RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 USP16Q9Y5T5 823 aa19.31■□□□□ 0.68
PTPN20-206ENST00000395722 BTAF1O14981 1849 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 RLBP1P12271 317 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 PDIA6Q15084 440 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 FAM182BQ5T319 152 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 G2E3Q7L622 706 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 DBF4Q9UBU7 674 aaPredicted RBP19.3■□□□□ 0.68
PTPN20-206ENST00000395722 ZNF831Q5JPB2 1677 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 TJP1Q07157 1748 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 DZIP1LQ8IYY4 767 aaKnown RBP19.3■□□□□ 0.68
PTPN20-206ENST00000395722 PANK1Q8TE04 598 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 SLC4A9Q96Q91 983 aa19.3■□□□□ 0.68
PTPN20-206ENST00000395722 API5Q9BZZ5 524 aaKnown RBP19.3■□□□□ 0.68
PTPN20-206ENST00000395722 ERBB4Q15303 1308 aa19.29■□□□□ 0.68
PTPN20-206ENST00000395722 SMARCC1Q92922 1105 aaPredicted RBP19.29■□□□□ 0.68
PTPN20-206ENST00000395722 CRBNQ96SW2 442 aa19.29■□□□□ 0.68
PTPN20-206ENST00000395722 DDX21Q9NR30 783 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTPN20-206ENST00000395722 FAM196AQ6ZSG2 479 aa19.28■□□□□ 0.68
PTPN20-206ENST00000395722 TEX13AQ9BXU3 409 aaPredicted RBP19.28■□□□□ 0.68
PTPN20-206ENST00000395722 ABCC4O15439 1325 aa19.28■□□□□ 0.68
PTPN20-206ENST00000395722 FLIIQ13045 1269 aa19.28■□□□□ 0.68
PTPN20-206ENST00000395722 PTF1AQ7RTS3 328 aa19.28■□□□□ 0.68
PTPN20-206ENST00000395722 PALLDQ8WX93 1383 aa19.28■□□□□ 0.68
PTPN20-206ENST00000395722 PROSER3Q2NL68 480 aa19.27■□□□□ 0.68
PTPN20-206ENST00000395722 LRP10Q7Z4F1 713 aa19.27■□□□□ 0.68
PTPN20-206ENST00000395722 ILDR1Q86SU0 546 aaPredicted RBP19.27■□□□□ 0.68
PTPN20-206ENST00000395722 EXOC6Q8TAG9 804 aa19.27■□□□□ 0.68
PTPN20-206ENST00000395722 CLUAP1Q96AJ1 413 aa19.26■□□□□ 0.67
PTPN20-206ENST00000395722 HYPKQ9NX55 129 aa19.26■□□□□ 0.67
PTPN20-206ENST00000395722 DNAJC10Q8IXB1 793 aa19.26■□□□□ 0.67
PTPN20-206ENST00000395722 RBM42Q9BTD8 480 aaKnown RBP19.26■□□□□ 0.67
PTPN20-206ENST00000395722 FTSJ3Q8IY81 847 aaKnown RBP19.25■□□□□ 0.67
PTPN20-206ENST00000395722 BCL11BQ9C0K0 894 aaPredicted RBP19.25■□□□□ 0.67
PTPN20-206ENST00000395722 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
PTPN20-206ENST00000395722 ANXA1P04083 346 aa19.24■□□□□ 0.67
PTPN20-206ENST00000395722 LOC102724428A0A0B4J2F2 783 aa19.24■□□□□ 0.67
PTPN20-206ENST00000395722 SIK1P57059 783 aa19.24■□□□□ 0.67
PTPN20-206ENST00000395722 COG6Q9Y2V7 657 aa19.24■□□□□ 0.67
PTPN20-206ENST00000395722 NBPF26B4DH59 902 aa19.23■□□□□ 0.67
PTPN20-206ENST00000395722 MVPQ14764 893 aaKnown RBP19.23■□□□□ 0.67
PTPN20-206ENST00000395722 NBPF14Q5TI25 921 aa19.23■□□□□ 0.67
PTPN20-206ENST00000395722 NBPF10Q6P3W6 841 aaKnown RBP19.23■□□□□ 0.67
PTPN20-206ENST00000395722 TMEM57Q8N5G2 664 aa19.23■□□□□ 0.67
PTPN20-206ENST00000395722 NBPF15Q8N660 670 aa19.23■□□□□ 0.67
PTPN20-206ENST00000395722 N4BP2Q86UW6 1770 aaPredicted RBP19.23■□□□□ 0.67
PTPN20-206ENST00000395722 LY75O60449 1722 aa19.23■□□□□ 0.67
PTPN20-206ENST00000395722 RREB1Q92766 1687 aa19.23■□□□□ 0.67
PTPN20-206ENST00000395722 PXDNLA1KZ92 1463 aa19.22■□□□□ 0.67
PTPN20-206ENST00000395722 STARD3NLO95772 234 aa19.22■□□□□ 0.67
PTPN20-206ENST00000395722 CYP19A1P11511 503 aaPredicted RBP19.22■□□□□ 0.67
PTPN20-206ENST00000395722 INTS3Q68E01 1043 aaKnown RBP19.22■□□□□ 0.67
PTPN20-206ENST00000395722 FKBP5Q13451 457 aaPredicted RBP19.21■□□□□ 0.67
PTPN20-206ENST00000395722 COL5A3P25940 1745 aaPredicted RBP19.21■□□□□ 0.67
PTPN20-206ENST00000395722 A1BGP04217 495 aa19.21■□□□□ 0.67
PTPN20-206ENST00000395722 ITPK1Q13572 414 aa19.2■□□□□ 0.66
PTPN20-206ENST00000395722 PPP4R2Q9NY27 417 aa19.2■□□□□ 0.66
PTPN20-206ENST00000395722 ADCY9O60503 1353 aa19.2■□□□□ 0.66
PTPN20-206ENST00000395722 ATP6V1AP38606 617 aa19.19■□□□□ 0.66
PTPN20-206ENST00000395722 AAMPQ13685 434 aa19.19■□□□□ 0.66
PTPN20-206ENST00000395722 F6X3S4 739 aa19.19■□□□□ 0.66
PTPN20-206ENST00000395722 MYL6BP14649 208 aa19.19■□□□□ 0.66
PTPN20-206ENST00000395722 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
PTPN20-206ENST00000395722 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
PTPN20-206ENST00000395722 XAGE3Q8WTP9 111 aa19.18■□□□□ 0.66
PTPN20-206ENST00000395722 KSR2Q6VAB6 950 aa19.17■□□□□ 0.66
PTPN20-206ENST00000395722 ITPRIPQ8IWB1 547 aa19.17■□□□□ 0.66
PTPN20-206ENST00000395722 COPS6Q7L5N1 327 aa19.17■□□□□ 0.66
PTPN20-206ENST00000395722 ATP10DQ9P241 1426 aa19.17■□□□□ 0.66
PTPN20-206ENST00000395722 PI4KAP2A4QPH2 592 aa19.16■□□□□ 0.66
PTPN20-206ENST00000395722 TRIM37O94972 964 aa19.16■□□□□ 0.66
PTPN20-206ENST00000395722 DDX58O95786 925 aaKnown RBP19.16■□□□□ 0.66
PTPN20-206ENST00000395722 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
PTPN20-206ENST00000395722 PI4KAP1Q8N8J0 262 aa19.16■□□□□ 0.66
PTPN20-206ENST00000395722 INTS5Q6P9B9 1019 aaKnown RBP19.15■□□□□ 0.66
PTPN20-206ENST00000395722 DNAAF4Q8WXU2 420 aa19.15■□□□□ 0.66
PTPN20-206ENST00000395722 MYH14Q7Z406 1995 aaKnown RBP19.15■□□□□ 0.66
PTPN20-206ENST00000395722 ZBTB7BO15156 539 aaPredicted RBP19.14■□□□□ 0.65
PTPN20-206ENST00000395722 CRKLP46109 303 aaKnown RBP19.14■□□□□ 0.65
PTPN20-206ENST00000395722 CCDC87Q9NVE4 849 aa19.14■□□□□ 0.65
PTPN20-206ENST00000395722 ZBTB1Q9Y2K1 713 aa19.14■□□□□ 0.65
PTPN20-206ENST00000395722 TAF1LQ8IZX4 1826 aa19.14■□□□□ 0.65
PTPN20-206ENST00000395722 NUP188Q5SRE5 1749 aa19.14■□□□□ 0.65
PTPN20-206ENST00000395722 IBTKQ9P2D0 1353 aaPredicted RBP19.14■□□□□ 0.65
PTPN20-206ENST00000395722 AIMP1Q12904 312 aaKnown RBP19.13■□□□□ 0.65
PTPN20-206ENST00000395722 LINC00116Q8NCU8 138 aa19.13■□□□□ 0.65
PTPN20-206ENST00000395722 ZBTB40Q9NUA8 1239 aa19.13■□□□□ 0.65
PTPN20-206ENST00000395722 MAP3K2Q9Y2U5 619 aa19.13■□□□□ 0.65
PTPN20-206ENST00000395722 TNS1Q9HBL0 1735 aaKnown RBP19.13■□□□□ 0.65
PTPN20-206ENST00000395722 ARFGEF2Q9Y6D5 1785 aa19.13■□□□□ 0.65
PTPN20-206ENST00000395722 IL6STP40189 918 aaPredicted RBP19.13■□□□□ 0.65
PTPN20-206ENST00000395722 BEND3Q5T5X7 828 aa19.13■□□□□ 0.65
PTPN20-206ENST00000395722 ANKRD13DQ6ZTN6 518 aa19.13■□□□□ 0.65
PTPN20-206ENST00000395722 CHMP4BQ9H444 224 aaKnown RBP19.13■□□□□ 0.65
PTPN20-206ENST00000395722 CNTNAP4Q9C0A0 1308 aa19.13■□□□□ 0.65
PTPN20-206ENST00000395722 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
PTPN20-206ENST00000395722 TTLL7Q6ZT98 887 aa19.12■□□□□ 0.65
PTPN20-206ENST00000395722 PLBD2Q8NHP8 589 aa19.12■□□□□ 0.65
PTPN20-206ENST00000395722 CCNL1Q9UK58 526 aaPredicted RBP19.12■□□□□ 0.65
PTPN20-206ENST00000395722 RC3H1Q5TC82 1133 aaKnown RBP19.12■□□□□ 0.65
PTPN20-206ENST00000395722 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms