RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ADCY9O60503 1353 aa21.84■■□□□ 1.09
DDR1-229ENST00000396342 POLRMTO00411 1230 aaKnown RBP21.83■■□□□ 1.09
DDR1-229ENST00000396342 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
DDR1-229ENST00000396342 DDR1Q08345 913 aa21.83■■□□□ 1.09
DDR1-229ENST00000396342 ZBTB1Q9Y2K1 713 aa21.83■■□□□ 1.09
DDR1-229ENST00000396342 BTBD11A6QL63 1104 aa21.82■■□□□ 1.08
DDR1-229ENST00000396342 TM4SF1P30408 202 aa21.82■■□□□ 1.08
DDR1-229ENST00000396342 C4AP0C0L4 1744 aa21.82■■□□□ 1.08
DDR1-229ENST00000396342 MRC1P22897 1456 aa21.82■■□□□ 1.08
DDR1-229ENST00000396342 SERPINB2P05120 415 aa21.81■■□□□ 1.08
DDR1-229ENST00000396342 H0YIN7 160 aa21.8■■□□□ 1.08
DDR1-229ENST00000396342 NFIXQ14938 502 aa21.8■■□□□ 1.08
DDR1-229ENST00000396342 C9orf131Q5VYM1 1079 aa21.8■■□□□ 1.08
DDR1-229ENST00000396342 BICDL1Q6ZP65 573 aa21.8■■□□□ 1.08
DDR1-229ENST00000396342 PDZRN3Q9UPQ7 1066 aa21.8■■□□□ 1.08
DDR1-229ENST00000396342 COL5A3P25940 1745 aaPredicted RBP21.8■■□□□ 1.08
DDR1-229ENST00000396342 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
DDR1-229ENST00000396342 HSPA6P17066 643 aa21.79■■□□□ 1.08
DDR1-229ENST00000396342 CHRNA5P30532 468 aa21.79■■□□□ 1.08
DDR1-229ENST00000396342 IL17REQ8NFR9 667 aa21.79■■□□□ 1.08
DDR1-229ENST00000396342 ZNF496Q96IT1 587 aaPredicted RBP21.79■■□□□ 1.08
DDR1-229ENST00000396342 HEG1Q9ULI3 1381 aa21.78■■□□□ 1.08
DDR1-229ENST00000396342 RNF181Q9P0P0 153 aa21.78■■□□□ 1.08
DDR1-229ENST00000396342 SCN11AQ9UI33 1791 aa21.78■■□□□ 1.08
DDR1-229ENST00000396342 IL6STP40189 918 aaPredicted RBP21.77■■□□□ 1.08
DDR1-229ENST00000396342 TTLL6Q8N841 843 aa21.77■■□□□ 1.08
DDR1-229ENST00000396342 PNNQ9H307 717 aaKnown RBP21.77■■□□□ 1.08
DDR1-229ENST00000396342 KCNA3P22001 575 aa21.76■■□□□ 1.07
DDR1-229ENST00000396342 PPP2R1AP30153 589 aa21.76■■□□□ 1.07
DDR1-229ENST00000396342 PDE6BP35913 854 aa21.76■■□□□ 1.07
DDR1-229ENST00000396342 C2CD5Q86YS7 1000 aa21.76■■□□□ 1.07
DDR1-229ENST00000396342 TOMM70O94826 608 aa21.75■■□□□ 1.07
DDR1-229ENST00000396342 EIF5P55010 431 aaKnown RBP21.75■■□□□ 1.07
DDR1-229ENST00000396342 SETDB2Q96T68 719 aa21.75■■□□□ 1.07
DDR1-229ENST00000396342 RSPH6AQ9H0K4 717 aa21.75■■□□□ 1.07
DDR1-229ENST00000396342 HTATSF1O43719 755 aaKnown RBP21.74■■□□□ 1.07
DDR1-229ENST00000396342 ZNF652Q9Y2D9 606 aa21.74■■□□□ 1.07
DDR1-229ENST00000396342 KCPQ6ZWJ8 1503 aa21.74■■□□□ 1.07
DDR1-229ENST00000396342 SNRPA1P09661 255 aaKnown RBP21.73■■□□□ 1.07
DDR1-229ENST00000396342 ST5P78524 1137 aa21.73■■□□□ 1.07
DDR1-229ENST00000396342 PHACTR3Q96KR7 559 aa21.73■■□□□ 1.07
DDR1-229ENST00000396342 TBC1D2BQ9UPU7 963 aa21.73■■□□□ 1.07
DDR1-229ENST00000396342 TJP1Q07157 1748 aa21.72■■□□□ 1.07
DDR1-229ENST00000396342 COL3A1P02461 1466 aaPredicted RBP21.72■■□□□ 1.07
DDR1-229ENST00000396342 KIF3CO14782 793 aa21.72■■□□□ 1.07
DDR1-229ENST00000396342 ZNF622Q969S3 477 aaKnown RBP eCLIP21.72■■□□□ 1.07
DDR1-229ENST00000396342 GOLGB1Q14789 3259 aaKnown RBP21.72■■□□□ 1.07
DDR1-229ENST00000396342 APLP1P51693 650 aa21.71■■□□□ 1.07
DDR1-229ENST00000396342 CARMIL3Q8ND23 1372 aa21.71■■□□□ 1.07
DDR1-229ENST00000396342 MYH14Q7Z406 1995 aaKnown RBP21.7■■□□□ 1.07
DDR1-229ENST00000396342 DZIP3Q86Y13 1208 aaKnown RBP21.7■■□□□ 1.06
DDR1-229ENST00000396342 CNBD1Q8NA66 436 aa21.7■■□□□ 1.06
DDR1-229ENST00000396342 PNISRQ8TF01 805 aaKnown RBP21.7■■□□□ 1.06
DDR1-229ENST00000396342 BRIP1Q9BX63 1249 aa21.7■■□□□ 1.06
DDR1-229ENST00000396342 KIF13BQ9NQT8 1826 aa21.7■■□□□ 1.06
DDR1-229ENST00000396342 CEMIPQ8WUJ3 1361 aa21.7■■□□□ 1.06
DDR1-229ENST00000396342 A1BGP04217 495 aa21.69■■□□□ 1.06
DDR1-229ENST00000396342 LMNB1P20700 586 aa21.69■■□□□ 1.06
DDR1-229ENST00000396342 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
DDR1-229ENST00000396342 MCM10Q7L590 875 aa21.69■■□□□ 1.06
DDR1-229ENST00000396342 BCL2L12Q9HB09 334 aa21.69■■□□□ 1.06
DDR1-229ENST00000396342 ZC3H4Q9UPT8 1303 aaKnown RBP21.69■■□□□ 1.06
DDR1-229ENST00000396342 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
DDR1-229ENST00000396342 NMRK2Q9NPI5 230 aa21.68■■□□□ 1.06
DDR1-229ENST00000396342 MAPK8IP3Q9UPT6 1336 aa21.68■■□□□ 1.06
DDR1-229ENST00000396342 N4BP2Q86UW6 1770 aaPredicted RBP21.68■■□□□ 1.06
DDR1-229ENST00000396342 RBM46Q8TBY0 533 aaKnown RBP21.67■■□□□ 1.06
DDR1-229ENST00000396342 SOGA3Q5TF21 947 aa21.66■■□□□ 1.06
DDR1-229ENST00000396342 DPY19L2Q6NUT2 758 aa21.66■■□□□ 1.06
DDR1-229ENST00000396342 CLEC4GQ6UXB4 293 aa21.66■■□□□ 1.06
DDR1-229ENST00000396342 NBPF5PQ86XG9 351 aaPredicted RBP21.66■■□□□ 1.06
DDR1-229ENST00000396342 CNKSR1Q969H4 720 aa21.66■■□□□ 1.06
DDR1-229ENST00000396342 GTF2E1P29083 439 aaPredicted RBP21.65■■□□□ 1.06
DDR1-229ENST00000396342 ADAMTS7Q9UKP4 1686 aa21.64■■□□□ 1.05
DDR1-229ENST00000396342 FSTL1Q12841 308 aa21.64■■□□□ 1.05
DDR1-229ENST00000396342 PRR5LQ6MZQ0 368 aa21.63■■□□□ 1.05
DDR1-229ENST00000396342 TPTE2Q6XPS3 522 aa21.63■■□□□ 1.05
DDR1-229ENST00000396342 RRAGCQ9HB90 399 aa21.63■■□□□ 1.05
DDR1-229ENST00000396342 USP16Q9Y5T5 823 aa21.63■■□□□ 1.05
DDR1-229ENST00000396342 KCNQ3O43525 872 aa21.62■■□□□ 1.05
DDR1-229ENST00000396342 CAMTA2O94983 1202 aa21.62■■□□□ 1.05
DDR1-229ENST00000396342 RASSF7Q02833 373 aa21.62■■□□□ 1.05
DDR1-229ENST00000396342 ZNF219Q9P2Y4 722 aaPredicted RBP21.62■■□□□ 1.05
DDR1-229ENST00000396342 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
DDR1-229ENST00000396342 RGL2O15211 777 aa21.6■■□□□ 1.05
DDR1-229ENST00000396342 C21orf2O43822 256 aa21.6■■□□□ 1.05
DDR1-229ENST00000396342 VEGFAP15692 232 aaPredicted RBP21.6■■□□□ 1.05
DDR1-229ENST00000396342 STYK1Q6J9G0 422 aa21.6■■□□□ 1.05
DDR1-229ENST00000396342 SMC1BQ8NDV3 1235 aa21.6■■□□□ 1.05
DDR1-229ENST00000396342 MASTLQ96GX5 879 aa21.6■■□□□ 1.05
DDR1-229ENST00000396342 KIAA1551Q9HCM1 1747 aa21.59■■□□□ 1.05
DDR1-229ENST00000396342 NIP7Q9Y221 180 aaKnown RBP eCLIP21.59■■□□□ 1.05
DDR1-229ENST00000396342 GLTPD2A6NH11 291 aa21.58■■□□□ 1.05
DDR1-229ENST00000396342 KIF6Q6ZMV9 814 aa21.58■■□□□ 1.05
DDR1-229ENST00000396342 CCDC24Q8N4L8 307 aa21.58■■□□□ 1.05
DDR1-229ENST00000396342 PIP4K2AP48426 406 aaPredicted RBP21.57■■□□□ 1.04
DDR1-229ENST00000396342 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
DDR1-229ENST00000396342 ERFEQ4G0M1 354 aa21.57■■□□□ 1.04
DDR1-229ENST00000396342 TAOK3Q9H2K8 898 aa21.57■■□□□ 1.04
DDR1-229ENST00000396342 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms