RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 STK31Q9BXU1 1019 aa11.02□□□□□ -0.65
CAPN3-206ENST00000397163 PNMA6EA0A0J9YXQ4 647 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-206ENST00000397163 UNC5CLQ8IV45 518 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 SALL3Q9BXA9 1300 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 TMEM131LA2VDJ0 1609 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 SOX12O15370 315 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 FIBPO43427 364 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 GNAI3P08754 354 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 FKBP5Q13451 457 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-206ENST00000397163 C3P01024 1663 aa11.01□□□□□ -0.65
CAPN3-206ENST00000397163 MYO5BQ9ULV0 1848 aa11□□□□□ -0.65
CAPN3-206ENST00000397163 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
CAPN3-206ENST00000397163 IL1RAPL2Q9NP60 686 aa11□□□□□ -0.65
CAPN3-206ENST00000397163 SSH2Q76I76 1423 aa11□□□□□ -0.65
CAPN3-206ENST00000397163 ZSCAN22P10073 491 aaPredicted RBP11□□□□□ -0.65
CAPN3-206ENST00000397163 ATP8B2P98198 1209 aa11□□□□□ -0.65
CAPN3-206ENST00000397163 IPO4Q8TEX9 1081 aaKnown RBP11□□□□□ -0.65
CAPN3-206ENST00000397163 NECTIN2Q92692 538 aa11□□□□□ -0.65
CAPN3-206ENST00000397163 SETD1BQ9UPS6 1966 aaKnown RBP11□□□□□ -0.65
CAPN3-206ENST00000397163 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
CAPN3-206ENST00000397163 MAP4K4O95819 1239 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-206ENST00000397163 UBE2HP62256 183 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 TRERF1Q96PN7 1200 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 TNRQ92752 1358 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 FOXO3O43524 673 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 KDM4AO75164 1064 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 HSPA4P34932 840 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 KCNJ4P48050 445 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 IL25Q9H293 177 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 CPS1P31327 1500 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 STX6O43752 255 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 NUTM1Q86Y26 1132 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 STAP2Q9UGK3 403 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 SMC3Q9UQE7 1217 aa10.99□□□□□ -0.65
CAPN3-206ENST00000397163 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
CAPN3-206ENST00000397163 RPAP1Q9BWH6 1393 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-206ENST00000397163 FLIIQ13045 1269 aa10.98□□□□□ -0.65
CAPN3-206ENST00000397163 CERS3Q8IU89 383 aa10.98□□□□□ -0.65
CAPN3-206ENST00000397163 ATP6V1DQ9Y5K8 247 aa10.98□□□□□ -0.65
CAPN3-206ENST00000397163 ERICH4A6NGS2 130 aa10.98□□□□□ -0.65
CAPN3-206ENST00000397163 SYT1P21579 422 aa10.98□□□□□ -0.65
CAPN3-206ENST00000397163 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-206ENST00000397163 CRB1P82279 1406 aa10.98□□□□□ -0.65
CAPN3-206ENST00000397163 CHAF1AQ13111 956 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-206ENST00000397163 NAA30Q147X3 362 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-206ENST00000397163 GTF2F1P35269 517 aaKnown RBP eCLIP10.97□□□□□ -0.65
CAPN3-206ENST00000397163 SPC24Q8NBT2 197 aa10.97□□□□□ -0.65
CAPN3-206ENST00000397163 SPTLC3Q9NUV7 552 aa10.97□□□□□ -0.65
CAPN3-206ENST00000397163 F13A1P00488 732 aa10.97□□□□□ -0.65
CAPN3-206ENST00000397163 AK2P54819 239 aa10.97□□□□□ -0.65
CAPN3-206ENST00000397163 IL17RAQ96F46 866 aa10.97□□□□□ -0.65
CAPN3-206ENST00000397163 LIMCH1Q9UPQ0 1083 aa10.97□□□□□ -0.65
CAPN3-206ENST00000397163 ZNF142P52746 1687 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-206ENST00000397163 DLC1Q96QB1 1528 aa10.96□□□□□ -0.65
CAPN3-206ENST00000397163 IRX5P78411 483 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-206ENST00000397163 MTHFSDQ2M296 383 aaKnown RBP10.96□□□□□ -0.65
CAPN3-206ENST00000397163 SNX14Q9Y5W7 946 aa10.96□□□□□ -0.65
CAPN3-206ENST00000397163 UBTFL1P0CB47 393 aaPredicted RBP10.96□□□□□ -0.66
CAPN3-206ENST00000397163 CCDC30Q5VVM6 783 aa10.96□□□□□ -0.66
CAPN3-206ENST00000397163 DIAPH3Q9NSV4 1193 aa10.96□□□□□ -0.66
CAPN3-206ENST00000397163 RAD50Q92878 1312 aa10.96□□□□□ -0.66
CAPN3-206ENST00000397163 NUTM2FA1L443 756 aa10.96□□□□□ -0.66
CAPN3-206ENST00000397163 EPB41L2O43491 1005 aaKnown RBP10.96□□□□□ -0.66
CAPN3-206ENST00000397163 DTNBO60941 627 aa10.96□□□□□ -0.66
CAPN3-206ENST00000397163 SURF6O75683 361 aaKnown RBP10.96□□□□□ -0.66
CAPN3-206ENST00000397163 PYCARDQ9ULZ3 195 aa10.96□□□□□ -0.66
CAPN3-206ENST00000397163 SGSM2O43147 1006 aa10.95□□□□□ -0.66
CAPN3-206ENST00000397163 DNM1Q05193 864 aaKnown RBP10.95□□□□□ -0.66
CAPN3-206ENST00000397163 RUFY3Q7L099 469 aa10.95□□□□□ -0.66
CAPN3-206ENST00000397163 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
CAPN3-206ENST00000397163 AOX1Q06278 1338 aa10.95□□□□□ -0.66
CAPN3-206ENST00000397163 TTC21BQ7Z4L5 1316 aa10.95□□□□□ -0.66
CAPN3-206ENST00000397163 GOLGA6L6A8MZA4 724 aa10.95□□□□□ -0.66
CAPN3-206ENST00000397163 ZBTB9Q96C00 473 aa10.95□□□□□ -0.66
CAPN3-206ENST00000397163 CPA1P15085 419 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 CWC27Q6UX04 472 aaKnown RBP10.94□□□□□ -0.66
CAPN3-206ENST00000397163 CCDC83Q8IWF9 413 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 KIAA1524Q8TCG1 905 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 TTC14Q96N46 770 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 SOS1Q07889 1333 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-206ENST00000397163 MAP3K19Q56UN5 1328 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 VPS37CA5D8V6 355 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-206ENST00000397163 TPM3P06753 285 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 CASTP20810 708 aaKnown RBP10.94□□□□□ -0.66
CAPN3-206ENST00000397163 CNTROBQ8N137 903 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 SPG7Q9UQ90 795 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 METP08581 1390 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 CCDC192P0DO97 292 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 GJB2P29033 226 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 FUCA2Q9BTY2 467 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
CAPN3-206ENST00000397163 PRR36Q9H6K5 1346 aa10.93□□□□□ -0.66
CAPN3-206ENST00000397163 AP5Z1O43299 807 aa10.93□□□□□ -0.66
CAPN3-206ENST00000397163 LSG1Q9H089 658 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms