RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
SYNE4-203ENST00000397428 CHRNA5P30532 468 aa16.2■□□□□ 0.18
SYNE4-203ENST00000397428 NFIXQ14938 502 aa16.18■□□□□ 0.18
SYNE4-203ENST00000397428 BCL2L12Q9HB09 334 aa16.18■□□□□ 0.18
SYNE4-203ENST00000397428 MRC1P22897 1456 aa16.17■□□□□ 0.18
SYNE4-203ENST00000397428 RBM46Q8TBY0 533 aaKnown RBP16.17■□□□□ 0.18
SYNE4-203ENST00000397428 KCPQ6ZWJ8 1503 aa16.17■□□□□ 0.18
SYNE4-203ENST00000397428 ZBTB1Q9Y2K1 713 aa16.16■□□□□ 0.18
SYNE4-203ENST00000397428 SERPINB2P05120 415 aa16.15■□□□□ 0.18
SYNE4-203ENST00000397428 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
SYNE4-203ENST00000397428 CC2D1BQ5T0F9 858 aaKnown RBP16.15■□□□□ 0.18
SYNE4-203ENST00000397428 IL17REQ8NFR9 667 aa16.15■□□□□ 0.18
SYNE4-203ENST00000397428 RNF181Q9P0P0 153 aa16.15■□□□□ 0.18
SYNE4-203ENST00000397428 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
SYNE4-203ENST00000397428 SBF1O95248 1867 aa16.14■□□□□ 0.17
SYNE4-203ENST00000397428 VIRMAQ69YN4 1812 aaKnown RBP16.14■□□□□ 0.17
SYNE4-203ENST00000397428 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
SYNE4-203ENST00000397428 COL15A1P39059 1388 aa16.13■□□□□ 0.17
SYNE4-203ENST00000397428 STARD3NLO95772 234 aa16.13■□□□□ 0.17
SYNE4-203ENST00000397428 CANXP27824 592 aaKnown RBP16.13■□□□□ 0.17
SYNE4-203ENST00000397428 FSTL1Q12841 308 aa16.13■□□□□ 0.17
SYNE4-203ENST00000397428 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
SYNE4-203ENST00000397428 RRAGCQ9HB90 399 aa16.13■□□□□ 0.17
SYNE4-203ENST00000397428 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
SYNE4-203ENST00000397428 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
SYNE4-203ENST00000397428 C16orf71Q8IYS4 520 aaPredicted RBP16.12■□□□□ 0.17
SYNE4-203ENST00000397428 ZNF496Q96IT1 587 aaPredicted RBP16.12■□□□□ 0.17
SYNE4-203ENST00000397428 UBR2Q8IWV8 1755 aa16.11■□□□□ 0.17
SYNE4-203ENST00000397428 A0A087WZG4 1122 aa16.11■□□□□ 0.17
SYNE4-203ENST00000397428 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
SYNE4-203ENST00000397428 PRELPP51888 382 aa16.11■□□□□ 0.17
SYNE4-203ENST00000397428 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
SYNE4-203ENST00000397428 TTLL6Q8N841 843 aa16.11■□□□□ 0.17
SYNE4-203ENST00000397428 H0YIN7 160 aa16.1■□□□□ 0.17
SYNE4-203ENST00000397428 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
SYNE4-203ENST00000397428 TTC5Q8N0Z6 440 aa16.1■□□□□ 0.17
SYNE4-203ENST00000397428 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
SYNE4-203ENST00000397428 LMNB1P20700 586 aa16.09■□□□□ 0.17
SYNE4-203ENST00000397428 GAS2L2Q8NHY3 880 aa16.09■□□□□ 0.17
SYNE4-203ENST00000397428 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
SYNE4-203ENST00000397428 COL3A1P02461 1466 aaPredicted RBP16.09■□□□□ 0.17
SYNE4-203ENST00000397428 GLTPD2A6NH11 291 aa16.08■□□□□ 0.16
SYNE4-203ENST00000397428 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
SYNE4-203ENST00000397428 TEFQ10587 303 aa16.08■□□□□ 0.16
SYNE4-203ENST00000397428 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.16
SYNE4-203ENST00000397428 BRIP1Q9BX63 1249 aa16.08■□□□□ 0.16
SYNE4-203ENST00000397428 PDZRN3Q9UPQ7 1066 aa16.08■□□□□ 0.16
SYNE4-203ENST00000397428 IL6STP40189 918 aaPredicted RBP16.07■□□□□ 0.16
SYNE4-203ENST00000397428 RASSF7Q02833 373 aa16.07■□□□□ 0.16
SYNE4-203ENST00000397428 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
SYNE4-203ENST00000397428 JMYQ8N9B5 988 aa16.07■□□□□ 0.16
SYNE4-203ENST00000397428 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
SYNE4-203ENST00000397428 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
SYNE4-203ENST00000397428 DLEC1Q9Y238 1755 aa16.07■□□□□ 0.16
SYNE4-203ENST00000397428 CEMIPQ8WUJ3 1361 aa16.06■□□□□ 0.16
SYNE4-203ENST00000397428 VEGFAP15692 232 aaPredicted RBP16.06■□□□□ 0.16
SYNE4-203ENST00000397428 KLRG1Q96E93 195 aa16.06■□□□□ 0.16
SYNE4-203ENST00000397428 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
SYNE4-203ENST00000397428 CARMIL3Q8ND23 1372 aa16.05■□□□□ 0.16
SYNE4-203ENST00000397428 NFKBIEO00221 500 aa16.05■□□□□ 0.16
SYNE4-203ENST00000397428 A1BGP04217 495 aa16.05■□□□□ 0.16
SYNE4-203ENST00000397428 PDE6BP35913 854 aa16.05■□□□□ 0.16
SYNE4-203ENST00000397428 HTRA3P83110 453 aa16.05■□□□□ 0.16
SYNE4-203ENST00000397428 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
SYNE4-203ENST00000397428 WDR90Q96KV7 1748 aa16.05■□□□□ 0.16
SYNE4-203ENST00000397428 POTECB2RU33 542 aa16.04■□□□□ 0.16
SYNE4-203ENST00000397428 KCNQ3O43525 872 aa16.04■□□□□ 0.16
SYNE4-203ENST00000397428 PRR5LQ6MZQ0 368 aa16.04■□□□□ 0.16
SYNE4-203ENST00000397428 SMC1BQ8NDV3 1235 aa16.04■□□□□ 0.16
SYNE4-203ENST00000397428 TNRC6CQ9HCJ0 1690 aaKnown RBP16.04■□□□□ 0.16
SYNE4-203ENST00000397428 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
SYNE4-203ENST00000397428 ANKRD31Q8N7Z5 1873 aa16.02■□□□□ 0.16
SYNE4-203ENST00000397428 BTBD11A6QL63 1104 aa16.02■□□□□ 0.16
SYNE4-203ENST00000397428 CAMTA2O94983 1202 aa16.02■□□□□ 0.16
SYNE4-203ENST00000397428 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.16
SYNE4-203ENST00000397428 ZNF622Q969S3 477 aaKnown RBP eCLIP16.02■□□□□ 0.16
SYNE4-203ENST00000397428 SETDB2Q96T68 719 aa16.02■□□□□ 0.16
SYNE4-203ENST00000397428 USP16Q9Y5T5 823 aa16.02■□□□□ 0.16
SYNE4-203ENST00000397428 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
SYNE4-203ENST00000397428 C21orf2O43822 256 aa16.01■□□□□ 0.15
SYNE4-203ENST00000397428 PRKAR2BP31323 418 aa16.01■□□□□ 0.15
SYNE4-203ENST00000397428 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
SYNE4-203ENST00000397428 SRGNP10124 158 aa16■□□□□ 0.15
SYNE4-203ENST00000397428 STYK1Q6J9G0 422 aa16■□□□□ 0.15
SYNE4-203ENST00000397428 DPY19L2Q6NUT2 758 aa16■□□□□ 0.15
SYNE4-203ENST00000397428 CLEC4GQ6UXB4 293 aa16■□□□□ 0.15
SYNE4-203ENST00000397428 CFAP53Q96M91 514 aa16■□□□□ 0.15
SYNE4-203ENST00000397428 LTBP3Q9NS15 1303 aa15.99■□□□□ 0.15
SYNE4-203ENST00000397428 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
SYNE4-203ENST00000397428 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
SYNE4-203ENST00000397428 CNKSR1Q969H4 720 aa15.99■□□□□ 0.15
SYNE4-203ENST00000397428 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
SYNE4-203ENST00000397428 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
SYNE4-203ENST00000397428 SNRPA1P09661 255 aaKnown RBP15.98■□□□□ 0.15
SYNE4-203ENST00000397428 ERFEQ4G0M1 354 aa15.98■□□□□ 0.15
SYNE4-203ENST00000397428 CNBD1Q8NA66 436 aa15.98■□□□□ 0.15
SYNE4-203ENST00000397428 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
SYNE4-203ENST00000397428 FER1L6Q2WGJ9 1857 aa15.97■□□□□ 0.15
SYNE4-203ENST00000397428 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
SYNE4-203ENST00000397428 RGL2O15211 777 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms