST00000397477 FAM227BQ96M60 508 aa12.56□□□□□ -0.4
CPSF1P1-201ENST00000397477 NRXN3Q9Y4C0 1643 aa12.56□□□□□ -0.4
CPSF1P1-201ENST00000397477 GOLGA6L4A6NEF3 574 aa12.56□□□□□ -0.4
CPSF1P1-201ENST00000397477 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
CPSF1P1-201ENST00000397477 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
CPSF1P1-201ENST00000397477 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
CPSF1P1-201ENST00000397477 PDRG1Q9NUG6 133 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms