RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 CHPF2Q9P2E5 772 aa17.28■□□□□ 0.36
MCF2L-209ENST00000397036 USP16Q9Y5T5 823 aa17.28■□□□□ 0.36
MCF2L-209ENST00000397036 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
MCF2L-209ENST00000397036 TMEM57Q8N5G2 664 aa17.27■□□□□ 0.36
MCF2L-209ENST00000397036 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-209ENST00000397036 RGS12O14924 1447 aa17.27■□□□□ 0.36
MCF2L-209ENST00000397036 UBR2Q8IWV8 1755 aa17.27■□□□□ 0.35
MCF2L-209ENST00000397036 A0A0G2JS52 829 aa17.26■□□□□ 0.35
MCF2L-209ENST00000397036 MYT1Q01538 1121 aa17.26■□□□□ 0.35
MCF2L-209ENST00000397036 NECTIN2Q92692 538 aa17.26■□□□□ 0.35
MCF2L-209ENST00000397036 ITGB4P16144 1822 aa17.25■□□□□ 0.35
MCF2L-209ENST00000397036 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
MCF2L-209ENST00000397036 CCT4P50991 539 aaKnown RBP17.25■□□□□ 0.35
MCF2L-209ENST00000397036 LRP10Q7Z4F1 713 aa17.25■□□□□ 0.35
MCF2L-209ENST00000397036 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-209ENST00000397036 CCDC136Q96JN2 1154 aa17.25■□□□□ 0.35
MCF2L-209ENST00000397036 ZBTB7BO15156 539 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-209ENST00000397036 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-209ENST00000397036 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
MCF2L-209ENST00000397036 ZBTB40Q9NUA8 1239 aa17.24■□□□□ 0.35
MCF2L-209ENST00000397036 STARD3NLO95772 234 aa17.23■□□□□ 0.35
MCF2L-209ENST00000397036 PHAXQ9H814 394 aaKnown RBP17.23■□□□□ 0.35
MCF2L-209ENST00000397036 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-209ENST00000397036 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
MCF2L-209ENST00000397036 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
MCF2L-209ENST00000397036 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
MCF2L-209ENST00000397036 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
MCF2L-209ENST00000397036 PXDNLA1KZ92 1463 aa17.21■□□□□ 0.35
MCF2L-209ENST00000397036 KCNQ2O43526 872 aa17.21■□□□□ 0.34
MCF2L-209ENST00000397036 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.34
MCF2L-209ENST00000397036 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.34
MCF2L-209ENST00000397036 KAT6BQ8WYB5 2073 aa17.2■□□□□ 0.34
MCF2L-209ENST00000397036 DOT1LQ8TEK3 1739 aa17.2■□□□□ 0.34
MCF2L-209ENST00000397036 RXRBP28702 533 aa17.2■□□□□ 0.34
MCF2L-209ENST00000397036 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
MCF2L-209ENST00000397036 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
MCF2L-209ENST00000397036 DNAAF4Q8WXU2 420 aa17.2■□□□□ 0.34
MCF2L-209ENST00000397036 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
MCF2L-209ENST00000397036 LOC102724428A0A0B4J2F2 783 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 F6X3S4 739 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 ANXA1P04083 346 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-209ENST00000397036 SIK1P57059 783 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 NBPF14Q5TI25 921 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 NBPF10Q6P3W6 841 aaKnown RBP17.19■□□□□ 0.34
MCF2L-209ENST00000397036 DNAJC10Q8IXB1 793 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
MCF2L-209ENST00000397036 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
MCF2L-209ENST00000397036 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-209ENST00000397036 C5P01031 1676 aa17.18■□□□□ 0.34
MCF2L-209ENST00000397036 A1BGP04217 495 aa17.17■□□□□ 0.34
MCF2L-209ENST00000397036 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
MCF2L-209ENST00000397036 XAGE3Q8WTP9 111 aa17.17■□□□□ 0.34
MCF2L-209ENST00000397036 RGS17Q9UGC6 210 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-209ENST00000397036 ADCY9O60503 1353 aa17.17■□□□□ 0.34
MCF2L-209ENST00000397036 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
MCF2L-209ENST00000397036 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
MCF2L-209ENST00000397036 ALDH1L1O75891 902 aa17.16■□□□□ 0.34
MCF2L-209ENST00000397036 BEND3Q5T5X7 828 aa17.16■□□□□ 0.34
MCF2L-209ENST00000397036 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
MCF2L-209ENST00000397036 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
MCF2L-209ENST00000397036 MYL6BP14649 208 aa17.16■□□□□ 0.34
MCF2L-209ENST00000397036 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
MCF2L-209ENST00000397036 SRCIN1Q9C0H9 1055 aa17.16■□□□□ 0.34
MCF2L-209ENST00000397036 KDM2BQ8NHM5 1336 aa17.15■□□□□ 0.34
MCF2L-209ENST00000397036 GNAI3P08754 354 aa17.15■□□□□ 0.34
MCF2L-209ENST00000397036 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-209ENST00000397036 CENPQQ7L2Z9 268 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-209ENST00000397036 LINS1Q8NG48 757 aa17.15■□□□□ 0.34
MCF2L-209ENST00000397036 PLBD2Q8NHP8 589 aa17.15■□□□□ 0.34
MCF2L-209ENST00000397036 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
MCF2L-209ENST00000397036 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-209ENST00000397036 HMGB2P26583 209 aaKnown RBP17.14■□□□□ 0.33
MCF2L-209ENST00000397036 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
MCF2L-209ENST00000397036 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-209ENST00000397036 ZNF831Q5JPB2 1677 aa17.14■□□□□ 0.33
MCF2L-209ENST00000397036 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
MCF2L-209ENST00000397036 IL6STP40189 918 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-209ENST00000397036 RIC3Q7Z5B4 369 aa17.13■□□□□ 0.33
MCF2L-209ENST00000397036 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-209ENST00000397036 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
MCF2L-209ENST00000397036 USP44Q9H0E7 712 aa17.12■□□□□ 0.33
MCF2L-209ENST00000397036 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
MCF2L-209ENST00000397036 NEXNQ0ZGT2 675 aa17.11■□□□□ 0.33
MCF2L-209ENST00000397036 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
MCF2L-209ENST00000397036 RC3H1Q5TC82 1133 aaKnown RBP17.11■□□□□ 0.33
MCF2L-209ENST00000397036 POTEAQ6S8J7 498 aa17.11■□□□□ 0.33
MCF2L-209ENST00000397036 RPAP2Q8IXW5 612 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-209ENST00000397036 ITPK1Q13572 414 aa17.11■□□□□ 0.33
MCF2L-209ENST00000397036 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
MCF2L-209ENST00000397036 PTF1AQ7RTS3 328 aa17.11■□□□□ 0.33
MCF2L-209ENST00000397036 MEIS3Q99687 375 aa17.11■□□□□ 0.33
MCF2L-209ENST00000397036 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
MCF2L-209ENST00000397036 IGHDP01880 384 aa17.1■□□□□ 0.33
MCF2L-209ENST00000397036 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
MCF2L-209ENST00000397036 UTYO14607 1347 aa17.1■□□□□ 0.33
MCF2L-209ENST00000397036 GNAI2P04899 355 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms