RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 SIPA1L3O60292 1781 aaPredicted RBP25.22■■□□□ 1.63
MCF2L-207ENST00000397024 KCNQ3O43525 872 aa25.21■■□□□ 1.63
MCF2L-207ENST00000397024 ZPR1O75312 459 aa25.21■■□□□ 1.63
MCF2L-207ENST00000397024 FCHSD2O94868 740 aa25.21■■□□□ 1.63
MCF2L-207ENST00000397024 KCNA3P22001 575 aa25.21■■□□□ 1.63
MCF2L-207ENST00000397024 CANXP27824 592 aaKnown RBP25.2■■□□□ 1.62
MCF2L-207ENST00000397024 NARFQ9UHQ1 456 aa25.2■■□□□ 1.62
MCF2L-207ENST00000397024 POLRMTO00411 1230 aaKnown RBP25.19■■□□□ 1.62
MCF2L-207ENST00000397024 BCL2L12Q9HB09 334 aa25.19■■□□□ 1.62
MCF2L-207ENST00000397024 COL15A1P39059 1388 aa25.18■■□□□ 1.62
MCF2L-207ENST00000397024 HEG1Q9ULI3 1381 aa25.18■■□□□ 1.62
MCF2L-207ENST00000397024 STARD3NLO95772 234 aa25.18■■□□□ 1.62
MCF2L-207ENST00000397024 BCS1LQ9Y276 419 aa25.18■■□□□ 1.62
MCF2L-207ENST00000397024 MCM10Q7L590 875 aa25.17■■□□□ 1.62
MCF2L-207ENST00000397024 EIF5P55010 431 aaKnown RBP25.16■■□□□ 1.62
MCF2L-207ENST00000397024 C1QTNF8P60827 252 aa25.16■■□□□ 1.62
MCF2L-207ENST00000397024 DCTN1Q14203 1278 aa25.16■■□□□ 1.62
MCF2L-207ENST00000397024 NFIXQ14938 502 aa25.16■■□□□ 1.62
MCF2L-207ENST00000397024 ATP10DQ9P241 1426 aa25.16■■□□□ 1.62
MCF2L-207ENST00000397024 BTBD11A6QL63 1104 aa25.15■■□□□ 1.62
MCF2L-207ENST00000397024 FMNL2Q96PY5 1086 aa25.14■■□□□ 1.62
MCF2L-207ENST00000397024 ADCY9O60503 1353 aa25.14■■□□□ 1.61
MCF2L-207ENST00000397024 A1BGP04217 495 aa25.13■■□□□ 1.61
MCF2L-207ENST00000397024 CHRNA5P30532 468 aa25.13■■□□□ 1.61
MCF2L-207ENST00000397024 TEX13AQ9BXU3 409 aaPredicted RBP25.13■■□□□ 1.61
MCF2L-207ENST00000397024 GIGYF1O75420 1035 aaPredicted RBP25.12■■□□□ 1.61
MCF2L-207ENST00000397024 BRCA1P38398 1863 aaKnown RBP25.12■■□□□ 1.61
MCF2L-207ENST00000397024 RTF1Q92541 710 aaKnown RBP25.11■■□□□ 1.61
MCF2L-207ENST00000397024 PRAMEF22A3QJZ6 481 aa25.1■■□□□ 1.61
MCF2L-207ENST00000397024 ARHGAP27Q6ZUM4 889 aa25.1■■□□□ 1.61
MCF2L-207ENST00000397024 PIM2Q9P1W9 311 aa25.1■■□□□ 1.61
MCF2L-207ENST00000397024 TBC1D2BQ9UPU7 963 aa25.1■■□□□ 1.61
MCF2L-207ENST00000397024 USP16Q9Y5T5 823 aa25.1■■□□□ 1.61
MCF2L-207ENST00000397024 AFDNP55196 1824 aaKnown RBP25.09■■□□□ 1.61
MCF2L-207ENST00000397024 HTATSF1O43719 755 aaKnown RBP25.09■■□□□ 1.61
MCF2L-207ENST00000397024 SERPINB2P05120 415 aa25.09■■□□□ 1.61
MCF2L-207ENST00000397024 ZNF526Q8TF50 670 aaPredicted RBP25.09■■□□□ 1.61
MCF2L-207ENST00000397024 A0A087WZG4 1122 aa25.08■■□□□ 1.61
MCF2L-207ENST00000397024 PLEKHF1Q96S99 279 aa25.08■■□□□ 1.61
MCF2L-207ENST00000397024 ZNF330Q9Y3S2 320 aaPredicted RBP25.08■■□□□ 1.61
MCF2L-207ENST00000397024 IL6STP40189 918 aaPredicted RBP25.07■■□□□ 1.6
MCF2L-207ENST00000397024 BICDL1Q6ZP65 573 aa25.07■■□□□ 1.6
MCF2L-207ENST00000397024 PIP4K2AP48426 406 aaPredicted RBP25.06■■□□□ 1.6
MCF2L-207ENST00000397024 TBC1D9BQ66K14 1250 aa25.06■■□□□ 1.6
MCF2L-207ENST00000397024 GPBP1L1Q9HC44 474 aaPredicted RBP25.06■■□□□ 1.6
MCF2L-207ENST00000397024 MIS18AQ9NYP9 233 aa25.06■■□□□ 1.6
MCF2L-207ENST00000397024 DALRD3Q5D0E6 543 aaKnown RBP25.05■■□□□ 1.6
MCF2L-207ENST00000397024 NRXN2Q9P2S2 1712 aa25.05■■□□□ 1.6
MCF2L-207ENST00000397024 DDX10Q13206 875 aaKnown RBP25.04■■□□□ 1.6
MCF2L-207ENST00000397024 TAF7Q15545 349 aaPredicted RBP25.04■■□□□ 1.6
MCF2L-207ENST00000397024 SNRPA1P09661 255 aaKnown RBP25.03■■□□□ 1.6
MCF2L-207ENST00000397024 ARFGEF1Q9Y6D6 1849 aa25.02■■□□□ 1.6
MCF2L-207ENST00000397024 CAMTA2O94983 1202 aa25.02■■□□□ 1.6
MCF2L-207ENST00000397024 CARMIL3Q8ND23 1372 aa25.02■■□□□ 1.6
MCF2L-207ENST00000397024 DLG5Q8TDM6 1919 aa25.02■■□□□ 1.6
MCF2L-207ENST00000397024 SENP3-EIF4A1A0A087X0R7 540 aa25.01■■□□□ 1.59
MCF2L-207ENST00000397024 NFE2L2Q16236 605 aa25■■□□□ 1.59
MCF2L-207ENST00000397024 THUMPD2Q9BTF0 503 aaKnown RBP25■■□□□ 1.59
MCF2L-207ENST00000397024 CEP350Q5VT06 3117 aa24.99■■□□□ 1.59
MCF2L-207ENST00000397024 NBPF26B4DH59 902 aa24.99■■□□□ 1.59
MCF2L-207ENST00000397024 RALBP1Q15311 655 aa24.99■■□□□ 1.59
MCF2L-207ENST00000397024 NBPF10Q6P3W6 841 aaKnown RBP24.99■■□□□ 1.59
MCF2L-207ENST00000397024 CCDC24Q8N4L8 307 aa24.99■■□□□ 1.59
MCF2L-207ENST00000397024 NBPF15Q8N660 670 aa24.99■■□□□ 1.59
MCF2L-207ENST00000397024 NEFMP07197 916 aa24.98■■□□□ 1.59
MCF2L-207ENST00000397024 DZIP3Q86Y13 1208 aaKnown RBP24.98■■□□□ 1.59
MCF2L-207ENST00000397024 SCN7AQ01118 1682 aa24.97■■□□□ 1.59
MCF2L-207ENST00000397024 C9orf131Q5VYM1 1079 aa24.97■■□□□ 1.59
MCF2L-207ENST00000397024 C2CD5Q86YS7 1000 aa24.97■■□□□ 1.59
MCF2L-207ENST00000397024 PRR5LQ6MZQ0 368 aa24.96■■□□□ 1.59
MCF2L-207ENST00000397024 NPM2Q86SE8 214 aaKnown RBP24.96■■□□□ 1.59
MCF2L-207ENST00000397024 KIF3CO14782 793 aa24.95■■□□□ 1.58
MCF2L-207ENST00000397024 H0YIN7 160 aa24.94■■□□□ 1.58
MCF2L-207ENST00000397024 SETDB2Q96T68 719 aa24.94■■□□□ 1.58
MCF2L-207ENST00000397024 ANKRD31Q8N7Z5 1873 aa24.94■■□□□ 1.58
MCF2L-207ENST00000397024 TTLL6Q8N841 843 aa24.93■■□□□ 1.58
MCF2L-207ENST00000397024 BRIP1Q9BX63 1249 aa24.93■■□□□ 1.58
MCF2L-207ENST00000397024 PNNQ9H307 717 aaKnown RBP24.93■■□□□ 1.58
MCF2L-207ENST00000397024 EIF4A1P60842 406 aaKnown RBP24.92■■□□□ 1.58
MCF2L-207ENST00000397024 MAPK8IP3Q9UPT6 1336 aa24.91■■□□□ 1.58
MCF2L-207ENST00000397024 BCORQ6W2J9 1755 aa24.91■■□□□ 1.58
MCF2L-207ENST00000397024 DLEC1Q9Y238 1755 aa24.91■■□□□ 1.58
MCF2L-207ENST00000397024 PNISRQ8TF01 805 aaKnown RBP24.91■■□□□ 1.58
MCF2L-207ENST00000397024 SBF1O95248 1867 aa24.9■■□□□ 1.58
MCF2L-207ENST00000397024 PRELPP51888 382 aa24.9■■□□□ 1.58
MCF2L-207ENST00000397024 RASSF7Q02833 373 aa24.9■■□□□ 1.58
MCF2L-207ENST00000397024 CLEC4GQ6UXB4 293 aa24.9■■□□□ 1.58
MCF2L-207ENST00000397024 RNF181Q9P0P0 153 aa24.9■■□□□ 1.58
MCF2L-207ENST00000397024 KDM3BQ7LBC6 1761 aa24.9■■□□□ 1.58
MCF2L-207ENST00000397024 NMRK2Q9NPI5 230 aa24.89■■□□□ 1.58
MCF2L-207ENST00000397024 PDE6BP35913 854 aa24.88■■□□□ 1.57
MCF2L-207ENST00000397024 RIPK4P57078 832 aa24.88■■□□□ 1.57
MCF2L-207ENST00000397024 CNBD1Q8NA66 436 aa24.88■■□□□ 1.57
MCF2L-207ENST00000397024 ZNF622Q969S3 477 aaKnown RBP eCLIP24.88■■□□□ 1.57
MCF2L-207ENST00000397024 MYBBP1AQ9BQG0 1328 aaKnown RBP24.87■■□□□ 1.57
MCF2L-207ENST00000397024 HLFQ16534 295 aa24.87■■□□□ 1.57
MCF2L-207ENST00000397024 TMPOP42166 694 aaKnown RBP24.86■■□□□ 1.57
MCF2L-207ENST00000397024 NGEFQ8N5V2 710 aa24.86■■□□□ 1.57
MCF2L-207ENST00000397024 PDZRN3Q9UPQ7 1066 aa24.85■■□□□ 1.57
MCF2L-207ENST00000397024 RRP7AQ9Y3A4 280 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms