RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 SIRT2Q8IXJ6 389 aa16.82■□□□□ 0.28
PPARG-206ENST00000397012 MEIS3Q99687 375 aa16.82■□□□□ 0.28
PPARG-206ENST00000397012 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
PPARG-206ENST00000397012 ATP10DQ9P241 1426 aa16.82■□□□□ 0.28
PPARG-206ENST00000397012 FNBP4Q8N3X1 1017 aaPredicted RBP16.82■□□□□ 0.28
PPARG-206ENST00000397012 USP16Q9Y5T5 823 aa16.82■□□□□ 0.28
PPARG-206ENST00000397012 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
PPARG-206ENST00000397012 ANXA1P04083 346 aa16.81■□□□□ 0.28
PPARG-206ENST00000397012 ADCY9O60503 1353 aa16.81■□□□□ 0.28
PPARG-206ENST00000397012 RPAP2Q8IXW5 612 aaPredicted RBP16.8■□□□□ 0.28
PPARG-206ENST00000397012 TMOD3Q9NYL9 352 aa16.8■□□□□ 0.28
PPARG-206ENST00000397012 PDZRN3Q9UPQ7 1066 aa16.8■□□□□ 0.28
PPARG-206ENST00000397012 PI4KAP2A4QPH2 592 aa16.8■□□□□ 0.28
PPARG-206ENST00000397012 LRP10Q7Z4F1 713 aa16.8■□□□□ 0.28
PPARG-206ENST00000397012 PI4KAP1Q8N8J0 262 aa16.8■□□□□ 0.28
PPARG-206ENST00000397012 DNAAF4Q8WXU2 420 aa16.8■□□□□ 0.28
PPARG-206ENST00000397012 VPS72Q15906 364 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 KSR2Q6VAB6 950 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 ANKRD44Q8N8A2 993 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 NGLY1Q96IV0 654 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 ERBB4Q15303 1308 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 BCL9O00512 1426 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 GNAI3P08754 354 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 DDB1Q16531 1140 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 PIGBQ92521 554 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 GCC1Q96CN9 775 aa16.79■□□□□ 0.28
PPARG-206ENST00000397012 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
PPARG-206ENST00000397012 C8orf37Q96NL8 207 aa16.78■□□□□ 0.28
PPARG-206ENST00000397012 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
PPARG-206ENST00000397012 DOT1LQ8TEK3 1739 aa16.78■□□□□ 0.28
PPARG-206ENST00000397012 HSPA1LP34931 641 aa16.77■□□□□ 0.28
PPARG-206ENST00000397012 SRCIN1Q9C0H9 1055 aa16.77■□□□□ 0.28
PPARG-206ENST00000397012 USP44Q9H0E7 712 aa16.77■□□□□ 0.28
PPARG-206ENST00000397012 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.27
PPARG-206ENST00000397012 DDX58O95786 925 aaKnown RBP16.76■□□□□ 0.27
PPARG-206ENST00000397012 GNAI2P04899 355 aa16.76■□□□□ 0.27
PPARG-206ENST00000397012 RGS3P49796 1198 aa16.76■□□□□ 0.27
PPARG-206ENST00000397012 NUCB1Q02818 461 aa16.75■□□□□ 0.27
PPARG-206ENST00000397012 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
PPARG-206ENST00000397012 ATG3Q9NT62 314 aa16.75■□□□□ 0.27
PPARG-206ENST00000397012 MAP3K2Q9Y2U5 619 aa16.75■□□□□ 0.27
PPARG-206ENST00000397012 DCTPP1Q9H773 170 aa16.75■□□□□ 0.27
PPARG-206ENST00000397012 CCDC9Q9Y3X0 531 aaKnown RBP16.75■□□□□ 0.27
PPARG-206ENST00000397012 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
PPARG-206ENST00000397012 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
PPARG-206ENST00000397012 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
PPARG-206ENST00000397012 MYL6BP14649 208 aa16.74■□□□□ 0.27
PPARG-206ENST00000397012 PDE4AP27815 886 aa16.74■□□□□ 0.27
PPARG-206ENST00000397012 MARCH10Q8NA82 808 aaPredicted RBP16.74■□□□□ 0.27
PPARG-206ENST00000397012 BACH2Q9BYV9 841 aa16.74■□□□□ 0.27
PPARG-206ENST00000397012 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
PPARG-206ENST00000397012 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
PPARG-206ENST00000397012 XAGE3Q8WTP9 111 aa16.73■□□□□ 0.27
PPARG-206ENST00000397012 NBPF26B4DH59 902 aa16.72■□□□□ 0.27
PPARG-206ENST00000397012 NBPF14Q5TI25 921 aa16.72■□□□□ 0.27
PPARG-206ENST00000397012 NBPF10Q6P3W6 841 aaKnown RBP16.72■□□□□ 0.27
PPARG-206ENST00000397012 NBPF15Q8N660 670 aa16.72■□□□□ 0.27
PPARG-206ENST00000397012 LINS1Q8NG48 757 aa16.72■□□□□ 0.27
PPARG-206ENST00000397012 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
PPARG-206ENST00000397012 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
PPARG-206ENST00000397012 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
PPARG-206ENST00000397012 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
PPARG-206ENST00000397012 CHD1LQ86WJ1 897 aa16.72■□□□□ 0.27
PPARG-206ENST00000397012 USP21Q9UK80 565 aa16.72■□□□□ 0.27
PPARG-206ENST00000397012 THSD7AQ9UPZ6 1657 aa16.71■□□□□ 0.27
PPARG-206ENST00000397012 HMMRO75330 724 aa16.7■□□□□ 0.26
PPARG-206ENST00000397012 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
PPARG-206ENST00000397012 ATP8B2P98198 1209 aa16.7■□□□□ 0.26
PPARG-206ENST00000397012 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
PPARG-206ENST00000397012 UTYO14607 1347 aa16.7■□□□□ 0.26
PPARG-206ENST00000397012 FAM98CQ17RN3 349 aaKnown RBP16.7■□□□□ 0.26
PPARG-206ENST00000397012 RIC3Q7Z5B4 369 aa16.7■□□□□ 0.26
PPARG-206ENST00000397012 METTL22Q9BUU2 404 aaPredicted RBP16.7■□□□□ 0.26
PPARG-206ENST00000397012 NUP188Q5SRE5 1749 aa16.69■□□□□ 0.26
PPARG-206ENST00000397012 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
PPARG-206ENST00000397012 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
PPARG-206ENST00000397012 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
PPARG-206ENST00000397012 A1BGP04217 495 aa16.69■□□□□ 0.26
PPARG-206ENST00000397012 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
PPARG-206ENST00000397012 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
PPARG-206ENST00000397012 PLBD2Q8NHP8 589 aa16.69■□□□□ 0.26
PPARG-206ENST00000397012 TJP1Q07157 1748 aa16.68■□□□□ 0.26
PPARG-206ENST00000397012 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
PPARG-206ENST00000397012 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
PPARG-206ENST00000397012 CICQ96RK0 1608 aaPredicted RBP16.68■□□□□ 0.26
PPARG-206ENST00000397012 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
PPARG-206ENST00000397012 DNAJC10Q8IXB1 793 aa16.67■□□□□ 0.26
PPARG-206ENST00000397012 SLC4A9Q96Q91 983 aa16.67■□□□□ 0.26
PPARG-206ENST00000397012 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
PPARG-206ENST00000397012 NEXNQ0ZGT2 675 aa16.67■□□□□ 0.26
PPARG-206ENST00000397012 SYTL4Q96C24 671 aaPredicted RBP16.67■□□□□ 0.26
PPARG-206ENST00000397012 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
PPARG-206ENST00000397012 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
PPARG-206ENST00000397012 PNMA6EA0A0J9YXQ4 647 aa16.66■□□□□ 0.26
PPARG-206ENST00000397012 STARD3NLO95772 234 aa16.66■□□□□ 0.26
PPARG-206ENST00000397012 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
PPARG-206ENST00000397012 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
PPARG-206ENST00000397012 NEURL1BA8MQ27 555 aa16.65■□□□□ 0.26
PPARG-206ENST00000397012 GRM8O00222 908 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms