RNA–Protein interactions for RNA: ENST00000396617.7

MKL1-202, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-202ENST00000396617 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
MKL1-202ENST00000396617 KINO60870 393 aaKnown RBP16.93■□□□□ 0.3
MKL1-202ENST00000396617 ALDH1L1O75891 902 aa16.93■□□□□ 0.3
MKL1-202ENST00000396617 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
MKL1-202ENST00000396617 ZNF396Q96N95 335 aaPredicted RBP16.93■□□□□ 0.3
MKL1-202ENST00000396617 CTNNA3Q9UI47 895 aa16.93■□□□□ 0.3
MKL1-202ENST00000396617 GCP02774 474 aa16.93■□□□□ 0.3
MKL1-202ENST00000396617 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
MKL1-202ENST00000396617 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
MKL1-202ENST00000396617 G2E3Q7L622 706 aa16.93■□□□□ 0.3
MKL1-202ENST00000396617 CCDC85AQ96PX6 553 aaPredicted RBP16.93■□□□□ 0.3
MKL1-202ENST00000396617 SH2B1Q9NRF2 756 aaPredicted RBP16.93■□□□□ 0.3
MKL1-202ENST00000396617 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
MKL1-202ENST00000396617 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
MKL1-202ENST00000396617 LTKP29376 864 aa16.92■□□□□ 0.3
MKL1-202ENST00000396617 ESYT1Q9BSJ8 1104 aa16.92■□□□□ 0.3
MKL1-202ENST00000396617 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
MKL1-202ENST00000396617 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
MKL1-202ENST00000396617 TPD52L1Q16890 204 aaPredicted RBP16.92■□□□□ 0.3
MKL1-202ENST00000396617 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
MKL1-202ENST00000396617 MSH6P52701 1360 aa16.92■□□□□ 0.3
MKL1-202ENST00000396617 CEBPZQ03701 1054 aaKnown RBP16.91■□□□□ 0.3
MKL1-202ENST00000396617 FBXW7Q969H0 707 aa16.91■□□□□ 0.3
MKL1-202ENST00000396617 MPHOSPH8Q99549 860 aa16.91■□□□□ 0.3
MKL1-202ENST00000396617 UBE3BQ7Z3V4 1068 aa16.91■□□□□ 0.3
MKL1-202ENST00000396617 CCDC192P0DO97 292 aa16.91■□□□□ 0.3
MKL1-202ENST00000396617 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
MKL1-202ENST00000396617 METP08581 1390 aa16.9■□□□□ 0.3
MKL1-202ENST00000396617 NAT10Q9H0A0 1025 aaKnown RBP16.9■□□□□ 0.3
MKL1-202ENST00000396617 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
MKL1-202ENST00000396617 ESPNB1AK53 854 aa16.9■□□□□ 0.3
MKL1-202ENST00000396617 SYCE3A1L190 88 aa16.9■□□□□ 0.3
MKL1-202ENST00000396617 TPM3P06753 285 aa16.9■□□□□ 0.3
MKL1-202ENST00000396617 STK38Q15208 465 aa16.9■□□□□ 0.3
MKL1-202ENST00000396617 AKAP2Q9Y2D5 859 aa16.9■□□□□ 0.3
MKL1-202ENST00000396617 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
MKL1-202ENST00000396617 ANAPC15P60006 121 aa16.89■□□□□ 0.3
MKL1-202ENST00000396617 RNF17Q9BXT8 1623 aaKnown RBP16.89■□□□□ 0.29
MKL1-202ENST00000396617 ATP5J2-PTCD1G3V325 749 aa16.89■□□□□ 0.29
MKL1-202ENST00000396617 GRM8O00222 908 aa16.89■□□□□ 0.29
MKL1-202ENST00000396617 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
MKL1-202ENST00000396617 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
MKL1-202ENST00000396617 NPHP3Q7Z494 1330 aa16.89■□□□□ 0.29
MKL1-202ENST00000396617 IFIT1P09914 478 aaKnown RBP16.89■□□□□ 0.29
MKL1-202ENST00000396617 LINS1Q8NG48 757 aa16.89■□□□□ 0.29
MKL1-202ENST00000396617 TMX3Q96JJ7 454 aa16.89■□□□□ 0.29
MKL1-202ENST00000396617 SPATA32Q96LK8 384 aa16.89■□□□□ 0.29
MKL1-202ENST00000396617 RBM25P49756 843 aaKnown RBP16.89■□□□□ 0.29
MKL1-202ENST00000396617 MADDQ8WXG6 1647 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 TNMDQ9H2S6 317 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 CLASP1Q7Z460 1538 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 AATKQ6ZMQ8 1374 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 MARCH6O60337 910 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
MKL1-202ENST00000396617 COPS6Q7L5N1 327 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
MKL1-202ENST00000396617 ATP7BP35670 1465 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 METTL24Q5JXM2 366 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 PHAXQ9H814 394 aaKnown RBP16.88■□□□□ 0.29
MKL1-202ENST00000396617 XBP1P17861 261 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 CFAP45Q9UL16 551 aa16.88■□□□□ 0.29
MKL1-202ENST00000396617 KIAA0232Q92628 1395 aa16.87■□□□□ 0.29
MKL1-202ENST00000396617 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
MKL1-202ENST00000396617 GNL3LQ9NVN8 582 aaKnown RBP16.87■□□□□ 0.29
MKL1-202ENST00000396617 KLHL40Q2TBA0 621 aa16.87■□□□□ 0.29
MKL1-202ENST00000396617 R3HCC1Q9Y3T6 440 aaKnown RBP16.87■□□□□ 0.29
MKL1-202ENST00000396617 ABCC4O15439 1325 aa16.86■□□□□ 0.29
MKL1-202ENST00000396617 ZNF592Q92610 1267 aa16.86■□□□□ 0.29
MKL1-202ENST00000396617 ME1P48163 572 aa16.86■□□□□ 0.29
MKL1-202ENST00000396617 PES1O00541 588 aaKnown RBP16.86■□□□□ 0.29
MKL1-202ENST00000396617 DDX11Q96FC9 970 aa16.86■□□□□ 0.29
MKL1-202ENST00000396617 LARP6Q9BRS8 491 aaKnown RBP16.86■□□□□ 0.29
MKL1-202ENST00000396617 E9PCH4 1651 aa16.86■□□□□ 0.29
MKL1-202ENST00000396617 KDM4AO75164 1064 aa16.86■□□□□ 0.29
MKL1-202ENST00000396617 IFIT5Q13325 482 aaKnown RBP16.86■□□□□ 0.29
MKL1-202ENST00000396617 IMMTQ16891 758 aaKnown RBP16.86■□□□□ 0.29
MKL1-202ENST00000396617 CWC25Q9NXE8 425 aaPredicted RBP16.86■□□□□ 0.29
MKL1-202ENST00000396617 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
MKL1-202ENST00000396617 TPM1P09493 284 aa16.85■□□□□ 0.29
MKL1-202ENST00000396617 IDH1O75874 414 aaKnown RBP16.85■□□□□ 0.29
MKL1-202ENST00000396617 OTUD7AQ8TE49 926 aaPredicted RBP16.85■□□□□ 0.29
MKL1-202ENST00000396617 USP26Q9BXU7 913 aa16.85■□□□□ 0.29
MKL1-202ENST00000396617 NUP62CLQ9H1M0 184 aa16.85■□□□□ 0.29
MKL1-202ENST00000396617 RNMTO43148 476 aaKnown RBP16.85■□□□□ 0.29
MKL1-202ENST00000396617 HOXB7P09629 217 aa16.84■□□□□ 0.29
MKL1-202ENST00000396617 JARID2Q92833 1246 aaPredicted RBP16.84■□□□□ 0.29
MKL1-202ENST00000396617 JMYQ8N9B5 988 aa16.84■□□□□ 0.29
MKL1-202ENST00000396617 BRMS1Q9HCU9 246 aa16.84■□□□□ 0.29
MKL1-202ENST00000396617 KIF24Q5T7B8 1368 aa16.84■□□□□ 0.29
MKL1-202ENST00000396617 FAM13BQ9NYF5 915 aa16.84■□□□□ 0.29
MKL1-202ENST00000396617 NUTM2BA6NNL0 878 aaPredicted RBP16.83■□□□□ 0.29
MKL1-202ENST00000396617 NUTM2EB1AL46 878 aaPredicted RBP16.83■□□□□ 0.29
MKL1-202ENST00000396617 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.29
MKL1-202ENST00000396617 HSP90AB3PQ58FF7 597 aa16.83■□□□□ 0.29
MKL1-202ENST00000396617 NUTM2AQ8IVF1 878 aaPredicted RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms