RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PROCA1Q8NCQ7 364 aaPredicted RBP14.23□□□□□ -0.13
SMU1-201ENST00000397149 EPSTI1Q96J88 318 aa14.23□□□□□ -0.13
SMU1-201ENST00000397149 CETN1Q12798 172 aa14.23□□□□□ -0.13
SMU1-201ENST00000397149 KANK4Q5T7N3 995 aaPredicted RBP14.23□□□□□ -0.13
SMU1-201ENST00000397149 SEPT14Q6ZU15 432 aa14.23□□□□□ -0.13
SMU1-201ENST00000397149 SMIM23A6NLE4 172 aa14.23□□□□□ -0.13
SMU1-201ENST00000397149 RFC1P35251 1148 aaPredicted RBP14.23□□□□□ -0.13
SMU1-201ENST00000397149 FAM212AQ96EL1 285 aa14.23□□□□□ -0.13
SMU1-201ENST00000397149 CEP126Q9P2H0 1117 aa14.23□□□□□ -0.13
SMU1-201ENST00000397149 TMEM266Q2M3C6 531 aa14.23□□□□□ -0.13
SMU1-201ENST00000397149 ZNF444Q8N0Y2 327 aaPredicted RBP14.23□□□□□ -0.13
SMU1-201ENST00000397149 CWC25Q9NXE8 425 aaPredicted RBP14.22□□□□□ -0.13
SMU1-201ENST00000397149 NAA15Q9BXJ9 866 aaKnown RBP14.22□□□□□ -0.13
SMU1-201ENST00000397149 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
SMU1-201ENST00000397149 BIN1O00499 593 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 MCM3P25205 808 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 SNX16P57768 344 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 TAF12Q16514 161 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 LRRC45Q96CN5 670 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 CCDC144AA2RUR9 1427 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 METTL24Q5JXM2 366 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 CEP135Q66GS9 1140 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 CYB5RLQ6IPT4 315 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 KIAA0753Q2KHM9 967 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
SMU1-201ENST00000397149 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 TWISTNBQ3B726 338 aaPredicted RBP14.22□□□□□ -0.13
SMU1-201ENST00000397149 CCDC83Q8IWF9 413 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 KIF18AQ8NI77 898 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 ALS2CR12Q96Q35 445 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 HAUS7Q99871 368 aa14.22□□□□□ -0.13
SMU1-201ENST00000397149 FANCIQ9NVI1 1328 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 RFX1P22670 979 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 GSTA5Q7RTV2 222 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMU1-201ENST00000397149 V9GYY5 206 aaPredicted RBP14.21□□□□□ -0.13
SMU1-201ENST00000397149 FGFR1OPO95684 399 aaKnown RBP14.21□□□□□ -0.13
SMU1-201ENST00000397149 CTNNA3Q9UI47 895 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 YEATS4O95619 227 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 MTHFSP49914 203 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 BIRC2Q13490 618 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 DNAAF4Q8WXU2 420 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 K7ELQ4 463 aaPredicted RBP14.21□□□□□ -0.13
SMU1-201ENST00000397149 GEN1Q17RS7 908 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 AKNAD1Q5T1N1 836 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 SMC6Q96SB8 1091 aa14.21□□□□□ -0.13
SMU1-201ENST00000397149 EXOSC9Q06265 439 aaKnown RBP14.2□□□□□ -0.14
SMU1-201ENST00000397149 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 PPFIA3O75145 1194 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 PHACTR2O75167 634 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 IRX5P78411 483 aaPredicted RBP14.2□□□□□ -0.14
SMU1-201ENST00000397149 NUTM1Q86Y26 1132 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 CCDC155Q8N6L0 562 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 C16orf45Q96MC5 204 aaPredicted RBP14.2□□□□□ -0.14
SMU1-201ENST00000397149 MKRN1Q9UHC7 482 aaKnown RBP14.2□□□□□ -0.14
SMU1-201ENST00000397149 DDX46Q7L014 1031 aaKnown RBP14.2□□□□□ -0.14
SMU1-201ENST00000397149 HSPA4P34932 840 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 CCDC174Q6PII3 467 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 WRNQ14191 1432 aaPredicted RBP eCLIP14.2□□□□□ -0.14
SMU1-201ENST00000397149 KIF4AO95239 1232 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 CEP83Q9Y592 693 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 SRGAP3O43295 1099 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 PDE1CQ14123 709 aaPredicted RBP14.2□□□□□ -0.14
SMU1-201ENST00000397149 PSMD6Q15008 389 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 GAS2L2Q8NHY3 880 aa14.2□□□□□ -0.14
SMU1-201ENST00000397149 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
SMU1-201ENST00000397149 KIF3CO14782 793 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 DACT3Q96B18 629 aaPredicted RBP14.19□□□□□ -0.14
SMU1-201ENST00000397149 LARP6Q9BRS8 491 aaKnown RBP14.19□□□□□ -0.14
SMU1-201ENST00000397149 CARMIL2Q6F5E8 1435 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 CLIP2Q9UDT6 1046 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 HSF2BPO75031 334 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 PPP2R5CQ13362 524 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 SELENOSQ9BQE4 189 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 GPRASP1Q5JY77 1395 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 FAM160A1Q05DH4 1040 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 PRKAR2BP31323 418 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 BANK1Q8NDB2 785 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 ZNF287Q9HBT7 754 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 EEF2P13639 858 aaKnown RBP14.19□□□□□ -0.14
SMU1-201ENST00000397149 WWC3Q9ULE0 1092 aa14.19□□□□□ -0.14
SMU1-201ENST00000397149 BAG4O95429 457 aaKnown RBP14.18□□□□□ -0.14
SMU1-201ENST00000397149 KRT13P13646 458 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 PROSER2Q86WR7 435 aaPredicted RBP14.18□□□□□ -0.14
SMU1-201ENST00000397149 CEP57Q86XR8 500 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 CNNM3Q8NE01 707 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 RAB34Q9BZG1 259 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 TMEM132EQ6IEE7 984 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 WHAMMQ8TF30 809 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 CAVIN4Q5BKX8 364 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 STX6O43752 255 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 EHMT1Q9H9B1 1298 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 ERCC5P28715 1186 aaPredicted RBP14.18□□□□□ -0.14
SMU1-201ENST00000397149 RASA3Q14644 834 aa14.18□□□□□ -0.14
SMU1-201ENST00000397149 PRPF31Q8WWY3 499 aaKnown RBP14.18□□□□□ -0.14
SMU1-201ENST00000397149 CCDC194A0A1B0GVG4 234 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 GMNNO75496 209 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 CRCPO75575 148 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 PLCB3Q01970 1234 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms