RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 SBNO1A3KN83 1393 aa10.46□□□□□ -0.73
BDNF-204ENST00000395980 SGSM2O43147 1006 aa10.46□□□□□ -0.73
BDNF-204ENST00000395980 ADCY5O95622 1261 aa10.46□□□□□ -0.73
BDNF-204ENST00000395980 USP25Q9UHP3 1055 aa10.46□□□□□ -0.73
BDNF-204ENST00000395980 NCKAP5LQ9HCH0 1330 aa10.46□□□□□ -0.74
BDNF-204ENST00000395980 FLT4P35916 1363 aa10.46□□□□□ -0.74
BDNF-204ENST00000395980 MTHFSDQ2M296 383 aaKnown RBP10.46□□□□□ -0.74
BDNF-204ENST00000395980 HSP90AB2PQ58FF8 381 aa10.46□□□□□ -0.74
BDNF-204ENST00000395980 DNTTIP2Q5QJE6 756 aaKnown RBP10.45□□□□□ -0.74
BDNF-204ENST00000395980 NOL8Q76FK4 1167 aaKnown RBP10.45□□□□□ -0.74
BDNF-204ENST00000395980 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 FUCA2Q9BTY2 467 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 GDPD2Q9HCC8 539 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 STX6O43752 255 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 KDM4AO75164 1064 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 PDIA4P13667 645 aaKnown RBP10.45□□□□□ -0.74
BDNF-204ENST00000395980 UNC5CLQ8IV45 518 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 LIMCH1Q9UPQ0 1083 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 IGSF1Q8N6C5 1336 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 F13A1P00488 732 aa10.45□□□□□ -0.74
BDNF-204ENST00000395980 LRRFIP2Q9Y608 721 aaKnown RBP10.45□□□□□ -0.74
BDNF-204ENST00000395980 SNX14Q9Y5W7 946 aa10.44□□□□□ -0.74
BDNF-204ENST00000395980 ACEP12821 1306 aa10.44□□□□□ -0.74
BDNF-204ENST00000395980 MAP3K5Q99683 1374 aa10.44□□□□□ -0.74
BDNF-204ENST00000395980 POLA2Q14181 598 aa10.44□□□□□ -0.74
BDNF-204ENST00000395980 LSG1Q9H089 658 aaKnown RBP10.44□□□□□ -0.74
BDNF-204ENST00000395980 CNPY2Q9Y2B0 182 aa10.44□□□□□ -0.74
BDNF-204ENST00000395980 USP42Q9H9J4 1324 aaKnown RBP10.44□□□□□ -0.74
BDNF-204ENST00000395980 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
BDNF-204ENST00000395980 UBTFL1P0CB47 393 aaPredicted RBP10.44□□□□□ -0.74
BDNF-204ENST00000395980 UTP14CQ5TAP6 766 aaKnown RBP10.44□□□□□ -0.74
BDNF-204ENST00000395980 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
BDNF-204ENST00000395980 HCLS1P14317 486 aaPredicted RBP10.43□□□□□ -0.74
BDNF-204ENST00000395980 SYT1P21579 422 aa10.43□□□□□ -0.74
BDNF-204ENST00000395980 CNTROBQ8N137 903 aa10.43□□□□□ -0.74
BDNF-204ENST00000395980 PI4K2BQ8TCG2 481 aa10.43□□□□□ -0.74
BDNF-204ENST00000395980 SMC3Q9UQE7 1217 aa10.43□□□□□ -0.74
BDNF-204ENST00000395980 RIMS1Q86UR5 1692 aaKnown RBP10.43□□□□□ -0.74
BDNF-204ENST00000395980 USP44Q9H0E7 712 aa10.43□□□□□ -0.74
BDNF-204ENST00000395980 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.43□□□□□ -0.74
BDNF-204ENST00000395980 ZSCAN31Q96LW9 406 aaPredicted RBP10.43□□□□□ -0.74
BDNF-204ENST00000395980 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
BDNF-204ENST00000395980 KIF3AQ9Y496 699 aa10.43□□□□□ -0.74
BDNF-204ENST00000395980 CHD2O14647 1828 aaKnown RBP10.43□□□□□ -0.74
BDNF-204ENST00000395980 AK2P54819 239 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 KIF1BPQ96EK5 621 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 IL25Q9H293 177 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 ROBO2Q9HCK4 1378 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 GOLGA6L6A8MZA4 724 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 FOXO3O43524 673 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 RUFY3Q7L099 469 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 TM6SF1Q9BZW5 370 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 CEP170BQ9Y4F5 1589 aaPredicted RBP10.42□□□□□ -0.74
BDNF-204ENST00000395980 HSP90AB4PQ58FF6 505 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 PLPPR3Q6T4P5 718 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 TTC12Q9H892 705 aaPredicted RBP10.42□□□□□ -0.74
BDNF-204ENST00000395980 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 KIAA1524Q8TCG1 905 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 RHPN1Q8TCX5 695 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 KCNB2Q92953 911 aa10.42□□□□□ -0.74
BDNF-204ENST00000395980 TTC41PQ6P2S7 1318 aa10.41□□□□□ -0.74
BDNF-204ENST00000395980 CCDC171Q6TFL3 1326 aa10.41□□□□□ -0.74
BDNF-204ENST00000395980 FOXD4L6Q3SYB3 417 aaPredicted RBP10.41□□□□□ -0.74
BDNF-204ENST00000395980 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
BDNF-204ENST00000395980 FOXD4L3Q6VB84 417 aaPredicted RBP10.41□□□□□ -0.74
BDNF-204ENST00000395980 RUFY2Q8WXA3 655 aa10.41□□□□□ -0.74
BDNF-204ENST00000395980 GNAT3A8MTJ3 354 aa10.41□□□□□ -0.74
BDNF-204ENST00000395980 CHMP4AQ9BY43 222 aa10.41□□□□□ -0.74
BDNF-204ENST00000395980 CHAF1AQ13111 956 aaPredicted RBP10.4□□□□□ -0.74
BDNF-204ENST00000395980 ZNF830Q96NB3 372 aaPredicted RBP10.4□□□□□ -0.74
BDNF-204ENST00000395980 MTMR6Q9Y217 621 aa10.4□□□□□ -0.74
BDNF-204ENST00000395980 FIBPO43427 364 aa10.4□□□□□ -0.74
BDNF-204ENST00000395980 CCDC192P0DO97 292 aa10.4□□□□□ -0.74
BDNF-204ENST00000395980 DMTNQ08495 405 aa10.4□□□□□ -0.74
BDNF-204ENST00000395980 IL1RAPL2Q9NP60 686 aa10.4□□□□□ -0.74
BDNF-204ENST00000395980 HYPKQ9NX55 129 aa10.4□□□□□ -0.74
BDNF-204ENST00000395980 ADAMTS13Q76LX8 1427 aa10.4□□□□□ -0.74
BDNF-204ENST00000395980 SURF6O75683 361 aaKnown RBP10.4□□□□□ -0.75
BDNF-204ENST00000395980 PPP1R42Q7Z4L9 355 aa10.4□□□□□ -0.75
BDNF-204ENST00000395980 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.75
BDNF-204ENST00000395980 RASEFQ8IZ41 740 aa10.4□□□□□ -0.75
BDNF-204ENST00000395980 EYA1Q99502 592 aa10.4□□□□□ -0.75
BDNF-204ENST00000395980 ELP1O95163 1332 aa10.39□□□□□ -0.75
BDNF-204ENST00000395980 GLRX3O76003 335 aaKnown RBP10.39□□□□□ -0.75
BDNF-204ENST00000395980 USP54Q70EL1 1684 aa10.39□□□□□ -0.75
BDNF-204ENST00000395980 ADGRL3Q9HAR2 1447 aa10.39□□□□□ -0.75
BDNF-204ENST00000395980 TAF7Q15545 349 aaPredicted RBP10.39□□□□□ -0.75
BDNF-204ENST00000395980 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
BDNF-204ENST00000395980 TMEM2Q9UHN6 1383 aa10.39□□□□□ -0.75
BDNF-204ENST00000395980 HOXB7P09629 217 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 GJB2P29033 226 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 FAM200AQ8TCP9 573 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
BDNF-204ENST00000395980 NWD1Q149M9 1564 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 UBR1Q8IWV7 1749 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 GIMAP6Q6P9H5 292 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 DIP2AQ14689 1571 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 CASTP20810 708 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms